RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 NISCHQ9Y2I1 1504 aa28.02■■■□□ 2.08
SCAP-208ENST00000448217 CCDC180Q9P1Z9 1646 aa24.7■■□□□ 1.54
SCAP-208ENST00000448217 ABCC9O60706 1549 aa23.49■■□□□ 1.35
SCAP-208ENST00000448217 ZCCHC6Q5VYS8 1495 aaKnown RBP23.47■■□□□ 1.35
SCAP-208ENST00000448217 DCAF1Q9Y4B6 1507 aa23.29■■□□□ 1.32
SCAP-208ENST00000448217 MYO15BQ96JP2 1530 aa23.2■■□□□ 1.3
SCAP-208ENST00000448217 NACADO15069 1562 aa23.07■■□□□ 1.28
SCAP-208ENST00000448217 DCAF8L2P0C7V8 631 aa22.98■■□□□ 1.27
SCAP-208ENST00000448217 RB1CC1Q8TDY2 1594 aa22.93■■□□□ 1.26
SCAP-208ENST00000448217 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
SCAP-208ENST00000448217 UNC13AQ9UPW8 1703 aa22.43■■□□□ 1.18
SCAP-208ENST00000448217 SHROOM4Q9ULL8 1493 aa22.3■■□□□ 1.16
SCAP-208ENST00000448217 BICRAQ9NZM4 1560 aa22.23■■□□□ 1.15
SCAP-208ENST00000448217 PABPN1Q86U42 306 aaKnown RBP eCLIP22.01■■□□□ 1.11
SCAP-208ENST00000448217 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
SCAP-208ENST00000448217 BAZ1AQ9NRL2 1556 aaPredicted RBP21.68■■□□□ 1.06
SCAP-208ENST00000448217 SMARCA4P51532 1647 aa21.61■■□□□ 1.05
SCAP-208ENST00000448217 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
SCAP-208ENST00000448217 MROH2BQ7Z745 1585 aa21.57■■□□□ 1.04
SCAP-208ENST00000448217 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
SCAP-208ENST00000448217 PEG3Q9GZU2 1588 aa21.46■■□□□ 1.03
SCAP-208ENST00000448217 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
SCAP-208ENST00000448217 WIZO95785 1651 aa21.35■■□□□ 1.01
SCAP-208ENST00000448217 ATAD2BQ9ULI0 1458 aa21.35■■□□□ 1.01
SCAP-208ENST00000448217 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1
SCAP-208ENST00000448217 NCAPD3P42695 1498 aa21.29■■□□□ 1
SCAP-208ENST00000448217 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
SCAP-208ENST00000448217 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
SCAP-208ENST00000448217 TOP2AP11388 1531 aaKnown RBP21.2■□□□□ 0.98
SCAP-208ENST00000448217 BAZ1BQ9UIG0 1483 aaKnown RBP21.18■□□□□ 0.98
SCAP-208ENST00000448217 DNAJC5BQ9UF47 199 aa21.05■□□□□ 0.96
SCAP-208ENST00000448217 CCDC88BA6NC98 1476 aa20.92■□□□□ 0.94
SCAP-208ENST00000448217 CFTRP13569 1480 aa20.68■□□□□ 0.9
SCAP-208ENST00000448217 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
SCAP-208ENST00000448217 LAMC3Q9Y6N6 1575 aa20.62■□□□□ 0.89
SCAP-208ENST00000448217 PRDM2Q13029 1718 aa20.59■□□□□ 0.89
SCAP-208ENST00000448217 NESP48681 1621 aa20.5■□□□□ 0.87
SCAP-208ENST00000448217 PDS5BQ9NTI5 1447 aa20.43■□□□□ 0.86
SCAP-208ENST00000448217 FANCD2Q9BXW9 1451 aa20.4■□□□□ 0.86
SCAP-208ENST00000448217 KIF21AQ7Z4S6 1674 aa20.32■□□□□ 0.84
SCAP-208ENST00000448217 CEP164Q9UPV0 1460 aa20.31■□□□□ 0.84
SCAP-208ENST00000448217 CHIC1Q5VXU3 224 aa20.3■□□□□ 0.84
SCAP-208ENST00000448217 ABCC8Q09428 1581 aa20.29■□□□□ 0.84
SCAP-208ENST00000448217 WRNQ14191 1432 aaPredicted RBP eCLIP20.28■□□□□ 0.84
SCAP-208ENST00000448217 BIVM-ERCC5R4GMW8 1640 aa20.22■□□□□ 0.83
SCAP-208ENST00000448217 TOP2BQ02880 1626 aa20.21■□□□□ 0.83
SCAP-208ENST00000448217 CUX1P39880 1505 aa20.21■□□□□ 0.83
SCAP-208ENST00000448217 SYNJ1O43426 1573 aa20.2■□□□□ 0.82
SCAP-208ENST00000448217 ERCC6Q03468 1493 aa20.19■□□□□ 0.82
SCAP-208ENST00000448217 DNMBPQ6XZF7 1577 aa20.19■□□□□ 0.82
SCAP-208ENST00000448217 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
SCAP-208ENST00000448217 URB2Q14146 1524 aaKnown RBP20.17■□□□□ 0.82
SCAP-208ENST00000448217 TOPBP1Q92547 1522 aa20.15■□□□□ 0.82
SCAP-208ENST00000448217 THOC2Q8NI27 1593 aaKnown RBP20.13■□□□□ 0.81
SCAP-208ENST00000448217 TRIM41Q8WV44 630 aa20.13■□□□□ 0.81
SCAP-208ENST00000448217 WDR62O43379 1518 aa20.12■□□□□ 0.81
SCAP-208ENST00000448217 FGD5Q6ZNL6 1462 aa20.04■□□□□ 0.8
SCAP-208ENST00000448217 POLA1P09884 1462 aaPredicted RBP20.01■□□□□ 0.79
SCAP-208ENST00000448217 CUX2O14529 1486 aa19.93■□□□□ 0.78
SCAP-208ENST00000448217 SOGA1O94964 1423 aa19.92■□□□□ 0.78
SCAP-208ENST00000448217 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
SCAP-208ENST00000448217 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
SCAP-208ENST00000448217 IFT140Q96RY7 1462 aa19.9■□□□□ 0.78
SCAP-208ENST00000448217 WDR97A6NE52 1622 aa19.9■□□□□ 0.78
SCAP-208ENST00000448217 RAD54L2Q9Y4B4 1467 aa19.88■□□□□ 0.77
SCAP-208ENST00000448217 EEA1Q15075 1411 aa19.86■□□□□ 0.77
SCAP-208ENST00000448217 KIF27Q86VH2 1401 aa19.82■□□□□ 0.76
SCAP-208ENST00000448217 ABCA5Q8WWZ7 1642 aa19.78■□□□□ 0.76
SCAP-208ENST00000448217 RUSC2Q8N2Y8 1516 aa19.77■□□□□ 0.76
SCAP-208ENST00000448217 GAPVD1Q14C86 1478 aa19.72■□□□□ 0.75
SCAP-208ENST00000448217 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
SCAP-208ENST00000448217 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
SCAP-208ENST00000448217 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
SCAP-208ENST00000448217 ERICH3Q5RHP9 1530 aa19.69■□□□□ 0.74
SCAP-208ENST00000448217 EIF4G3O43432 1585 aaKnown RBP19.68■□□□□ 0.74
SCAP-208ENST00000448217 IGF1RP08069 1367 aa19.68■□□□□ 0.74
SCAP-208ENST00000448217 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.741e-6■■■■■ 30.9
SCAP-208ENST00000448217 GRIN2BQ13224 1484 aa19.65■□□□□ 0.74
SCAP-208ENST00000448217 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
SCAP-208ENST00000448217 FAM9AQ8IZU1 332 aaPredicted RBP19.62■□□□□ 0.73
SCAP-208ENST00000448217 CUL7Q14999 1698 aa19.62■□□□□ 0.73
SCAP-208ENST00000448217 PRXQ9BXM0 1461 aa19.61■□□□□ 0.73
SCAP-208ENST00000448217 KIF21BO75037 1637 aa19.61■□□□□ 0.73
SCAP-208ENST00000448217 CARMIL1Q5VZK9 1371 aa19.56■□□□□ 0.72
SCAP-208ENST00000448217 MAGI1Q96QZ7 1491 aaPredicted RBP19.55■□□□□ 0.72
SCAP-208ENST00000448217 ADAMTS12P58397 1594 aa19.53■□□□□ 0.72
SCAP-208ENST00000448217 FHAD1B1AJZ9 1412 aa19.52■□□□□ 0.72
SCAP-208ENST00000448217 RAPGEF2Q9Y4G8 1499 aa19.51■□□□□ 0.71
SCAP-208ENST00000448217 GOLGA3Q08378 1498 aa19.5■□□□□ 0.71
SCAP-208ENST00000448217 SNAPC4Q5SXM2 1469 aa19.5■□□□□ 0.71
SCAP-208ENST00000448217 SYNJ2O15056 1496 aa19.46■□□□□ 0.71
SCAP-208ENST00000448217 LOC105371045A0A1W2PR82 267 aa19.39■□□□□ 0.69
SCAP-208ENST00000448217 GRIN2AQ12879 1464 aa19.39■□□□□ 0.69
SCAP-208ENST00000448217 TNIKQ9UKE5 1360 aa19.38■□□□□ 0.69
SCAP-208ENST00000448217 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
SCAP-208ENST00000448217 CHD1O14646 1710 aa19.32■□□□□ 0.68
SCAP-208ENST00000448217 NUP160Q12769 1436 aa19.32■□□□□ 0.68
SCAP-208ENST00000448217 CTTNBP2Q8WZ74 1663 aa19.31■□□□□ 0.68
SCAP-208ENST00000448217 UBTFP17480 764 aaKnown RBP19.31■□□□□ 0.68
SCAP-208ENST00000448217 KIAA0586Q9BVV6 1533 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms