RNA–Protein interactions for RNA: ENST00000295926.7

CCNL1-202, Transcript of cyclin L1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNL1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-202ENST00000295926 NISCHQ9Y2I1 1504 aa31.72■■■□□ 2.67
CCNL1-202ENST00000295926 SHROOM4Q9ULL8 1493 aa27.1■■□□□ 1.93
CCNL1-202ENST00000295926 CCDC180Q9P1Z9 1646 aa26.92■■□□□ 1.9
CCNL1-202ENST00000295926 ZCCHC6Q5VYS8 1495 aaKnown RBP26.8■■□□□ 1.88
CCNL1-202ENST00000295926 SUPT5HO00267 1087 aaKnown RBP26.56■■□□□ 1.84
CCNL1-202ENST00000295926 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
CCNL1-202ENST00000295926 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
CCNL1-202ENST00000295926 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
CCNL1-202ENST00000295926 MYO15BQ96JP2 1530 aa25.61■■□□□ 1.69
CCNL1-202ENST00000295926 SCRIBQ14160 1630 aa25.31■■□□□ 1.64
CCNL1-202ENST00000295926 ABCC9O60706 1549 aa25.26■■□□□ 1.63
CCNL1-202ENST00000295926 RSF1Q96T23 1441 aaPredicted RBP25.11■■□□□ 1.61
CCNL1-202ENST00000295926 LOC105371045A0A1W2PR82 267 aa25.04■■□□□ 1.6
CCNL1-202ENST00000295926 NACADO15069 1562 aa24.95■■□□□ 1.58
CCNL1-202ENST00000295926 PCGF6Q9BYE7 350 aa24.93■■□□□ 1.58
CCNL1-202ENST00000295926 HRCP23327 699 aa24.85■■□□□ 1.57
CCNL1-202ENST00000295926 RB1CC1Q8TDY2 1594 aa24.81■■□□□ 1.56
CCNL1-202ENST00000295926 CECR2Q9BXF3 1484 aa24.78■■□□□ 1.56
CCNL1-202ENST00000295926 TRIM41Q8WV44 630 aa24.73■■□□□ 1.55
CCNL1-202ENST00000295926 MROH2BQ7Z745 1585 aa24.68■■□□□ 1.54
CCNL1-202ENST00000295926 FAM9AQ8IZU1 332 aaPredicted RBP24.57■■□□□ 1.52
CCNL1-202ENST00000295926 WIZO95785 1651 aa24.53■■□□□ 1.52
CCNL1-202ENST00000295926 TRIM26Q12899 539 aaPredicted RBP24.44■■□□□ 1.5
CCNL1-202ENST00000295926 PPARGC1BQ86YN6 1023 aaKnown RBP24.39■■□□□ 1.49
CCNL1-202ENST00000295926 EHMT2Q96KQ7 1210 aa24.38■■□□□ 1.49
CCNL1-202ENST00000295926 BAZ1AQ9NRL2 1556 aaPredicted RBP24.35■■□□□ 1.49
CCNL1-202ENST00000295926 UNC13AQ9UPW8 1703 aa24.17■■□□□ 1.46
CCNL1-202ENST00000295926 SMARCA4P51532 1647 aa24.15■■□□□ 1.46
CCNL1-202ENST00000295926 TOP2AP11388 1531 aaKnown RBP24.12■■□□□ 1.45
CCNL1-202ENST00000295926 EIF4G1Q04637 1599 aaKnown RBP24.12■■□□□ 1.45
CCNL1-202ENST00000295926 CCDC88BA6NC98 1476 aa24.06■■□□□ 1.44
CCNL1-202ENST00000295926 PABPN1Q86U42 306 aaKnown RBP eCLIP24.06■■□□□ 1.448e-6■□□□□ 8.9
CCNL1-202ENST00000295926 SMARCA2P51531 1590 aa24■■□□□ 1.43
CCNL1-202ENST00000295926 ABCC8Q09428 1581 aa23.98■■□□□ 1.43
CCNL1-202ENST00000295926 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
CCNL1-202ENST00000295926 ZEB1P37275 1124 aaPredicted RBP23.85■■□□□ 1.41
CCNL1-202ENST00000295926 SOGA1O94964 1423 aa23.77■■□□□ 1.4
CCNL1-202ENST00000295926 PEG3Q9GZU2 1588 aa23.66■■□□□ 1.38
CCNL1-202ENST00000295926 RUSC2Q8N2Y8 1516 aa23.65■■□□□ 1.38
CCNL1-202ENST00000295926 CSRNP3Q8WYN3 585 aa23.65■■□□□ 1.38
CCNL1-202ENST00000295926 CEP162Q5TB80 1403 aa23.61■■□□□ 1.37
CCNL1-202ENST00000295926 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.372e-6■■■■□ 22.3
CCNL1-202ENST00000295926 EEA1Q15075 1411 aa23.58■■□□□ 1.37
CCNL1-202ENST00000295926 UBTFP17480 764 aaKnown RBP23.58■■□□□ 1.37
CCNL1-202ENST00000295926 ATAD2BQ9ULI0 1458 aa23.58■■□□□ 1.37
CCNL1-202ENST00000295926 TNIKQ9UKE5 1360 aa23.58■■□□□ 1.36
CCNL1-202ENST00000295926 TTBK1Q5TCY1 1321 aaPredicted RBP23.57■■□□□ 1.36
CCNL1-202ENST00000295926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.52■■□□□ 1.36
CCNL1-202ENST00000295926 BAZ1BQ9UIG0 1483 aaKnown RBP23.51■■□□□ 1.35
CCNL1-202ENST00000295926 SYNJ1O43426 1573 aa23.45■■□□□ 1.34
CCNL1-202ENST00000295926 GOLGA3Q08378 1498 aa23.44■■□□□ 1.34
CCNL1-202ENST00000295926 CCER1Q8TC90 406 aaPredicted RBP23.44■■□□□ 1.34
CCNL1-202ENST00000295926 CEP164Q9UPV0 1460 aa23.31■■□□□ 1.32
CCNL1-202ENST00000295926 KIF21BO75037 1637 aa23.25■■□□□ 1.31
CCNL1-202ENST00000295926 CLIP1P30622 1438 aa23.2■■□□□ 1.3
CCNL1-202ENST00000295926 RAPGEF2Q9Y4G8 1499 aa23.18■■□□□ 1.3
CCNL1-202ENST00000295926 RANGAP1P46060 587 aaPredicted RBP23.17■■□□□ 1.3
CCNL1-202ENST00000295926 TOP2BQ02880 1626 aa23.15■■□□□ 1.3
CCNL1-202ENST00000295926 NCAPD3P42695 1498 aa23.11■■□□□ 1.29
CCNL1-202ENST00000295926 HMGXB3Q12766 1538 aa23.07■■□□□ 1.28
CCNL1-202ENST00000295926 VPS8Q8N3P4 1428 aa23.07■■□□□ 1.28
CCNL1-202ENST00000295926 BIVM-ERCC5R4GMW8 1640 aa23.04■■□□□ 1.28
CCNL1-202ENST00000295926 APLP2Q06481 763 aa23.03■■□□□ 1.28
CCNL1-202ENST00000295926 HNRNPUL2Q1KMD3 747 aaKnown RBP23.03■■□□□ 1.28
CCNL1-202ENST00000295926 CUX1P39880 1505 aa22.97■■□□□ 1.27
CCNL1-202ENST00000295926 PRXQ9BXM0 1461 aa22.93■■□□□ 1.26
CCNL1-202ENST00000295926 DIEXFQ68CQ4 756 aaKnown RBP22.93■■□□□ 1.26
CCNL1-202ENST00000295926 CFTRP13569 1480 aa22.92■■□□□ 1.26
CCNL1-202ENST00000295926 ERICH3Q5RHP9 1530 aa22.89■■□□□ 1.25
CCNL1-202ENST00000295926 KIF27Q86VH2 1401 aa22.86■■□□□ 1.25
CCNL1-202ENST00000295926 SCAF1Q9H7N4 1312 aaKnown RBP22.85■■□□□ 1.25
CCNL1-202ENST00000295926 ARAP1Q96P48 1450 aa22.8■■□□□ 1.24
CCNL1-202ENST00000295926 ZNF316A6NFI3 1004 aaPredicted RBP22.77■■□□□ 1.24
CCNL1-202ENST00000295926 KANK4Q5T7N3 995 aaPredicted RBP22.75■■□□□ 1.23
CCNL1-202ENST00000295926 CADPSQ9ULU8 1353 aa22.7■■□□□ 1.22
CCNL1-202ENST00000295926 ACIN1Q9UKV3 1341 aaKnown RBP22.67■■□□□ 1.22
CCNL1-202ENST00000295926 CUX2O14529 1486 aa22.67■■□□□ 1.22
CCNL1-202ENST00000295926 NEUROD1Q13562 356 aa22.67■■□□□ 1.22
CCNL1-202ENST00000295926 PRDM2Q13029 1718 aa22.64■■□□□ 1.22
CCNL1-202ENST00000295926 IGF1RP08069 1367 aa22.64■■□□□ 1.21
CCNL1-202ENST00000295926 ARHGAP35Q9NRY4 1499 aa22.63■■□□□ 1.21
CCNL1-202ENST00000295926 FGD5Q6ZNL6 1462 aa22.58■■□□□ 1.21
CCNL1-202ENST00000295926 CC2D2AQ9P2K1 1620 aa22.56■■□□□ 1.2
CCNL1-202ENST00000295926 CENPBP07199 599 aaPredicted RBP22.55■■□□□ 1.2
CCNL1-202ENST00000295926 CARMIL1Q5VZK9 1371 aa22.55■■□□□ 1.2
CCNL1-202ENST00000295926 DHX57Q6P158 1386 aaKnown RBP22.51■■□□□ 1.19
CCNL1-202ENST00000295926 RRBP1Q9P2E9 1410 aaKnown RBP22.51■■□□□ 1.19
CCNL1-202ENST00000295926 FANCD2Q9BXW9 1451 aa22.48■■□□□ 1.19
CCNL1-202ENST00000295926 ITGAEP38570 1179 aa22.46■■□□□ 1.19
CCNL1-202ENST00000295926 MIER1Q8N108 512 aa22.46■■□□□ 1.19
CCNL1-202ENST00000295926 CCNB3Q8WWL7 1395 aa22.46■■□□□ 1.19
CCNL1-202ENST00000295926 CLSPNQ9HAW4 1339 aa22.45■■□□□ 1.18
CCNL1-202ENST00000295926 GTF3C3Q9Y5Q9 886 aa22.43■■□□□ 1.18
CCNL1-202ENST00000295926 YTHDC1Q96MU7 727 aaKnown RBP22.42■■□□□ 1.18
CCNL1-202ENST00000295926 P3H3Q8IVL6 736 aa22.4■■□□□ 1.18
CCNL1-202ENST00000295926 RAD54L2Q9Y4B4 1467 aa22.39■■□□□ 1.17
CCNL1-202ENST00000295926 NESP48681 1621 aa22.36■■□□□ 1.17
CCNL1-202ENST00000295926 TIAM1Q13009 1591 aa22.35■■□□□ 1.17
CCNL1-202ENST00000295926 ATP1B4Q9UN42 357 aaPredicted RBP22.33■■□□□ 1.16
CCNL1-202ENST00000295926 DNMBPQ6XZF7 1577 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms