RNA–Protein interactions for RNA: ENST00000485046.5

PLOD1-208, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, humanhuman

TSL 5

Gene PLOD1, Length 991 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD1-208ENST00000485046 NISCHQ9Y2I1 1504 aa35.32■■■■□ 3.24
PLOD1-208ENST00000485046 CCDC180Q9P1Z9 1646 aa31.34■■■□□ 2.61
PLOD1-208ENST00000485046 ABCC9O60706 1549 aa30.83■■■□□ 2.53
PLOD1-208ENST00000485046 RB1CC1Q8TDY2 1594 aa29.6■■■□□ 2.33
PLOD1-208ENST00000485046 NACADO15069 1562 aa29.58■■■□□ 2.33
PLOD1-208ENST00000485046 DCAF8L2P0C7V8 631 aa29.53■■■□□ 2.32
PLOD1-208ENST00000485046 MYO15BQ96JP2 1530 aa29.44■■■□□ 2.3
PLOD1-208ENST00000485046 ZCCHC6Q5VYS8 1495 aaKnown RBP29.39■■■□□ 2.3
PLOD1-208ENST00000485046 DCAF1Q9Y4B6 1507 aa29.25■■■□□ 2.27
PLOD1-208ENST00000485046 PABPN1Q86U42 306 aaKnown RBP eCLIP28.85■■■□□ 2.21
PLOD1-208ENST00000485046 UNC13AQ9UPW8 1703 aa28.77■■■□□ 2.2
PLOD1-208ENST00000485046 BICRAQ9NZM4 1560 aa28.73■■■□□ 2.19
PLOD1-208ENST00000485046 SCRIBQ14160 1630 aa28.58■■■□□ 2.17
PLOD1-208ENST00000485046 DNAJC5BQ9UF47 199 aa28.51■■■□□ 2.15
PLOD1-208ENST00000485046 SHROOM4Q9ULL8 1493 aa28.47■■■□□ 2.15
PLOD1-208ENST00000485046 EIF4G1Q04637 1599 aaKnown RBP27.97■■■□□ 2.07
PLOD1-208ENST00000485046 CC2D2AQ9P2K1 1620 aa27.85■■■□□ 2.05
PLOD1-208ENST00000485046 CECR2Q9BXF3 1484 aa27.75■■■□□ 2.03
PLOD1-208ENST00000485046 NCAPD3P42695 1498 aa27.37■■□□□ 1.97
PLOD1-208ENST00000485046 SMARCA4P51532 1647 aa27.36■■□□□ 1.97
PLOD1-208ENST00000485046 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
PLOD1-208ENST00000485046 ATAD2BQ9ULI0 1458 aa27.33■■□□□ 1.97
PLOD1-208ENST00000485046 SMARCA2P51531 1590 aa27.25■■□□□ 1.95
PLOD1-208ENST00000485046 MROH2BQ7Z745 1585 aa27.2■■□□□ 1.94
PLOD1-208ENST00000485046 PEG3Q9GZU2 1588 aa27.16■■□□□ 1.94
PLOD1-208ENST00000485046 HMGXB3Q12766 1538 aa27.14■■□□□ 1.94
PLOD1-208ENST00000485046 BAZ1BQ9UIG0 1483 aaKnown RBP27.05■■□□□ 1.92
PLOD1-208ENST00000485046 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
PLOD1-208ENST00000485046 WIZO95785 1651 aa26.82■■□□□ 1.88
PLOD1-208ENST00000485046 NESP48681 1621 aa26.65■■□□□ 1.86
PLOD1-208ENST00000485046 TOP2AP11388 1531 aaKnown RBP26.59■■□□□ 1.85
PLOD1-208ENST00000485046 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
PLOD1-208ENST00000485046 LAMC3Q9Y6N6 1575 aa26.56■■□□□ 1.84
PLOD1-208ENST00000485046 CADPSQ9ULU8 1353 aa26.56■■□□□ 1.84
PLOD1-208ENST00000485046 PDS5BQ9NTI5 1447 aa26.46■■□□□ 1.83
PLOD1-208ENST00000485046 CUX2O14529 1486 aa26.38■■□□□ 1.81
PLOD1-208ENST00000485046 CFTRP13569 1480 aa26.36■■□□□ 1.81
PLOD1-208ENST00000485046 CCDC88BA6NC98 1476 aa26.32■■□□□ 1.8
PLOD1-208ENST00000485046 THOC2Q8NI27 1593 aaKnown RBP26.23■■□□□ 1.79
PLOD1-208ENST00000485046 KIF21AQ7Z4S6 1674 aa26.21■■□□□ 1.79
PLOD1-208ENST00000485046 FANCD2Q9BXW9 1451 aa26.19■■□□□ 1.78
PLOD1-208ENST00000485046 MRC2Q9UBG0 1479 aa26.16■■□□□ 1.78
PLOD1-208ENST00000485046 CEP164Q9UPV0 1460 aa26.15■■□□□ 1.78
PLOD1-208ENST00000485046 SUPT5HO00267 1087 aaKnown RBP26.09■■□□□ 1.77
PLOD1-208ENST00000485046 WDR62O43379 1518 aa26.06■■□□□ 1.76
PLOD1-208ENST00000485046 URB2Q14146 1524 aaKnown RBP25.93■■□□□ 1.74
PLOD1-208ENST00000485046 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
PLOD1-208ENST00000485046 DNAJC5Q9H3Z4 198 aa25.79■■□□□ 1.72
PLOD1-208ENST00000485046 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
PLOD1-208ENST00000485046 TOPBP1Q92547 1522 aa25.76■■□□□ 1.71
PLOD1-208ENST00000485046 DNMBPQ6XZF7 1577 aa25.69■■□□□ 1.7
PLOD1-208ENST00000485046 IFT140Q96RY7 1462 aa25.65■■□□□ 1.7
PLOD1-208ENST00000485046 POLA1P09884 1462 aaPredicted RBP25.53■■□□□ 1.68
PLOD1-208ENST00000485046 CUX1P39880 1505 aa25.52■■□□□ 1.68
PLOD1-208ENST00000485046 ZNF608Q9ULD9 1512 aaPredicted RBP25.52■■□□□ 1.68
PLOD1-208ENST00000485046 SOGA1O94964 1423 aa25.46■■□□□ 1.67
PLOD1-208ENST00000485046 TARBP1Q13395 1621 aaKnown RBP25.45■■□□□ 1.67
PLOD1-208ENST00000485046 FGD5Q6ZNL6 1462 aa25.44■■□□□ 1.66
PLOD1-208ENST00000485046 RAD54L2Q9Y4B4 1467 aa25.42■■□□□ 1.66
PLOD1-208ENST00000485046 AQRO60306 1485 aaKnown RBP eCLIP25.38■■□□□ 1.652e-7■■■■■ 29
PLOD1-208ENST00000485046 WRNQ14191 1432 aaPredicted RBP eCLIP25.34■■□□□ 1.65
PLOD1-208ENST00000485046 TDRD9Q8NDG6 1382 aaKnown RBP25.33■■□□□ 1.65
PLOD1-208ENST00000485046 EIF4G3O43432 1585 aaKnown RBP25.33■■□□□ 1.65
PLOD1-208ENST00000485046 OSCARQ8IYS5 282 aa25.33■■□□□ 1.65
PLOD1-208ENST00000485046 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
PLOD1-208ENST00000485046 TOP2BQ02880 1626 aa25.24■■□□□ 1.63
PLOD1-208ENST00000485046 ABCA10Q8WWZ4 1543 aa25.22■■□□□ 1.63
PLOD1-208ENST00000485046 SYNJ1O43426 1573 aa25.21■■□□□ 1.63
PLOD1-208ENST00000485046 BIVM-ERCC5R4GMW8 1640 aa25.19■■□□□ 1.62
PLOD1-208ENST00000485046 GRIN2BQ13224 1484 aa25.16■■□□□ 1.62
PLOD1-208ENST00000485046 GAPVD1Q14C86 1478 aa25.14■■□□□ 1.61
PLOD1-208ENST00000485046 SNAPC4Q5SXM2 1469 aa25.1■■□□□ 1.61
PLOD1-208ENST00000485046 MAGI1Q96QZ7 1491 aaPredicted RBP25.1■■□□□ 1.61
PLOD1-208ENST00000485046 FBLN2P98095 1184 aa25.07■■□□□ 1.6
PLOD1-208ENST00000485046 ABCA5Q8WWZ7 1642 aa25.06■■□□□ 1.6
PLOD1-208ENST00000485046 CHMP7Q8WUX9 453 aaPredicted RBP25.03■■□□□ 1.6
PLOD1-208ENST00000485046 SYNJ2O15056 1496 aa25.01■■□□□ 1.59
PLOD1-208ENST00000485046 CHD1O14646 1710 aa24.96■■□□□ 1.59
PLOD1-208ENST00000485046 PBRM1Q86U86 1689 aa24.93■■□□□ 1.58
PLOD1-208ENST00000485046 ERICH3Q5RHP9 1530 aa24.9■■□□□ 1.58
PLOD1-208ENST00000485046 FHAD1B1AJZ9 1412 aa24.87■■□□□ 1.57
PLOD1-208ENST00000485046 ARHGEF11O15085 1522 aa24.83■■□□□ 1.57
PLOD1-208ENST00000485046 KIF27Q86VH2 1401 aa24.83■■□□□ 1.57
PLOD1-208ENST00000485046 ADAMTS12P58397 1594 aa24.83■■□□□ 1.57
PLOD1-208ENST00000485046 GRIN2AQ12879 1464 aa24.83■■□□□ 1.56
PLOD1-208ENST00000485046 CLASP1Q7Z460 1538 aa24.82■■□□□ 1.56
PLOD1-208ENST00000485046 IGF1RP08069 1367 aa24.8■■□□□ 1.56
PLOD1-208ENST00000485046 RIMBP3CA6NJZ7 1639 aa24.79■■□□□ 1.56
PLOD1-208ENST00000485046 RIMBP3BA6NNM3 1639 aa24.79■■□□□ 1.56
PLOD1-208ENST00000485046 RIMBP3Q9UFD9 1639 aa24.79■■□□□ 1.56
PLOD1-208ENST00000485046 TRIM41Q8WV44 630 aa24.78■■□□□ 1.56
PLOD1-208ENST00000485046 NUP160Q12769 1436 aa24.76■■□□□ 1.55
PLOD1-208ENST00000485046 CYB5RLQ6IPT4 315 aa24.66■■□□□ 1.54
PLOD1-208ENST00000485046 CEP170Q5SW79 1584 aa24.66■■□□□ 1.54
PLOD1-208ENST00000485046 ARAP1Q96P48 1450 aa24.64■■□□□ 1.54
PLOD1-208ENST00000485046 CARMIL1Q5VZK9 1371 aa24.61■■□□□ 1.53
PLOD1-208ENST00000485046 CUL7Q14999 1698 aa24.58■■□□□ 1.53
PLOD1-208ENST00000485046 RUSC2Q8N2Y8 1516 aa24.54■■□□□ 1.52
PLOD1-208ENST00000485046 JPH4Q96JJ6 628 aa24.53■■□□□ 1.52
PLOD1-208ENST00000485046 SHROOM2Q13796 1616 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms