RNA–Protein interactions for RNA: ENST00000447431.6

SRRM1-203, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-203ENST00000447431 CHIC1Q5VXU3 224 aa9.98□□□□□ -0.81
SRRM1-203ENST00000447431 AEBP2Q6ZN18 517 aaPredicted RBP9.9□□□□□ -0.82
SRRM1-203ENST00000447431 PHF23Q9BUL5 403 aaPredicted RBP8.85□□□□□ -0.99
SRRM1-203ENST00000447431 EHMT2Q96KQ7 1210 aa8.85□□□□□ -0.99
SRRM1-203ENST00000447431 NISCHQ9Y2I1 1504 aa8.5□□□□□ -1.05
SRRM1-203ENST00000447431 PLPPR3Q6T4P5 718 aa8.5□□□□□ -1.05
SRRM1-203ENST00000447431 SLC24A1O60721 1099 aa8.47□□□□□ -1.05
SRRM1-203ENST00000447431 SENP3Q9H4L4 574 aaPredicted RBP8.44□□□□□ -1.06
SRRM1-203ENST00000447431 KCNA4P22459 653 aa8.28□□□□□ -1.08
SRRM1-203ENST00000447431 PELP1Q8IZL8 1130 aaKnown RBP8.27□□□□□ -1.09
SRRM1-203ENST00000447431 CSRNP3Q8WYN3 585 aa8.11□□□□□ -1.11
SRRM1-203ENST00000447431 MYT1Q01538 1121 aa8.1□□□□□ -1.11
SRRM1-203ENST00000447431 HRCP23327 699 aa8.06□□□□□ -1.12
SRRM1-203ENST00000447431 SLC4A1APQ9BWU0 796 aaKnown RBP8.06□□□□□ -1.12
SRRM1-203ENST00000447431 RTN4Q9NQC3 1192 aaKnown RBP8.02□□□□□ -1.12
SRRM1-203ENST00000447431 ADRA2BP18089 450 aa8□□□□□ -1.13
SRRM1-203ENST00000447431 AMER1Q5JTC6 1135 aaPredicted RBP7.94□□□□□ -1.14
SRRM1-203ENST00000447431 PCGF6Q9BYE7 350 aa7.91□□□□□ -1.14
SRRM1-203ENST00000447431 SUPT5HO00267 1087 aaKnown RBP7.88□□□□□ -1.15
SRRM1-203ENST00000447431 ZEB1P37275 1124 aaPredicted RBP7.85□□□□□ -1.15
SRRM1-203ENST00000447431 FOXD1Q16676 465 aa7.79□□□□□ -1.16
SRRM1-203ENST00000447431 PPARGC1BQ86YN6 1023 aaKnown RBP7.74□□□□□ -1.17
SRRM1-203ENST00000447431 SHROOM4Q9ULL8 1493 aa7.73□□□□□ -1.17
SRRM1-203ENST00000447431 CENPBP07199 599 aaPredicted RBP7.7□□□□□ -1.18
SRRM1-203ENST00000447431 TRIM26Q12899 539 aaPredicted RBP7.69□□□□□ -1.18
SRRM1-203ENST00000447431 PPP6R1Q9UPN7 881 aa7.66□□□□□ -1.18
SRRM1-203ENST00000447431 NCBP3Q53F19 620 aaKnown RBP7.64□□□□□ -1.19
SRRM1-203ENST00000447431 PPP4R3CPQ6ZMV5 832 aa7.6□□□□□ -1.19
SRRM1-203ENST00000447431 TTBK1Q5TCY1 1321 aaPredicted RBP7.57□□□□□ -1.2
SRRM1-203ENST00000447431 DCAF1Q9Y4B6 1507 aa7.57□□□□□ -1.2
SRRM1-203ENST00000447431 SCAF1Q9H7N4 1312 aaKnown RBP7.56□□□□□ -1.2
SRRM1-203ENST00000447431 ZBTB22O15209 634 aa7.54□□□□□ -1.2
SRRM1-203ENST00000447431 ACIN1Q9UKV3 1341 aaKnown RBP7.52□□□□□ -1.21
SRRM1-203ENST00000447431 PRKCSHP14314 528 aaPredicted RBP7.48□□□□□ -1.21
SRRM1-203ENST00000447431 NPM3O75607 178 aaKnown RBP7.48□□□□□ -1.21
SRRM1-203ENST00000447431 DCAF8L2P0C7V8 631 aa7.47□□□□□ -1.21
SRRM1-203ENST00000447431 GTF3C3Q9Y5Q9 886 aa7.47□□□□□ -1.21
SRRM1-203ENST00000447431 FKBP8Q14318 412 aa7.47□□□□□ -1.21
SRRM1-203ENST00000447431 PIAS4Q8N2W9 510 aaPredicted RBP7.46□□□□□ -1.22
SRRM1-203ENST00000447431 CCER1Q8TC90 406 aaPredicted RBP7.45□□□□□ -1.22
SRRM1-203ENST00000447431 LOC105371045A0A1W2PR82 267 aa7.44□□□□□ -1.22
SRRM1-203ENST00000447431 MYO15BQ96JP2 1530 aa7.42□□□□□ -1.22
SRRM1-203ENST00000447431 CCDC180Q9P1Z9 1646 aa7.42□□□□□ -1.22
SRRM1-203ENST00000447431 DIEXFQ68CQ4 756 aaKnown RBP7.41□□□□□ -1.22
SRRM1-203ENST00000447431 HAP1P54257 671 aaPredicted RBP7.39□□□□□ -1.23
SRRM1-203ENST00000447431 NEUROD1Q13562 356 aa7.38□□□□□ -1.23
SRRM1-203ENST00000447431 FOXD4L1Q9NU39 408 aa7.37□□□□□ -1.23
SRRM1-203ENST00000447431 BCANQ96GW7 911 aa7.35□□□□□ -1.23
SRRM1-203ENST00000447431 TRIM41Q8WV44 630 aa7.34□□□□□ -1.23
SRRM1-203ENST00000447431 YTHDC1Q96MU7 727 aaKnown RBP7.32□□□□□ -1.24
SRRM1-203ENST00000447431 CLSPNQ9HAW4 1339 aa7.31□□□□□ -1.24
SRRM1-203ENST00000447431 TAOK2Q9UL54 1235 aa7.3□□□□□ -1.24
SRRM1-203ENST00000447431 FAM9AQ8IZU1 332 aaPredicted RBP7.29□□□□□ -1.24
SRRM1-203ENST00000447431 PLCB2Q00722 1185 aa7.29□□□□□ -1.24
SRRM1-203ENST00000447431 TPRNQ4KMQ1 711 aa7.29□□□□□ -1.24
SRRM1-203ENST00000447431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.26□□□□□ -1.25
SRRM1-203ENST00000447431 DAXXQ9UER7 740 aaPredicted RBP7.25□□□□□ -1.25
SRRM1-203ENST00000447431 ZNF316A6NFI3 1004 aaPredicted RBP7.24□□□□□ -1.25
SRRM1-203ENST00000447431 ZCCHC6Q5VYS8 1495 aaKnown RBP7.21□□□□□ -1.26
SRRM1-203ENST00000447431 ERICH6Q7L0X2 663 aa7.21□□□□□ -1.26
SRRM1-203ENST00000447431 ANP32EQ9BTT0 268 aa7.19□□□□□ -1.26
SRRM1-203ENST00000447431 CNKSR2Q8WXI2 1034 aa7.17□□□□□ -1.26
SRRM1-203ENST00000447431 TULP1O00294 542 aaPredicted RBP7.17□□□□□ -1.26
SRRM1-203ENST00000447431 NEFLP07196 543 aa7.17□□□□□ -1.26
SRRM1-203ENST00000447431 BCL11AQ9H165 835 aa7.17□□□□□ -1.26
SRRM1-203ENST00000447431 MSH5O43196 834 aa7.15□□□□□ -1.26
SRRM1-203ENST00000447431 APLP2Q06481 763 aa7.13□□□□□ -1.27
SRRM1-203ENST00000447431 TIMELESSQ9UNS1 1208 aa7.12□□□□□ -1.27
SRRM1-203ENST00000447431 MYT1LQ9UL68 1186 aa7.1□□□□□ -1.27
SRRM1-203ENST00000447431 MIER1Q8N108 512 aa7.07□□□□□ -1.28
SRRM1-203ENST00000447431 ARXQ96QS3 562 aa7.06□□□□□ -1.28
SRRM1-203ENST00000447431 VSIG10Q8N0Z9 540 aa7.05□□□□□ -1.28
SRRM1-203ENST00000447431 SUPT16HQ9Y5B9 1047 aaKnown RBP7.03□□□□□ -1.28
SRRM1-203ENST00000447431 UBTFP17480 764 aaKnown RBP7.03□□□□□ -1.28
SRRM1-203ENST00000447431 HNRNPUL2Q1KMD3 747 aaKnown RBP7□□□□□ -1.29
SRRM1-203ENST00000447431 RANGAP1P46060 587 aaPredicted RBP7□□□□□ -1.29
SRRM1-203ENST00000447431 TSHZ2Q9NRE2 1034 aa6.99□□□□□ -1.29
SRRM1-203ENST00000447431 HOMEZQ8IX15 550 aa6.99□□□□□ -1.29
SRRM1-203ENST00000447431 CFAP44Q96MT7 982 aa6.98□□□□□ -1.29
SRRM1-203ENST00000447431 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.97□□□□□ -1.29
SRRM1-203ENST00000447431 CDK11AQ9UQ88 783 aaPredicted RBP6.97□□□□□ -1.29
SRRM1-203ENST00000447431 FBLN2P98095 1184 aa6.94□□□□□ -1.3
SRRM1-203ENST00000447431 RTL5Q5HYW3 569 aaPredicted RBP6.94□□□□□ -1.3
SRRM1-203ENST00000447431 PAXIP1Q6ZW49 1069 aaPredicted RBP6.94□□□□□ -1.3
SRRM1-203ENST00000447431 NBR1Q14596 966 aa6.93□□□□□ -1.3
SRRM1-203ENST00000447431 C14orf37Q86TY3 774 aa6.92□□□□□ -1.3
SRRM1-203ENST00000447431 KDM2AQ9Y2K7 1162 aa6.91□□□□□ -1.3
SRRM1-203ENST00000447431 MYCNP04198 464 aaPredicted RBP6.9□□□□□ -1.31
SRRM1-203ENST00000447431 MAPK8IP2Q13387 824 aaPredicted RBP6.9□□□□□ -1.31
SRRM1-203ENST00000447431 RBM19Q9Y4C8 960 aaKnown RBP6.9□□□□□ -1.31
SRRM1-203ENST00000447431 ATXN8OSP0DMR3 200 aa6.89□□□□□ -1.31
SRRM1-203ENST00000447431 FBXO3Q9UK99 471 aa6.89□□□□□ -1.31
SRRM1-203ENST00000447431 RSF1Q96T23 1441 aaPredicted RBP6.89□□□□□ -1.31
SRRM1-203ENST00000447431 WRNQ14191 1432 aaPredicted RBP eCLIP6.88□□□□□ -1.31
SRRM1-203ENST00000447431 CEP162Q5TB80 1403 aa6.87□□□□□ -1.31
SRRM1-203ENST00000447431 ANP32CO43423 234 aa6.87□□□□□ -1.31
SRRM1-203ENST00000447431 RB1CC1Q8TDY2 1594 aa6.86□□□□□ -1.31
SRRM1-203ENST00000447431 TNIKQ9UKE5 1360 aa6.86□□□□□ -1.31
SRRM1-203ENST00000447431 EEA1Q15075 1411 aa6.84□□□□□ -1.31
SRRM1-203ENST00000447431 ABCC9O60706 1549 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms