RNA–Protein interactions for RNA: ENST00000619580.4

PTMS-207, Transcript of parathymosin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTMS, Length 1,150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-207ENST00000619580 NISCHQ9Y2I1 1504 aa50.16■■■■■ 5.62
PTMS-207ENST00000619580 ABCC9O60706 1549 aa46.27■■■■■ 5
PTMS-207ENST00000619580 CCDC180Q9P1Z9 1646 aa45.07■■■■■ 4.81
PTMS-207ENST00000619580 DNAJC5BQ9UF47 199 aa44.36■■■■■ 4.69
PTMS-207ENST00000619580 RB1CC1Q8TDY2 1594 aa43.48■■■■■ 4.55
PTMS-207ENST00000619580 PABPN1Q86U42 306 aaKnown RBP eCLIP43.03■■■■■ 4.481e-9■□□□□ 8.1
PTMS-207ENST00000619580 NACADO15069 1562 aa42.92■■■■■ 4.46
PTMS-207ENST00000619580 DCAF8L2P0C7V8 631 aa42.83■■■■■ 4.45
PTMS-207ENST00000619580 UNC13AQ9UPW8 1703 aa42.41■■■■■ 4.38
PTMS-207ENST00000619580 BICRAQ9NZM4 1560 aa42.26■■■■■ 4.36
PTMS-207ENST00000619580 MYO15BQ96JP2 1530 aa41.95■■■■■ 4.31
PTMS-207ENST00000619580 CECR2Q9BXF3 1484 aa41.75■■■■■ 4.27
PTMS-207ENST00000619580 ZCCHC6Q5VYS8 1495 aaKnown RBP41.74■■■■■ 4.27
PTMS-207ENST00000619580 CC2D2AQ9P2K1 1620 aa41.66■■■■■ 4.26
PTMS-207ENST00000619580 DCAF1Q9Y4B6 1507 aa41.54■■■■■ 4.24
PTMS-207ENST00000619580 SHROOM4Q9ULL8 1493 aa41.48■■■■■ 4.23
PTMS-207ENST00000619580 DNAJC5Q9H3Z4 198 aa41.41■■■■■ 4.22
PTMS-207ENST00000619580 EIF4G1Q04637 1599 aaKnown RBP41.31■■■■■ 4.2
PTMS-207ENST00000619580 SCRIBQ14160 1630 aa41.16■■■■■ 4.18
PTMS-207ENST00000619580 CUX2O14529 1486 aa40.17■■■■■ 4.02
PTMS-207ENST00000619580 ERCC6Q03468 1493 aa40■■■■□ 3.99
PTMS-207ENST00000619580 NCAPD3P42695 1498 aa39.69■■■■□ 3.94
PTMS-207ENST00000619580 NESP48681 1621 aa39.46■■■■□ 3.91
PTMS-207ENST00000619580 ATAD2BQ9ULI0 1458 aa39.45■■■■□ 3.91
PTMS-207ENST00000619580 TRIM41Q8WV44 630 aa39.29■■■■□ 3.88
PTMS-207ENST00000619580 SMARCA2P51531 1590 aa39.23■■■■□ 3.87
PTMS-207ENST00000619580 HMGXB3Q12766 1538 aa39.23■■■■□ 3.87
PTMS-207ENST00000619580 THOC2Q8NI27 1593 aaKnown RBP39.12■■■■□ 3.85
PTMS-207ENST00000619580 SMARCA4P51532 1647 aa39.11■■■■□ 3.85
PTMS-207ENST00000619580 BAZ1BQ9UIG0 1483 aaKnown RBP39.02■■■■□ 3.84
PTMS-207ENST00000619580 BAZ1AQ9NRL2 1556 aaPredicted RBP38.93■■■■□ 3.82
PTMS-207ENST00000619580 LAMC3Q9Y6N6 1575 aa38.9■■■■□ 3.82
PTMS-207ENST00000619580 PDS5BQ9NTI5 1447 aa38.8■■■■□ 3.8
PTMS-207ENST00000619580 KIF21AQ7Z4S6 1674 aa38.79■■■■□ 3.8
PTMS-207ENST00000619580 PEG3Q9GZU2 1588 aa38.68■■■■□ 3.78
PTMS-207ENST00000619580 MROH2BQ7Z745 1585 aa38.64■■■■□ 3.78
PTMS-207ENST00000619580 MRC2Q9UBG0 1479 aa38.49■■■■□ 3.75
PTMS-207ENST00000619580 CADPSQ9ULU8 1353 aa38.48■■■■□ 3.75
PTMS-207ENST00000619580 WDR62O43379 1518 aa38.38■■■■□ 3.74
PTMS-207ENST00000619580 OSCARQ8IYS5 282 aa38.32■■■■□ 3.72
PTMS-207ENST00000619580 WIZO95785 1651 aa38.24■■■■□ 3.71
PTMS-207ENST00000619580 CEP164Q9UPV0 1460 aa38.15■■■■□ 3.7
PTMS-207ENST00000619580 RSF1Q96T23 1441 aaPredicted RBP38.05■■■■□ 3.68
PTMS-207ENST00000619580 FANCD2Q9BXW9 1451 aa38.04■■■■□ 3.68
PTMS-207ENST00000619580 TOP2AP11388 1531 aaKnown RBP37.82■■■■□ 3.65
PTMS-207ENST00000619580 RIMBP3CA6NJZ7 1639 aa37.81■■■■□ 3.64
PTMS-207ENST00000619580 RIMBP3BA6NNM3 1639 aa37.81■■■■□ 3.64
PTMS-207ENST00000619580 RIMBP3Q9UFD9 1639 aa37.81■■■■□ 3.64
PTMS-207ENST00000619580 CFTRP13569 1480 aa37.79■■■■□ 3.64
PTMS-207ENST00000619580 URB2Q14146 1524 aaKnown RBP37.78■■■■□ 3.64
PTMS-207ENST00000619580 ARHGEF11O15085 1522 aa37.61■■■■□ 3.61
PTMS-207ENST00000619580 CYB5RLQ6IPT4 315 aa37.55■■■■□ 3.6
PTMS-207ENST00000619580 ZNF608Q9ULD9 1512 aaPredicted RBP37.51■■■■□ 3.6
PTMS-207ENST00000619580 TRHP20396 242 aaPredicted RBP37.48■■■■□ 3.59
PTMS-207ENST00000619580 IFT140Q96RY7 1462 aa37.42■■■■□ 3.58
PTMS-207ENST00000619580 CCDC88BA6NC98 1476 aa37.33■■■■□ 3.57
PTMS-207ENST00000619580 PRDM2Q13029 1718 aa37.27■■■■□ 3.56
PTMS-207ENST00000619580 TOPBP1Q92547 1522 aa37.19■■■■□ 3.54
PTMS-207ENST00000619580 ARAP1Q96P48 1450 aa37.19■■■■□ 3.54
PTMS-207ENST00000619580 EIF4G3O43432 1585 aaKnown RBP37.16■■■■□ 3.54
PTMS-207ENST00000619580 FBLN2P98095 1184 aa37.15■■■■□ 3.54
PTMS-207ENST00000619580 AEBP2Q6ZN18 517 aaPredicted RBP37.1■■■■□ 3.53
PTMS-207ENST00000619580 AQRO60306 1485 aaKnown RBP eCLIP37.09■■■■□ 3.531e-7■■■□□ 18.9
PTMS-207ENST00000619580 CHD1O14646 1710 aa37.05■■■■□ 3.52
PTMS-207ENST00000619580 ABCC8Q09428 1581 aa37■■■■□ 3.51
PTMS-207ENST00000619580 DNMBPQ6XZF7 1577 aa36.91■■■■□ 3.5
PTMS-207ENST00000619580 TARBP1Q13395 1621 aaKnown RBP36.88■■■■□ 3.5
PTMS-207ENST00000619580 SUPT5HO00267 1087 aaKnown RBP36.75■■■■□ 3.47
PTMS-207ENST00000619580 POLA1P09884 1462 aaPredicted RBP36.75■■■■□ 3.47
PTMS-207ENST00000619580 TDRD9Q8NDG6 1382 aaKnown RBP36.73■■■■□ 3.47
PTMS-207ENST00000619580 RAD54L2Q9Y4B4 1467 aa36.7■■■■□ 3.47
PTMS-207ENST00000619580 CHMP7Q8WUX9 453 aaPredicted RBP36.65■■■■□ 3.46
PTMS-207ENST00000619580 SOGA1O94964 1423 aa36.63■■■■□ 3.45
PTMS-207ENST00000619580 SNAPC4Q5SXM2 1469 aa36.62■■■■□ 3.45
PTMS-207ENST00000619580 CLASP1Q7Z460 1538 aa36.62■■■■□ 3.45
PTMS-207ENST00000619580 SYNJ1O43426 1573 aa36.53■■■■□ 3.44
PTMS-207ENST00000619580 MAGI1Q96QZ7 1491 aaPredicted RBP36.43■■■■□ 3.42
PTMS-207ENST00000619580 FGD5Q6ZNL6 1462 aa36.39■■■■□ 3.42
PTMS-207ENST00000619580 GAPVD1Q14C86 1478 aa36.38■■■■□ 3.41
PTMS-207ENST00000619580 GRIN2BQ13224 1484 aa36.37■■■■□ 3.41
PTMS-207ENST00000619580 WDR97A6NE52 1622 aa36.35■■■■□ 3.41
PTMS-207ENST00000619580 SYNJ2O15056 1496 aa36.35■■■■□ 3.41
PTMS-207ENST00000619580 CUX1P39880 1505 aa36.28■■■■□ 3.4
PTMS-207ENST00000619580 ERCC6L2Q5T890 1561 aa36.06■■■■□ 3.36
PTMS-207ENST00000619580 PBRM1Q86U86 1689 aa36.06■■■■□ 3.36
PTMS-207ENST00000619580 BIVM-ERCC5R4GMW8 1640 aa35.95■■■■□ 3.35
PTMS-207ENST00000619580 TOP2BQ02880 1626 aa35.92■■■■□ 3.34
PTMS-207ENST00000619580 WRNQ14191 1432 aaPredicted RBP eCLIP35.91■■■■□ 3.347e-8■■■■■ 32.7
PTMS-207ENST00000619580 GRIN2AQ12879 1464 aa35.89■■■■□ 3.34
PTMS-207ENST00000619580 ABCA10Q8WWZ4 1543 aa35.88■■■■□ 3.33
PTMS-207ENST00000619580 ABCA5Q8WWZ7 1642 aa35.87■■■■□ 3.33
PTMS-207ENST00000619580 CEP170Q5SW79 1584 aa35.87■■■■□ 3.33
PTMS-207ENST00000619580 NUP160Q12769 1436 aa35.79■■■■□ 3.32
PTMS-207ENST00000619580 KIF13AQ9H1H9 1805 aa35.75■■■■□ 3.31
PTMS-207ENST00000619580 ADAMTS12P58397 1594 aa35.69■■■■□ 3.3
PTMS-207ENST00000619580 FAM69CQ0P6D2 419 aa35.68■■■■□ 3.3
PTMS-207ENST00000619580 SHROOM2Q13796 1616 aa35.68■■■■□ 3.3
PTMS-207ENST00000619580 FHAD1B1AJZ9 1412 aa35.62■■■■□ 3.29
PTMS-207ENST00000619580 PRG4Q92954 1404 aaPredicted RBP35.61■■■■□ 3.29
PTMS-207ENST00000619580 KDM4FA0A1W2PPD8 638 aa35.58■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms