RNA–Protein interactions for RNA: ENST00000477127.5

CCNL1-219, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 1,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-219ENST00000477127 NISCHQ9Y2I1 1504 aa33.4■■■□□ 2.94
CCNL1-219ENST00000477127 ABCC9O60706 1549 aa30.03■■■□□ 2.4
CCNL1-219ENST00000477127 CCDC180Q9P1Z9 1646 aa30■■■□□ 2.39
CCNL1-219ENST00000477127 RB1CC1Q8TDY2 1594 aa28.62■■■□□ 2.17
CCNL1-219ENST00000477127 NACADO15069 1562 aa28.42■■■□□ 2.14
CCNL1-219ENST00000477127 DCAF8L2P0C7V8 631 aa28.22■■■□□ 2.11
CCNL1-219ENST00000477127 DNAJC5BQ9UF47 199 aa28.22■■■□□ 2.11
CCNL1-219ENST00000477127 MYO15BQ96JP2 1530 aa28.06■■■□□ 2.08
CCNL1-219ENST00000477127 PABPN1Q86U42 306 aaKnown RBP eCLIP27.95■■■□□ 2.06
CCNL1-219ENST00000477127 UNC13AQ9UPW8 1703 aa27.83■■■□□ 2.05
CCNL1-219ENST00000477127 BICRAQ9NZM4 1560 aa27.71■■■□□ 2.03
CCNL1-219ENST00000477127 ZCCHC6Q5VYS8 1495 aaKnown RBP27.65■■■□□ 2.02
CCNL1-219ENST00000477127 DCAF1Q9Y4B6 1507 aa27.64■■■□□ 2.01
CCNL1-219ENST00000477127 SHROOM4Q9ULL8 1493 aa27.47■■□□□ 1.99
CCNL1-219ENST00000477127 SCRIBQ14160 1630 aa27.26■■□□□ 1.95
CCNL1-219ENST00000477127 CC2D2AQ9P2K1 1620 aa27.13■■□□□ 1.93
CCNL1-219ENST00000477127 CECR2Q9BXF3 1484 aa27.09■■□□□ 1.93
CCNL1-219ENST00000477127 EIF4G1Q04637 1599 aaKnown RBP27.07■■□□□ 1.92
CCNL1-219ENST00000477127 AEBP2Q6ZN18 517 aaPredicted RBP26.32■■□□□ 1.8
CCNL1-219ENST00000477127 NCAPD3P42695 1498 aa26.25■■□□□ 1.79
CCNL1-219ENST00000477127 ATAD2BQ9ULI0 1458 aa26.11■■□□□ 1.77
CCNL1-219ENST00000477127 SMARCA2P51531 1590 aa26.07■■□□□ 1.76
CCNL1-219ENST00000477127 DNAJC5Q9H3Z4 198 aa26.06■■□□□ 1.76
CCNL1-219ENST00000477127 SMARCA4P51532 1647 aa26.04■■□□□ 1.76
CCNL1-219ENST00000477127 HMGXB3Q12766 1538 aa26.02■■□□□ 1.76
CCNL1-219ENST00000477127 CUX2O14529 1486 aa26■■□□□ 1.75
CCNL1-219ENST00000477127 ERCC6Q03468 1493 aa25.98■■□□□ 1.75
CCNL1-219ENST00000477127 BAZ1AQ9NRL2 1556 aaPredicted RBP25.95■■□□□ 1.75
CCNL1-219ENST00000477127 BAZ1BQ9UIG0 1483 aaKnown RBP25.86■■□□□ 1.73
CCNL1-219ENST00000477127 PEG3Q9GZU2 1588 aa25.84■■□□□ 1.73
CCNL1-219ENST00000477127 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
CCNL1-219ENST00000477127 NESP48681 1621 aa25.75■■□□□ 1.71
CCNL1-219ENST00000477127 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
CCNL1-219ENST00000477127 LAMC3Q9Y6N6 1575 aa25.65■■□□□ 1.7
CCNL1-219ENST00000477127 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
CCNL1-219ENST00000477127 THOC2Q8NI27 1593 aaKnown RBP25.52■■□□□ 1.68
CCNL1-219ENST00000477127 CADPSQ9ULU8 1353 aa25.44■■□□□ 1.66
CCNL1-219ENST00000477127 KIF21AQ7Z4S6 1674 aa25.39■■□□□ 1.66
CCNL1-219ENST00000477127 WIZO95785 1651 aa25.35■■□□□ 1.65
CCNL1-219ENST00000477127 MRC2Q9UBG0 1479 aa25.27■■□□□ 1.64
CCNL1-219ENST00000477127 WDR62O43379 1518 aa25.19■■□□□ 1.62
CCNL1-219ENST00000477127 RSF1Q96T23 1441 aaPredicted RBP25.17■■□□□ 1.62
CCNL1-219ENST00000477127 CEP164Q9UPV0 1460 aa25.17■■□□□ 1.62
CCNL1-219ENST00000477127 CFTRP13569 1480 aa25.13■■□□□ 1.61
CCNL1-219ENST00000477127 FANCD2Q9BXW9 1451 aa25.12■■□□□ 1.61
CCNL1-219ENST00000477127 TOP2AP11388 1531 aaKnown RBP25.08■■□□□ 1.61
CCNL1-219ENST00000477127 URB2Q14146 1524 aaKnown RBP24.88■■□□□ 1.57
CCNL1-219ENST00000477127 OSCARQ8IYS5 282 aa24.83■■□□□ 1.56
CCNL1-219ENST00000477127 TRIM41Q8WV44 630 aa24.83■■□□□ 1.56
CCNL1-219ENST00000477127 CCDC88BA6NC98 1476 aa24.8■■□□□ 1.56
CCNL1-219ENST00000477127 PRDM2Q13029 1718 aa24.78■■□□□ 1.56
CCNL1-219ENST00000477127 IFT140Q96RY7 1462 aa24.68■■□□□ 1.54
CCNL1-219ENST00000477127 ABCC8Q09428 1581 aa24.66■■□□□ 1.54
CCNL1-219ENST00000477127 TOPBP1Q92547 1522 aa24.62■■□□□ 1.53
CCNL1-219ENST00000477127 ZNF608Q9ULD9 1512 aaPredicted RBP24.57■■□□□ 1.52
CCNL1-219ENST00000477127 DNMBPQ6XZF7 1577 aa24.53■■□□□ 1.52
CCNL1-219ENST00000477127 EIF4G3O43432 1585 aaKnown RBP24.44■■□□□ 1.5
CCNL1-219ENST00000477127 RIMBP3CA6NJZ7 1639 aa24.4■■□□□ 1.5
CCNL1-219ENST00000477127 RIMBP3BA6NNM3 1639 aa24.4■■□□□ 1.5
CCNL1-219ENST00000477127 RIMBP3Q9UFD9 1639 aa24.4■■□□□ 1.5
CCNL1-219ENST00000477127 TARBP1Q13395 1621 aaKnown RBP24.39■■□□□ 1.49
CCNL1-219ENST00000477127 AQRO60306 1485 aaKnown RBP eCLIP24.37■■□□□ 1.492e-8■■■■■ 42.1
CCNL1-219ENST00000477127 POLA1P09884 1462 aaPredicted RBP24.37■■□□□ 1.49
CCNL1-219ENST00000477127 ARHGEF11O15085 1522 aa24.34■■□□□ 1.49
CCNL1-219ENST00000477127 SOGA1O94964 1423 aa24.29■■□□□ 1.48
CCNL1-219ENST00000477127 FBLN2P98095 1184 aa24.26■■□□□ 1.47
CCNL1-219ENST00000477127 RAD54L2Q9Y4B4 1467 aa24.24■■□□□ 1.47
CCNL1-219ENST00000477127 CHD1O14646 1710 aa24.23■■□□□ 1.47
CCNL1-219ENST00000477127 WDR97A6NE52 1622 aa24.22■■□□□ 1.47
CCNL1-219ENST00000477127 TDRD9Q8NDG6 1382 aaKnown RBP24.21■■□□□ 1.47
CCNL1-219ENST00000477127 CYB5RLQ6IPT4 315 aa24.19■■□□□ 1.46
CCNL1-219ENST00000477127 FGD5Q6ZNL6 1462 aa24.19■■□□□ 1.46
CCNL1-219ENST00000477127 CUX1P39880 1505 aa24.14■■□□□ 1.45
CCNL1-219ENST00000477127 SNAPC4Q5SXM2 1469 aa24.11■■□□□ 1.45
CCNL1-219ENST00000477127 CHMP7Q8WUX9 453 aaPredicted RBP24.11■■□□□ 1.45
CCNL1-219ENST00000477127 MAGI1Q96QZ7 1491 aaPredicted RBP24.1■■□□□ 1.45
CCNL1-219ENST00000477127 GRIN2BQ13224 1484 aa24.09■■□□□ 1.45
CCNL1-219ENST00000477127 ARAP1Q96P48 1450 aa24.08■■□□□ 1.45
CCNL1-219ENST00000477127 SYNJ1O43426 1573 aa24.03■■□□□ 1.44
CCNL1-219ENST00000477127 SYNJ2O15056 1496 aa24.02■■□□□ 1.43
CCNL1-219ENST00000477127 CLASP1Q7Z460 1538 aa24.01■■□□□ 1.43
CCNL1-219ENST00000477127 GAPVD1Q14C86 1478 aa23.99■■□□□ 1.43
CCNL1-219ENST00000477127 SUPT5HO00267 1087 aaKnown RBP23.98■■□□□ 1.43
CCNL1-219ENST00000477127 TRHP20396 242 aaPredicted RBP23.97■■□□□ 1.43
CCNL1-219ENST00000477127 ABCA10Q8WWZ4 1543 aa23.95■■□□□ 1.42
CCNL1-219ENST00000477127 PBRM1Q86U86 1689 aa23.89■■□□□ 1.42
CCNL1-219ENST00000477127 WRNQ14191 1432 aaPredicted RBP eCLIP23.88■■□□□ 1.412e-6■■■■□ 22.3
CCNL1-219ENST00000477127 ABCA5Q8WWZ7 1642 aa23.87■■□□□ 1.41
CCNL1-219ENST00000477127 TOP2BQ02880 1626 aa23.77■■□□□ 1.39
CCNL1-219ENST00000477127 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
CCNL1-219ENST00000477127 BIVM-ERCC5R4GMW8 1640 aa23.74■■□□□ 1.39
CCNL1-219ENST00000477127 FHAD1B1AJZ9 1412 aa23.7■■□□□ 1.38
CCNL1-219ENST00000477127 ADAMTS12P58397 1594 aa23.69■■□□□ 1.38
CCNL1-219ENST00000477127 NUP160Q12769 1436 aa23.69■■□□□ 1.38
CCNL1-219ENST00000477127 ERICH3Q5RHP9 1530 aa23.66■■□□□ 1.38
CCNL1-219ENST00000477127 CEP170Q5SW79 1584 aa23.63■■□□□ 1.37
CCNL1-219ENST00000477127 ERCC6L2Q5T890 1561 aa23.57■■□□□ 1.36
CCNL1-219ENST00000477127 SHROOM2Q13796 1616 aa23.56■■□□□ 1.36
CCNL1-219ENST00000477127 JPH4Q96JJ6 628 aa23.49■■□□□ 1.35
CCNL1-219ENST00000477127 PRG4Q92954 1404 aaPredicted RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms