RNA–Protein interactions for RNA: ENST00000416847.5

SCAP-204, Transcript of SREBF chaperone, humanhuman

TSL 3

Gene SCAP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-204ENST00000416847 NISCHQ9Y2I1 1504 aa50.59■■■■■ 5.69
SCAP-204ENST00000416847 ABCC9O60706 1549 aa45.74■■■■■ 4.91
SCAP-204ENST00000416847 CCDC180Q9P1Z9 1646 aa45.41■■■■■ 4.86
SCAP-204ENST00000416847 RB1CC1Q8TDY2 1594 aa43.31■■■■■ 4.52
SCAP-204ENST00000416847 DNAJC5BQ9UF47 199 aa43.04■■■■■ 4.48
SCAP-204ENST00000416847 NACADO15069 1562 aa42.94■■■■■ 4.46
SCAP-204ENST00000416847 DCAF8L2P0C7V8 631 aa42.85■■■■■ 4.45
SCAP-204ENST00000416847 PABPN1Q86U42 306 aaKnown RBP eCLIP42.57■■■■■ 4.41
SCAP-204ENST00000416847 UNC13AQ9UPW8 1703 aa42.47■■■■■ 4.39
SCAP-204ENST00000416847 MYO15BQ96JP2 1530 aa42.2■■■■■ 4.35
SCAP-204ENST00000416847 BICRAQ9NZM4 1560 aa42.17■■■■■ 4.34
SCAP-204ENST00000416847 ZCCHC6Q5VYS8 1495 aaKnown RBP41.93■■■■■ 4.3
SCAP-204ENST00000416847 DCAF1Q9Y4B6 1507 aa41.66■■■■■ 4.26
SCAP-204ENST00000416847 SCRIBQ14160 1630 aa41.57■■■■■ 4.25
SCAP-204ENST00000416847 SHROOM4Q9ULL8 1493 aa41.34■■■■■ 4.21
SCAP-204ENST00000416847 CC2D2AQ9P2K1 1620 aa41.26■■■■■ 4.19
SCAP-204ENST00000416847 CECR2Q9BXF3 1484 aa41.14■■■■■ 4.18
SCAP-204ENST00000416847 EIF4G1Q04637 1599 aaKnown RBP41.11■■■■■ 4.17
SCAP-204ENST00000416847 NCAPD3P42695 1498 aa39.64■■■■□ 3.94
SCAP-204ENST00000416847 ATAD2BQ9ULI0 1458 aa39.59■■■■□ 3.93
SCAP-204ENST00000416847 SMARCA4P51532 1647 aa39.54■■■■□ 3.92
SCAP-204ENST00000416847 DNAJC5Q9H3Z4 198 aa39.45■■■■□ 3.91
SCAP-204ENST00000416847 ERCC6Q03468 1493 aa39.43■■■■□ 3.9
SCAP-204ENST00000416847 SMARCA2P51531 1590 aa39.4■■■■□ 3.9
SCAP-204ENST00000416847 HMGXB3Q12766 1538 aa39.38■■■■□ 3.89
SCAP-204ENST00000416847 CUX2O14529 1486 aa39.3■■■■□ 3.88
SCAP-204ENST00000416847 NESP48681 1621 aa39.28■■■■□ 3.88
SCAP-204ENST00000416847 BAZ1AQ9NRL2 1556 aaPredicted RBP39.25■■■■□ 3.87
SCAP-204ENST00000416847 BAZ1BQ9UIG0 1483 aaKnown RBP39.21■■■■□ 3.87
SCAP-204ENST00000416847 MROH2BQ7Z745 1585 aa39.07■■■■□ 3.84
SCAP-204ENST00000416847 PEG3Q9GZU2 1588 aa39.06■■■■□ 3.84
SCAP-204ENST00000416847 THOC2Q8NI27 1593 aaKnown RBP38.86■■■■□ 3.81
SCAP-204ENST00000416847 LAMC3Q9Y6N6 1575 aa38.8■■■■□ 3.8
SCAP-204ENST00000416847 KIF21AQ7Z4S6 1674 aa38.74■■■■□ 3.79
SCAP-204ENST00000416847 WIZO95785 1651 aa38.62■■■■□ 3.77
SCAP-204ENST00000416847 PDS5BQ9NTI5 1447 aa38.55■■■■□ 3.76
SCAP-204ENST00000416847 CADPSQ9ULU8 1353 aa38.46■■■■□ 3.75
SCAP-204ENST00000416847 MRC2Q9UBG0 1479 aa38.31■■■■□ 3.72
SCAP-204ENST00000416847 WDR62O43379 1518 aa38.23■■■■□ 3.71
SCAP-204ENST00000416847 RSF1Q96T23 1441 aaPredicted RBP38.15■■■■□ 3.7
SCAP-204ENST00000416847 CEP164Q9UPV0 1460 aa38.13■■■■□ 3.69
SCAP-204ENST00000416847 FANCD2Q9BXW9 1451 aa38.09■■■■□ 3.69
SCAP-204ENST00000416847 TOP2AP11388 1531 aaKnown RBP38.04■■■■□ 3.68
SCAP-204ENST00000416847 CFTRP13569 1480 aa38.01■■■■□ 3.67
SCAP-204ENST00000416847 TRIM41Q8WV44 630 aa37.85■■■■□ 3.65
SCAP-204ENST00000416847 URB2Q14146 1524 aaKnown RBP37.84■■■■□ 3.65
SCAP-204ENST00000416847 PRDM2Q13029 1718 aa37.64■■■■□ 3.62
SCAP-204ENST00000416847 CCDC88BA6NC98 1476 aa37.63■■■■□ 3.61
SCAP-204ENST00000416847 OSCARQ8IYS5 282 aa37.46■■■■□ 3.59
SCAP-204ENST00000416847 ZNF608Q9ULD9 1512 aaPredicted RBP37.43■■■■□ 3.58
SCAP-204ENST00000416847 TOPBP1Q92547 1522 aa37.37■■■■□ 3.57
SCAP-204ENST00000416847 IFT140Q96RY7 1462 aa37.33■■■■□ 3.57
SCAP-204ENST00000416847 EIF4G3O43432 1585 aaKnown RBP37.2■■■■□ 3.55
SCAP-204ENST00000416847 DNMBPQ6XZF7 1577 aa37.2■■■■□ 3.55
SCAP-204ENST00000416847 RIMBP3CA6NJZ7 1639 aa37.15■■■■□ 3.54
SCAP-204ENST00000416847 RIMBP3BA6NNM3 1639 aa37.15■■■■□ 3.54
SCAP-204ENST00000416847 RIMBP3Q9UFD9 1639 aa37.15■■■■□ 3.54
SCAP-204ENST00000416847 ABCC8Q09428 1581 aa37.09■■■■□ 3.53
SCAP-204ENST00000416847 TARBP1Q13395 1621 aaKnown RBP37.05■■■■□ 3.52
SCAP-204ENST00000416847 AQRO60306 1485 aaKnown RBP eCLIP37.04■■■■□ 3.521e-6■■■■■ 30.9
SCAP-204ENST00000416847 ARHGEF11O15085 1522 aa37■■■■□ 3.51
SCAP-204ENST00000416847 POLA1P09884 1462 aaPredicted RBP36.99■■■■□ 3.51
SCAP-204ENST00000416847 CHD1O14646 1710 aa36.96■■■■□ 3.51
SCAP-204ENST00000416847 RAD54L2Q9Y4B4 1467 aa36.92■■■■□ 3.5
SCAP-204ENST00000416847 FBLN2P98095 1184 aa36.81■■■■□ 3.48
SCAP-204ENST00000416847 TDRD9Q8NDG6 1382 aaKnown RBP36.78■■■■□ 3.48
SCAP-204ENST00000416847 SOGA1O94964 1423 aa36.76■■■■□ 3.47
SCAP-204ENST00000416847 FGD5Q6ZNL6 1462 aa36.75■■■■□ 3.47
SCAP-204ENST00000416847 CUX1P39880 1505 aa36.72■■■■□ 3.47
SCAP-204ENST00000416847 CYB5RLQ6IPT4 315 aa36.71■■■■□ 3.47
SCAP-204ENST00000416847 SNAPC4Q5SXM2 1469 aa36.67■■■■□ 3.46
SCAP-204ENST00000416847 ARAP1Q96P48 1450 aa36.66■■■■□ 3.46
SCAP-204ENST00000416847 WDR97A6NE52 1622 aa36.5■■■■□ 3.43
SCAP-204ENST00000416847 CLASP1Q7Z460 1538 aa36.48■■■■□ 3.43
SCAP-204ENST00000416847 GRIN2BQ13224 1484 aa36.44■■■■□ 3.42
SCAP-204ENST00000416847 SUPT5HO00267 1087 aaKnown RBP36.44■■■■□ 3.42
SCAP-204ENST00000416847 MAGI1Q96QZ7 1491 aaPredicted RBP36.43■■■■□ 3.42
SCAP-204ENST00000416847 CHMP7Q8WUX9 453 aaPredicted RBP36.43■■■■□ 3.42
SCAP-204ENST00000416847 PBRM1Q86U86 1689 aa36.39■■■■□ 3.42
SCAP-204ENST00000416847 SYNJ1O43426 1573 aa36.39■■■■□ 3.42
SCAP-204ENST00000416847 TRHP20396 242 aaPredicted RBP36.36■■■■□ 3.41
SCAP-204ENST00000416847 SYNJ2O15056 1496 aa36.35■■■■□ 3.41
SCAP-204ENST00000416847 GAPVD1Q14C86 1478 aa36.32■■■■□ 3.41
SCAP-204ENST00000416847 ABCA5Q8WWZ7 1642 aa36.27■■■■□ 3.4
SCAP-204ENST00000416847 ABCA10Q8WWZ4 1543 aa36.25■■■■□ 3.39
SCAP-204ENST00000416847 WRNQ14191 1432 aaPredicted RBP eCLIP36.04■■■■□ 3.36
SCAP-204ENST00000416847 ADAMTS12P58397 1594 aa36.03■■■■□ 3.36
SCAP-204ENST00000416847 BIVM-ERCC5R4GMW8 1640 aa36.03■■■■□ 3.36
SCAP-204ENST00000416847 ERCC6L2Q5T890 1561 aa36.02■■■■□ 3.36
SCAP-204ENST00000416847 GRIN2AQ12879 1464 aa36.02■■■■□ 3.36
SCAP-204ENST00000416847 TOP2BQ02880 1626 aa36.01■■■■□ 3.36
SCAP-204ENST00000416847 CEP170Q5SW79 1584 aa35.97■■■■□ 3.35
SCAP-204ENST00000416847 NUP160Q12769 1436 aa35.88■■■■□ 3.33
SCAP-204ENST00000416847 FHAD1B1AJZ9 1412 aa35.82■■■■□ 3.32
SCAP-204ENST00000416847 ERICH3Q5RHP9 1530 aa35.77■■■■□ 3.32
SCAP-204ENST00000416847 SHROOM2Q13796 1616 aa35.75■■■■□ 3.31
SCAP-204ENST00000416847 PRG4Q92954 1404 aaPredicted RBP35.57■■■■□ 3.29
SCAP-204ENST00000416847 RUSC2Q8N2Y8 1516 aa35.53■■■■□ 3.28
SCAP-204ENST00000416847 JPH4Q96JJ6 628 aa35.47■■■■□ 3.27
SCAP-204ENST00000416847 KIF13AQ9H1H9 1805 aa35.4■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms