RNA–Protein interactions for RNA: ENST00000538617.5

UBC-206, Transcript of ubiquitin C, humanhuman

TSL 5 BASIC

Gene UBC, Length 1,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-206ENST00000538617 NISCHQ9Y2I1 1504 aa44.18■■■■■ 4.66
UBC-206ENST00000538617 CCDC180Q9P1Z9 1646 aa39.32■■■■□ 3.89
UBC-206ENST00000538617 ABCC9O60706 1549 aa38.51■■■■□ 3.76
UBC-206ENST00000538617 RB1CC1Q8TDY2 1594 aa36.99■■■■□ 3.51
UBC-206ENST00000538617 DCAF8L2P0C7V8 631 aa36.95■■■■□ 3.51
UBC-206ENST00000538617 NACADO15069 1562 aa36.9■■■■□ 3.5
UBC-206ENST00000538617 ZCCHC6Q5VYS8 1495 aaKnown RBP36.82■■■■□ 3.49
UBC-206ENST00000538617 MYO15BQ96JP2 1530 aa36.61■■■■□ 3.45
UBC-206ENST00000538617 DCAF1Q9Y4B6 1507 aa36.48■■■■□ 3.43
UBC-206ENST00000538617 UNC13AQ9UPW8 1703 aa36.27■■■■□ 3.4
UBC-206ENST00000538617 SCRIBQ14160 1630 aa35.98■■■■□ 3.35
UBC-206ENST00000538617 PABPN1Q86U42 306 aaKnown RBP eCLIP35.96■■■■□ 3.35
UBC-206ENST00000538617 BICRAQ9NZM4 1560 aa35.9■■■■□ 3.34
UBC-206ENST00000538617 SHROOM4Q9ULL8 1493 aa35.39■■■■□ 3.26
UBC-206ENST00000538617 DNAJC5BQ9UF47 199 aa35.27■■■■□ 3.24
UBC-206ENST00000538617 EIF4G1Q04637 1599 aaKnown RBP34.94■■■■□ 3.18
UBC-206ENST00000538617 CC2D2AQ9P2K1 1620 aa34.83■■■■□ 3.17
UBC-206ENST00000538617 CECR2Q9BXF3 1484 aa34.55■■■■□ 3.12
UBC-206ENST00000538617 SMARCA4P51532 1647 aa34.34■■■■□ 3.09
UBC-206ENST00000538617 BAZ1AQ9NRL2 1556 aaPredicted RBP34.25■■■■□ 3.07
UBC-206ENST00000538617 MROH2BQ7Z745 1585 aa34.1■■■■□ 3.05
UBC-206ENST00000538617 ATAD2BQ9ULI0 1458 aa34.09■■■■□ 3.05
UBC-206ENST00000538617 SMARCA2P51531 1590 aa34.05■■■■□ 3.04
UBC-206ENST00000538617 NCAPD3P42695 1498 aa34.01■■■■□ 3.04
UBC-206ENST00000538617 PEG3Q9GZU2 1588 aa33.92■■■■□ 3.02
UBC-206ENST00000538617 HMGXB3Q12766 1538 aa33.91■■■■□ 3.02
UBC-206ENST00000538617 BAZ1BQ9UIG0 1483 aaKnown RBP33.85■■■■□ 3.01
UBC-206ENST00000538617 WIZO95785 1651 aa33.78■■■■□ 3
UBC-206ENST00000538617 RSF1Q96T23 1441 aaPredicted RBP33.66■■■□□ 2.98
UBC-206ENST00000538617 TOP2AP11388 1531 aaKnown RBP33.36■■■□□ 2.93
UBC-206ENST00000538617 NESP48681 1621 aa33.33■■■□□ 2.93
UBC-206ENST00000538617 LAMC3Q9Y6N6 1575 aa33.18■■■□□ 2.9
UBC-206ENST00000538617 ERCC6Q03468 1493 aa33.17■■■□□ 2.9
UBC-206ENST00000538617 CADPSQ9ULU8 1353 aa33.03■■■□□ 2.88
UBC-206ENST00000538617 KIF21AQ7Z4S6 1674 aa33■■■□□ 2.87
UBC-206ENST00000538617 CCDC88BA6NC98 1476 aa32.95■■■□□ 2.86
UBC-206ENST00000538617 PDS5BQ9NTI5 1447 aa32.91■■■□□ 2.86
UBC-206ENST00000538617 SUPT5HO00267 1087 aaKnown RBP32.86■■■□□ 2.85
UBC-206ENST00000538617 CFTRP13569 1480 aa32.86■■■□□ 2.85
UBC-206ENST00000538617 THOC2Q8NI27 1593 aaKnown RBP32.83■■■□□ 2.85
UBC-206ENST00000538617 PRDM2Q13029 1718 aa32.75■■■□□ 2.83
UBC-206ENST00000538617 CUX2O14529 1486 aa32.75■■■□□ 2.83
UBC-206ENST00000538617 FANCD2Q9BXW9 1451 aa32.72■■■□□ 2.83
UBC-206ENST00000538617 CEP164Q9UPV0 1460 aa32.7■■■□□ 2.82
UBC-206ENST00000538617 MRC2Q9UBG0 1479 aa32.64■■■□□ 2.82
UBC-206ENST00000538617 WDR62O43379 1518 aa32.53■■■□□ 2.8
UBC-206ENST00000538617 URB2Q14146 1524 aaKnown RBP32.42■■■□□ 2.78
UBC-206ENST00000538617 TOPBP1Q92547 1522 aa32.21■■■□□ 2.75
UBC-206ENST00000538617 DNMBPQ6XZF7 1577 aa32.19■■■□□ 2.74
UBC-206ENST00000538617 ABCC8Q09428 1581 aa32.11■■■□□ 2.73
UBC-206ENST00000538617 CUX1P39880 1505 aa32■■■□□ 2.71
UBC-206ENST00000538617 IFT140Q96RY7 1462 aa31.97■■■□□ 2.71
UBC-206ENST00000538617 POLA1P09884 1462 aaPredicted RBP31.93■■■□□ 2.7
UBC-206ENST00000538617 ZNF608Q9ULD9 1512 aaPredicted RBP31.89■■■□□ 2.7
UBC-206ENST00000538617 FGD5Q6ZNL6 1462 aa31.88■■■□□ 2.69
UBC-206ENST00000538617 TARBP1Q13395 1621 aaKnown RBP31.87■■■□□ 2.69
UBC-206ENST00000538617 RAD54L2Q9Y4B4 1467 aa31.82■■■□□ 2.69
UBC-206ENST00000538617 EIF4G3O43432 1585 aaKnown RBP31.81■■■□□ 2.68
UBC-206ENST00000538617 SOGA1O94964 1423 aa31.76■■■□□ 2.68
UBC-206ENST00000538617 WRNQ14191 1432 aaPredicted RBP eCLIP31.75■■■□□ 2.679e-6■■■■■ 50.1
UBC-206ENST00000538617 SYNJ1O43426 1573 aa31.75■■■□□ 2.67
UBC-206ENST00000538617 BIVM-ERCC5R4GMW8 1640 aa31.73■■■□□ 2.67
UBC-206ENST00000538617 TOP2BQ02880 1626 aa31.7■■■□□ 2.67
UBC-206ENST00000538617 DNAJC5Q9H3Z4 198 aa31.69■■■□□ 2.66
UBC-206ENST00000538617 AQRO60306 1485 aaKnown RBP eCLIP31.68■■■□□ 2.662e-11■■■■■ 51
UBC-206ENST00000538617 WDR97A6NE52 1622 aa31.67■■■□□ 2.66
UBC-206ENST00000538617 TDRD9Q8NDG6 1382 aaKnown RBP31.61■■■□□ 2.65
UBC-206ENST00000538617 ABCA10Q8WWZ4 1543 aa31.52■■■□□ 2.64
UBC-206ENST00000538617 PBRM1Q86U86 1689 aa31.47■■■□□ 2.63
UBC-206ENST00000538617 ABCA5Q8WWZ7 1642 aa31.46■■■□□ 2.63
UBC-206ENST00000538617 CHD1O14646 1710 aa31.45■■■□□ 2.63
UBC-206ENST00000538617 GAPVD1Q14C86 1478 aa31.42■■■□□ 2.62
UBC-206ENST00000538617 SNAPC4Q5SXM2 1469 aa31.42■■■□□ 2.62
UBC-206ENST00000538617 GRIN2BQ13224 1484 aa31.4■■■□□ 2.62
UBC-206ENST00000538617 OSCARQ8IYS5 282 aa31.35■■■□□ 2.61
UBC-206ENST00000538617 MAGI1Q96QZ7 1491 aaPredicted RBP31.32■■■□□ 2.6
UBC-206ENST00000538617 FBLN2P98095 1184 aa31.31■■■□□ 2.6
UBC-206ENST00000538617 SYNJ2O15056 1496 aa31.2■■■□□ 2.59
UBC-206ENST00000538617 ADAMTS12P58397 1594 aa31.18■■■□□ 2.58
UBC-206ENST00000538617 CHMP7Q8WUX9 453 aaPredicted RBP31.17■■■□□ 2.58
UBC-206ENST00000538617 ERICH3Q5RHP9 1530 aa31.14■■■□□ 2.58
UBC-206ENST00000538617 KIF27Q86VH2 1401 aa31.06■■■□□ 2.56
UBC-206ENST00000538617 FHAD1B1AJZ9 1412 aa31.03■■■□□ 2.56
UBC-206ENST00000538617 GRIN2AQ12879 1464 aa31.03■■■□□ 2.56
UBC-206ENST00000538617 CLASP1Q7Z460 1538 aa31.01■■■□□ 2.56
UBC-206ENST00000538617 RIMBP3CA6NJZ7 1639 aa30.99■■■□□ 2.55
UBC-206ENST00000538617 RIMBP3BA6NNM3 1639 aa30.99■■■□□ 2.55
UBC-206ENST00000538617 RIMBP3Q9UFD9 1639 aa30.99■■■□□ 2.55
UBC-206ENST00000538617 TRIM41Q8WV44 630 aa30.98■■■□□ 2.55
UBC-206ENST00000538617 ARHGEF11O15085 1522 aa30.95■■■□□ 2.55
UBC-206ENST00000538617 CUL7Q14999 1698 aa30.92■■■□□ 2.54
UBC-206ENST00000538617 CEP170Q5SW79 1584 aa30.92■■■□□ 2.54
UBC-206ENST00000538617 IGF1RP08069 1367 aa30.9■■■□□ 2.54
UBC-206ENST00000538617 RUSC2Q8N2Y8 1516 aa30.86■■■□□ 2.53
UBC-206ENST00000538617 NUP160Q12769 1436 aa30.86■■■□□ 2.53
UBC-206ENST00000538617 CARMIL1Q5VZK9 1371 aa30.75■■■□□ 2.51
UBC-206ENST00000538617 ARAP1Q96P48 1450 aa30.71■■■□□ 2.51
UBC-206ENST00000538617 SHROOM2Q13796 1616 aa30.67■■■□□ 2.5
UBC-206ENST00000538617 ERCC6L2Q5T890 1561 aa30.64■■■□□ 2.5
UBC-206ENST00000538617 CYB5RLQ6IPT4 315 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms