RNA–Protein interactions for RNA: ENST00000540874.5

PTMS-206, Transcript of parathymosin, humanhuman

TSL 2

Gene PTMS, Length 501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-206ENST00000540874 NISCHQ9Y2I1 1504 aa45.45■■■■■ 4.87
PTMS-206ENST00000540874 CCDC180Q9P1Z9 1646 aa40.57■■■■■ 4.09
PTMS-206ENST00000540874 ABCC9O60706 1549 aa40.02■■■■■ 4
PTMS-206ENST00000540874 RB1CC1Q8TDY2 1594 aa38.4■■■■□ 3.74
PTMS-206ENST00000540874 DCAF8L2P0C7V8 631 aa38.26■■■■□ 3.72
PTMS-206ENST00000540874 NACADO15069 1562 aa38.26■■■■□ 3.72
PTMS-206ENST00000540874 MYO15BQ96JP2 1530 aa37.9■■■■□ 3.66
PTMS-206ENST00000540874 ZCCHC6Q5VYS8 1495 aaKnown RBP37.77■■■■□ 3.64
PTMS-206ENST00000540874 DCAF1Q9Y4B6 1507 aa37.6■■■■□ 3.61
PTMS-206ENST00000540874 UNC13AQ9UPW8 1703 aa37.41■■■■□ 3.58
PTMS-206ENST00000540874 PABPN1Q86U42 306 aaKnown RBP eCLIP37.36■■■■□ 3.57
PTMS-206ENST00000540874 BICRAQ9NZM4 1560 aa37.12■■■■□ 3.53
PTMS-206ENST00000540874 SCRIBQ14160 1630 aa36.98■■■■□ 3.51
PTMS-206ENST00000540874 DNAJC5BQ9UF47 199 aa36.97■■■■□ 3.51
PTMS-206ENST00000540874 SHROOM4Q9ULL8 1493 aa36.82■■■■□ 3.49
PTMS-206ENST00000540874 EIF4G1Q04637 1599 aaKnown RBP36.24■■■■□ 3.39
PTMS-206ENST00000540874 CC2D2AQ9P2K1 1620 aa36.18■■■■□ 3.38
PTMS-206ENST00000540874 CECR2Q9BXF3 1484 aa36.02■■■■□ 3.36
PTMS-206ENST00000540874 SMARCA4P51532 1647 aa35.33■■■■□ 3.25
PTMS-206ENST00000540874 BAZ1AQ9NRL2 1556 aaPredicted RBP35.3■■■■□ 3.24
PTMS-206ENST00000540874 NCAPD3P42695 1498 aa35.29■■■■□ 3.24
PTMS-206ENST00000540874 ATAD2BQ9ULI0 1458 aa35.23■■■■□ 3.23
PTMS-206ENST00000540874 SMARCA2P51531 1590 aa35.22■■■■□ 3.23
PTMS-206ENST00000540874 HMGXB3Q12766 1538 aa35.07■■■■□ 3.21
PTMS-206ENST00000540874 MROH2BQ7Z745 1585 aa34.99■■■■□ 3.19
PTMS-206ENST00000540874 PEG3Q9GZU2 1588 aa34.99■■■■□ 3.19
PTMS-206ENST00000540874 BAZ1BQ9UIG0 1483 aaKnown RBP34.98■■■■□ 3.19
PTMS-206ENST00000540874 WIZO95785 1651 aa34.61■■■■□ 3.13
PTMS-206ENST00000540874 ERCC6Q03468 1493 aa34.6■■■■□ 3.13
PTMS-206ENST00000540874 RSF1Q96T23 1441 aaPredicted RBP34.49■■■■□ 3.11
PTMS-206ENST00000540874 NESP48681 1621 aa34.49■■■■□ 3.11
PTMS-206ENST00000540874 LAMC3Q9Y6N6 1575 aa34.43■■■■□ 3.1
PTMS-206ENST00000540874 CUX2O14529 1486 aa34.32■■■■□ 3.08
PTMS-206ENST00000540874 CADPSQ9ULU8 1353 aa34.26■■■■□ 3.08
PTMS-206ENST00000540874 PDS5BQ9NTI5 1447 aa34.26■■■■□ 3.07
PTMS-206ENST00000540874 TOP2AP11388 1531 aaKnown RBP34.25■■■■□ 3.07
PTMS-206ENST00000540874 KIF21AQ7Z4S6 1674 aa34.09■■■■□ 3.05
PTMS-206ENST00000540874 THOC2Q8NI27 1593 aaKnown RBP34.03■■■■□ 3.04
PTMS-206ENST00000540874 CFTRP13569 1480 aa33.95■■■■□ 3.03
PTMS-206ENST00000540874 MRC2Q9UBG0 1479 aa33.87■■■■□ 3.01
PTMS-206ENST00000540874 CEP164Q9UPV0 1460 aa33.87■■■■□ 3.01
PTMS-206ENST00000540874 FANCD2Q9BXW9 1451 aa33.86■■■■□ 3.01
PTMS-206ENST00000540874 CCDC88BA6NC98 1476 aa33.85■■■■□ 3.01
PTMS-206ENST00000540874 WDR62O43379 1518 aa33.74■■■□□ 2.99
PTMS-206ENST00000540874 PRDM2Q13029 1718 aa33.67■■■□□ 2.98
PTMS-206ENST00000540874 DNAJC5Q9H3Z4 198 aa33.66■■■□□ 2.98
PTMS-206ENST00000540874 URB2Q14146 1524 aaKnown RBP33.48■■■□□ 2.95
PTMS-206ENST00000540874 SUPT5HO00267 1087 aaKnown RBP33.46■■■□□ 2.95
PTMS-206ENST00000540874 ABCC8Q09428 1581 aa33.33■■■□□ 2.93
PTMS-206ENST00000540874 TOPBP1Q92547 1522 aa33.26■■■□□ 2.91
PTMS-206ENST00000540874 DNMBPQ6XZF7 1577 aa33.21■■■□□ 2.91
PTMS-206ENST00000540874 IFT140Q96RY7 1462 aa33.18■■■□□ 2.9
PTMS-206ENST00000540874 ZNF608Q9ULD9 1512 aaPredicted RBP32.98■■■□□ 2.87
PTMS-206ENST00000540874 POLA1P09884 1462 aaPredicted RBP32.94■■■□□ 2.86
PTMS-206ENST00000540874 OSCARQ8IYS5 282 aa32.91■■■□□ 2.86
PTMS-206ENST00000540874 TARBP1Q13395 1621 aaKnown RBP32.88■■■□□ 2.85
PTMS-206ENST00000540874 SOGA1O94964 1423 aa32.86■■■□□ 2.85
PTMS-206ENST00000540874 EIF4G3O43432 1585 aaKnown RBP32.86■■■□□ 2.85
PTMS-206ENST00000540874 CUX1P39880 1505 aa32.85■■■□□ 2.85
PTMS-206ENST00000540874 FGD5Q6ZNL6 1462 aa32.83■■■□□ 2.85
PTMS-206ENST00000540874 AQRO60306 1485 aaKnown RBP eCLIP32.8■■■□□ 2.843e-7■■■■□ 20.5
PTMS-206ENST00000540874 RAD54L2Q9Y4B4 1467 aa32.8■■■□□ 2.84
PTMS-206ENST00000540874 TDRD9Q8NDG6 1382 aaKnown RBP32.7■■■□□ 2.82
PTMS-206ENST00000540874 WDR97A6NE52 1622 aa32.69■■■□□ 2.82
PTMS-206ENST00000540874 WRNQ14191 1432 aaPredicted RBP eCLIP32.59■■■□□ 2.81
PTMS-206ENST00000540874 FBLN2P98095 1184 aa32.58■■■□□ 2.81
PTMS-206ENST00000540874 TOP2BQ02880 1626 aa32.51■■■□□ 2.8
PTMS-206ENST00000540874 GRIN2BQ13224 1484 aa32.51■■■□□ 2.79
PTMS-206ENST00000540874 CHD1O14646 1710 aa32.5■■■□□ 2.79
PTMS-206ENST00000540874 BIVM-ERCC5R4GMW8 1640 aa32.5■■■□□ 2.79
PTMS-206ENST00000540874 ABCA10Q8WWZ4 1543 aa32.5■■■□□ 2.79
PTMS-206ENST00000540874 SNAPC4Q5SXM2 1469 aa32.48■■■□□ 2.79
PTMS-206ENST00000540874 GAPVD1Q14C86 1478 aa32.47■■■□□ 2.79
PTMS-206ENST00000540874 TRIM41Q8WV44 630 aa32.46■■■□□ 2.79
PTMS-206ENST00000540874 MAGI1Q96QZ7 1491 aaPredicted RBP32.46■■■□□ 2.79
PTMS-206ENST00000540874 SYNJ1O43426 1573 aa32.45■■■□□ 2.78
PTMS-206ENST00000540874 CHMP7Q8WUX9 453 aaPredicted RBP32.43■■■□□ 2.78
PTMS-206ENST00000540874 PBRM1Q86U86 1689 aa32.38■■■□□ 2.77
PTMS-206ENST00000540874 ABCA5Q8WWZ7 1642 aa32.37■■■□□ 2.77
PTMS-206ENST00000540874 SYNJ2O15056 1496 aa32.34■■■□□ 2.77
PTMS-206ENST00000540874 RIMBP3CA6NJZ7 1639 aa32.29■■■□□ 2.76
PTMS-206ENST00000540874 RIMBP3BA6NNM3 1639 aa32.29■■■□□ 2.76
PTMS-206ENST00000540874 RIMBP3Q9UFD9 1639 aa32.29■■■□□ 2.76
PTMS-206ENST00000540874 ARHGEF11O15085 1522 aa32.26■■■□□ 2.76
PTMS-206ENST00000540874 ERICH3Q5RHP9 1530 aa32.13■■■□□ 2.73
PTMS-206ENST00000540874 CLASP1Q7Z460 1538 aa32.13■■■□□ 2.73
PTMS-206ENST00000540874 ADAMTS12P58397 1594 aa32.09■■■□□ 2.73
PTMS-206ENST00000540874 FHAD1B1AJZ9 1412 aa32.09■■■□□ 2.73
PTMS-206ENST00000540874 CYB5RLQ6IPT4 315 aa32.07■■■□□ 2.72
PTMS-206ENST00000540874 GRIN2AQ12879 1464 aa32.06■■■□□ 2.72
PTMS-206ENST00000540874 KIF27Q86VH2 1401 aa31.97■■■□□ 2.71
PTMS-206ENST00000540874 ARAP1Q96P48 1450 aa31.96■■■□□ 2.71
PTMS-206ENST00000540874 NUP160Q12769 1436 aa31.92■■■□□ 2.7
PTMS-206ENST00000540874 CEP170Q5SW79 1584 aa31.88■■■□□ 2.69
PTMS-206ENST00000540874 IGF1RP08069 1367 aa31.82■■■□□ 2.69
PTMS-206ENST00000540874 CUL7Q14999 1698 aa31.78■■■□□ 2.68
PTMS-206ENST00000540874 SHROOM2Q13796 1616 aa31.7■■■□□ 2.66
PTMS-206ENST00000540874 JPH4Q96JJ6 628 aa31.67■■■□□ 2.66
PTMS-206ENST00000540874 CARMIL1Q5VZK9 1371 aa31.67■■■□□ 2.66
PTMS-206ENST00000540874 ERCC6L2Q5T890 1561 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms