RNA–Protein interactions for RNA: ENST00000600410.5

NOP53-212, Transcript of NOP53 ribosome biogenesis factor, humanhuman

TSL 2

Gene NOP53, Length 4,185 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP53-212ENST00000600410 PELP1Q8IZL8 1130 aaKnown RBP27.71■■■□□ 2.03
NOP53-212ENST00000600410 MYT1Q01538 1121 aa27.23■■□□□ 1.95
NOP53-212ENST00000600410 NISCHQ9Y2I1 1504 aa26.96■■□□□ 1.91
NOP53-212ENST00000600410 PCGF6Q9BYE7 350 aa26.79■■□□□ 1.88
NOP53-212ENST00000600410 SUPT5HO00267 1087 aaKnown RBP26.73■■□□□ 1.87
NOP53-212ENST00000600410 HRCP23327 699 aa26.56■■□□□ 1.84
NOP53-212ENST00000600410 CENPBP07199 599 aaPredicted RBP26.21■■□□□ 1.79
NOP53-212ENST00000600410 ZEB1P37275 1124 aaPredicted RBP26.05■■□□□ 1.76
NOP53-212ENST00000600410 PPARGC1BQ86YN6 1023 aaKnown RBP26.04■■□□□ 1.76
NOP53-212ENST00000600410 SHROOM4Q9ULL8 1493 aa25.95■■□□□ 1.74
NOP53-212ENST00000600410 DCAF8L2P0C7V8 631 aa25.92■■□□□ 1.74
NOP53-212ENST00000600410 EHMT2Q96KQ7 1210 aa25.52■■□□□ 1.68
NOP53-212ENST00000600410 YTHDC1Q96MU7 727 aaKnown RBP25.44■■□□□ 1.66
NOP53-212ENST00000600410 TRIM26Q12899 539 aaPredicted RBP25.41■■□□□ 1.66
NOP53-212ENST00000600410 CCER1Q8TC90 406 aaPredicted RBP25.37■■□□□ 1.65
NOP53-212ENST00000600410 ERICH6Q7L0X2 663 aa25.36■■□□□ 1.65
NOP53-212ENST00000600410 GTF3C3Q9Y5Q9 886 aa25.24■■□□□ 1.63
NOP53-212ENST00000600410 TTBK1Q5TCY1 1321 aaPredicted RBP25.12■■□□□ 1.61
NOP53-212ENST00000600410 SCAF1Q9H7N4 1312 aaKnown RBP25.08■■□□□ 1.61
NOP53-212ENST00000600410 FAM9AQ8IZU1 332 aaPredicted RBP25.07■■□□□ 1.6
NOP53-212ENST00000600410 ACIN1Q9UKV3 1341 aaKnown RBP25.03■■□□□ 1.6
NOP53-212ENST00000600410 DIEXFQ68CQ4 756 aaKnown RBP24.88■■□□□ 1.57
NOP53-212ENST00000600410 CHIC1Q5VXU3 224 aa24.87■■□□□ 1.57
NOP53-212ENST00000600410 LOC105371045A0A1W2PR82 267 aa24.84■■□□□ 1.57
NOP53-212ENST00000600410 NEFLP07196 543 aa24.77■■□□□ 1.56
NOP53-212ENST00000600410 NEUROD1Q13562 356 aa24.62■■□□□ 1.53
NOP53-212ENST00000600410 TRIM41Q8WV44 630 aa24.55■■□□□ 1.52
NOP53-212ENST00000600410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.51■■□□□ 1.51
NOP53-212ENST00000600410 APLP2Q06481 763 aa24.49■■□□□ 1.51
NOP53-212ENST00000600410 BCL11AQ9H165 835 aa24.24■■□□□ 1.47
NOP53-212ENST00000600410 BCANQ96GW7 911 aa24.17■■□□□ 1.46
NOP53-212ENST00000600410 RTL5Q5HYW3 569 aaPredicted RBP24.09■■□□□ 1.45
NOP53-212ENST00000600410 ANP32EQ9BTT0 268 aa24.07■■□□□ 1.44
NOP53-212ENST00000600410 ZNF316A6NFI3 1004 aaPredicted RBP24.07■■□□□ 1.44
NOP53-212ENST00000600410 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
NOP53-212ENST00000600410 CLSPNQ9HAW4 1339 aa23.88■■□□□ 1.41
NOP53-212ENST00000600410 UBTFP17480 764 aaKnown RBP23.87■■□□□ 1.41
NOP53-212ENST00000600410 HNRNPUL2Q1KMD3 747 aaKnown RBP23.86■■□□□ 1.41
NOP53-212ENST00000600410 CDK11AQ9UQ88 783 aaPredicted RBP23.77■■□□□ 1.39
NOP53-212ENST00000600410 RANGAP1P46060 587 aaPredicted RBP23.76■■□□□ 1.39
NOP53-212ENST00000600410 EIF5BO60841 1220 aaKnown RBP23.72■■□□□ 1.39
NOP53-212ENST00000600410 MYT1LQ9UL68 1186 aa23.69■■□□□ 1.38
NOP53-212ENST00000600410 DAXXQ9UER7 740 aaPredicted RBP23.67■■□□□ 1.38
NOP53-212ENST00000600410 FKBP8Q14318 412 aa23.62■■□□□ 1.37
NOP53-212ENST00000600410 MIER1Q8N108 512 aa23.6■■□□□ 1.37
NOP53-212ENST00000600410 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
NOP53-212ENST00000600410 CSRNP3Q8WYN3 585 aa23.51■■□□□ 1.35
NOP53-212ENST00000600410 NBR1Q14596 966 aa23.39■■□□□ 1.34
NOP53-212ENST00000600410 SUPT16HQ9Y5B9 1047 aaKnown RBP23.33■■□□□ 1.33
NOP53-212ENST00000600410 CCDC180Q9P1Z9 1646 aa23.33■■□□□ 1.33
NOP53-212ENST00000600410 ITGAEP38570 1179 aa23.33■■□□□ 1.32
NOP53-212ENST00000600410 ANP32AP39687 249 aaKnown RBP23.3■■□□□ 1.32
NOP53-212ENST00000600410 GLIPR1L2Q4G1C9 344 aa23.3■■□□□ 1.32
NOP53-212ENST00000600410 ANP32CO43423 234 aa23.23■■□□□ 1.31
NOP53-212ENST00000600410 TSHZ2Q9NRE2 1034 aa23.18■■□□□ 1.3
NOP53-212ENST00000600410 PRKCSHP14314 528 aaPredicted RBP23.13■■□□□ 1.29
NOP53-212ENST00000600410 RTN4Q9NQC3 1192 aaKnown RBP23.08■■□□□ 1.29
NOP53-212ENST00000600410 DEKP35659 375 aaKnown RBP23.08■■□□□ 1.29
NOP53-212ENST00000600410 ATP1B4Q9UN42 357 aaPredicted RBP23.08■■□□□ 1.29
NOP53-212ENST00000600410 CNGB1Q14028 1251 aaPredicted RBP23.07■■□□□ 1.28
NOP53-212ENST00000600410 RBM19Q9Y4C8 960 aaKnown RBP23.06■■□□□ 1.28
NOP53-212ENST00000600410 ZBTB47Q9UFB7 747 aaPredicted RBP23.04■■□□□ 1.28
NOP53-212ENST00000600410 NPM2Q86SE8 214 aaKnown RBP23.04■■□□□ 1.28
NOP53-212ENST00000600410 TRIM52Q96A61 297 aa23.03■■□□□ 1.28
NOP53-212ENST00000600410 POLR3GLQ9BT43 218 aa22.94■■□□□ 1.26
NOP53-212ENST00000600410 DDX10Q13206 875 aaKnown RBP22.9■■□□□ 1.26
NOP53-212ENST00000600410 IRX6P78412 446 aaPredicted RBP22.9■■□□□ 1.26
NOP53-212ENST00000600410 HNRNPUQ00839 825 aaKnown RBP eCLIP22.89■■□□□ 1.25
NOP53-212ENST00000600410 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.8■■□□□ 1.24
NOP53-212ENST00000600410 NOP58Q9Y2X3 529 aaKnown RBP22.75■■□□□ 1.23
NOP53-212ENST00000600410 CCDC136Q96JN2 1154 aa22.74■■□□□ 1.23
NOP53-212ENST00000600410 ZCCHC6Q5VYS8 1495 aaKnown RBP22.73■■□□□ 1.23
NOP53-212ENST00000600410 NEFMP07197 916 aa22.69■■□□□ 1.22
NOP53-212ENST00000600410 ERICH6BQ5W0A0 696 aa22.66■■□□□ 1.22
NOP53-212ENST00000600410 ANO8Q9HCE9 1232 aaPredicted RBP22.57■■□□□ 1.2
NOP53-212ENST00000600410 FAM50AQ14320 339 aaKnown RBP22.55■■□□□ 1.2
NOP53-212ENST00000600410 FAM9BQ8IZU0 186 aa22.52■■□□□ 1.2
NOP53-212ENST00000600410 LAS1LQ9Y4W2 734 aaKnown RBP22.5■■□□□ 1.19
NOP53-212ENST00000600410 ARXQ96QS3 562 aa22.5■■□□□ 1.19
NOP53-212ENST00000600410 PPM1GO15355 546 aaPredicted RBP22.48■■□□□ 1.19
NOP53-212ENST00000600410 PPP4R2Q9NY27 417 aa22.48■■□□□ 1.19
NOP53-212ENST00000600410 HIRIP3Q9BW71 556 aaPredicted RBP22.41■■□□□ 1.18
NOP53-212ENST00000600410 B4GALNT3Q6L9W6 998 aa22.39■■□□□ 1.17
NOP53-212ENST00000600410 NAP1L5Q96NT1 182 aaPredicted RBP22.38■■□□□ 1.17
NOP53-212ENST00000600410 FANCIQ9NVI1 1328 aa22.32■■□□□ 1.16
NOP53-212ENST00000600410 DDRGK1Q96HY6 314 aa22.31■■□□□ 1.16
NOP53-212ENST00000600410 SALL2Q9Y467 1007 aaPredicted RBP22.3■■□□□ 1.16
NOP53-212ENST00000600410 ANP32BQ92688 251 aaKnown RBP22.3■■□□□ 1.16
NOP53-212ENST00000600410 MRS2Q9HD23 443 aa22.29■■□□□ 1.16
NOP53-212ENST00000600410 TONSLQ96HA7 1378 aa22.22■■□□□ 1.15
NOP53-212ENST00000600410 VSIG10Q8N0Z9 540 aa22.2■■□□□ 1.14
NOP53-212ENST00000600410 IPO9Q96P70 1041 aaKnown RBP22.15■■□□□ 1.14
NOP53-212ENST00000600410 TRIM44Q96DX7 344 aaPredicted RBP22.14■■□□□ 1.13
NOP53-212ENST00000600410 PKNOX2Q96KN3 472 aa22.13■■□□□ 1.13
NOP53-212ENST00000600410 KCNH8Q96L42 1107 aa22.1■■□□□ 1.13
NOP53-212ENST00000600410 RSPH6AQ9H0K4 717 aa22.1■■□□□ 1.13
NOP53-212ENST00000600410 UPF2Q9HAU5 1272 aaKnown RBP22.1■■□□□ 1.13
NOP53-212ENST00000600410 HSP90AA1P07900 732 aaKnown RBP22.1■■□□□ 1.13
NOP53-212ENST00000600410 CEP162Q5TB80 1403 aa22.09■■□□□ 1.13
NOP53-212ENST00000600410 CCER2I3L3R5 266 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms