RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 NISCHQ9Y2I1 1504 aa38.92■■■■□ 3.82
UBC-201ENST00000339647 SHROOM4Q9ULL8 1493 aa34.31■■■■□ 3.08
UBC-201ENST00000339647 SUPT5HO00267 1087 aaKnown RBP34.08■■■■□ 3.05
UBC-201ENST00000339647 HRCP23327 699 aa34.04■■■■□ 3.04
UBC-201ENST00000339647 MYO15BQ96JP2 1530 aa33.62■■■□□ 2.97
UBC-201ENST00000339647 PCGF6Q9BYE7 350 aa33.51■■■□□ 2.96
UBC-201ENST00000339647 CHIC1Q5VXU3 224 aa33.45■■■□□ 2.95
UBC-201ENST00000339647 PPARGC1BQ86YN6 1023 aaKnown RBP33.42■■■□□ 2.94
UBC-201ENST00000339647 ZCCHC6Q5VYS8 1495 aaKnown RBP33.07■■■□□ 2.88
UBC-201ENST00000339647 DCAF1Q9Y4B6 1507 aa32.76■■■□□ 2.84
UBC-201ENST00000339647 CCDC180Q9P1Z9 1646 aa32.76■■■□□ 2.84
UBC-201ENST00000339647 DCAF8L2P0C7V8 631 aa32.73■■■□□ 2.83
UBC-201ENST00000339647 LOC105371045A0A1W2PR82 267 aa32.69■■■□□ 2.82
UBC-201ENST00000339647 TRIM26Q12899 539 aaPredicted RBP32.47■■■□□ 2.79
UBC-201ENST00000339647 PELP1Q8IZL8 1130 aaKnown RBP32.3■■■□□ 2.76
UBC-201ENST00000339647 SCAF1Q9H7N4 1312 aaKnown RBP32.08■■■□□ 2.73
UBC-201ENST00000339647 ZEB1P37275 1124 aaPredicted RBP32.06■■■□□ 2.72
UBC-201ENST00000339647 ABCC9O60706 1549 aa31.54■■■□□ 2.64
UBC-201ENST00000339647 FAM9AQ8IZU1 332 aaPredicted RBP31.53■■■□□ 2.64
UBC-201ENST00000339647 TRIM41Q8WV44 630 aa31.52■■■□□ 2.64
UBC-201ENST00000339647 EHMT2Q96KQ7 1210 aa31.41■■■□□ 2.62
UBC-201ENST00000339647 ACIN1Q9UKV3 1341 aaKnown RBP31.35■■■□□ 2.61
UBC-201ENST00000339647 NEUROD1Q13562 356 aa31.31■■■□□ 2.6
UBC-201ENST00000339647 RSF1Q96T23 1441 aaPredicted RBP31.27■■■□□ 2.6
UBC-201ENST00000339647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.17■■■□□ 2.58
UBC-201ENST00000339647 RB1CC1Q8TDY2 1594 aa31.11■■■□□ 2.57
UBC-201ENST00000339647 GTF3C3Q9Y5Q9 886 aa31.1■■■□□ 2.57
UBC-201ENST00000339647 CCER1Q8TC90 406 aaPredicted RBP31.06■■■□□ 2.56
UBC-201ENST00000339647 SCRIBQ14160 1630 aa31.02■■■□□ 2.56
UBC-201ENST00000339647 DIEXFQ68CQ4 756 aaKnown RBP30.97■■■□□ 2.55
UBC-201ENST00000339647 CENPBP07199 599 aaPredicted RBP30.93■■■□□ 2.54
UBC-201ENST00000339647 MYT1Q01538 1121 aa30.9■■■□□ 2.54
UBC-201ENST00000339647 TTBK1Q5TCY1 1321 aaPredicted RBP30.61■■■□□ 2.49
UBC-201ENST00000339647 NACADO15069 1562 aa30.57■■■□□ 2.48
UBC-201ENST00000339647 CECR2Q9BXF3 1484 aa30.5■■■□□ 2.47
UBC-201ENST00000339647 YTHDC1Q96MU7 727 aaKnown RBP30.46■■■□□ 2.47
UBC-201ENST00000339647 ZNF316A6NFI3 1004 aaPredicted RBP30.44■■■□□ 2.46
UBC-201ENST00000339647 MROH2BQ7Z745 1585 aa30.43■■■□□ 2.46
UBC-201ENST00000339647 WIZO95785 1651 aa30.33■■■□□ 2.45
UBC-201ENST00000339647 WRNQ14191 1432 aaPredicted RBP eCLIP30.32■■■□□ 2.449e-6■■■■■ 50.1
UBC-201ENST00000339647 MIER1Q8N108 512 aa30.24■■■□□ 2.43
UBC-201ENST00000339647 CEP162Q5TB80 1403 aa30.22■■■□□ 2.43
UBC-201ENST00000339647 PABPN1Q86U42 306 aaKnown RBP eCLIP30.2■■■□□ 2.43
UBC-201ENST00000339647 EIF4G1Q04637 1599 aaKnown RBP30.18■■■□□ 2.42
UBC-201ENST00000339647 CCDC88BA6NC98 1476 aa30.1■■■□□ 2.41
UBC-201ENST00000339647 ABCC8Q09428 1581 aa30.07■■■□□ 2.4
UBC-201ENST00000339647 BAZ1AQ9NRL2 1556 aaPredicted RBP30.05■■■□□ 2.4
UBC-201ENST00000339647 TNIKQ9UKE5 1360 aa30.03■■■□□ 2.4
UBC-201ENST00000339647 SOGA1O94964 1423 aa29.99■■■□□ 2.39
UBC-201ENST00000339647 UBTFP17480 764 aaKnown RBP29.94■■■□□ 2.38
UBC-201ENST00000339647 HNRNPUL2Q1KMD3 747 aaKnown RBP29.93■■■□□ 2.38
UBC-201ENST00000339647 UNC13AQ9UPW8 1703 aa29.9■■■□□ 2.38
UBC-201ENST00000339647 CSRNP3Q8WYN3 585 aa29.86■■■□□ 2.37
UBC-201ENST00000339647 RUSC2Q8N2Y8 1516 aa29.84■■■□□ 2.37
UBC-201ENST00000339647 EEA1Q15075 1411 aa29.69■■■□□ 2.34
UBC-201ENST00000339647 TOP2AP11388 1531 aaKnown RBP29.69■■■□□ 2.34
UBC-201ENST00000339647 GOLGA3Q08378 1498 aa29.67■■■□□ 2.34
UBC-201ENST00000339647 SUPT16HQ9Y5B9 1047 aaKnown RBP29.66■■■□□ 2.34
UBC-201ENST00000339647 SMARCA2P51531 1590 aa29.63■■■□□ 2.33
UBC-201ENST00000339647 BICRAQ9NZM4 1560 aa29.61■■■□□ 2.33
UBC-201ENST00000339647 CLSPNQ9HAW4 1339 aa29.5■■■□□ 2.31
UBC-201ENST00000339647 TSHZ2Q9NRE2 1034 aa29.47■■■□□ 2.31
UBC-201ENST00000339647 CLIP1P30622 1438 aa29.45■■■□□ 2.3
UBC-201ENST00000339647 SMARCA4P51532 1647 aa29.44■■■□□ 2.3
UBC-201ENST00000339647 APLP2Q06481 763 aa29.39■■■□□ 2.3
UBC-201ENST00000339647 VPS8Q8N3P4 1428 aa29.39■■■□□ 2.3
UBC-201ENST00000339647 CEP164Q9UPV0 1460 aa29.38■■■□□ 2.29
UBC-201ENST00000339647 ANP32EQ9BTT0 268 aa29.36■■■□□ 2.29
UBC-201ENST00000339647 RANGAP1P46060 587 aaPredicted RBP29.32■■■□□ 2.28
UBC-201ENST00000339647 DHX57Q6P158 1386 aaKnown RBP29.31■■■□□ 2.28
UBC-201ENST00000339647 KIF21BO75037 1637 aa29.28■■■□□ 2.28
UBC-201ENST00000339647 SYNJ1O43426 1573 aa29.17■■■□□ 2.26
UBC-201ENST00000339647 RAPGEF2Q9Y4G8 1499 aa29.17■■■□□ 2.26
UBC-201ENST00000339647 KCNH8Q96L42 1107 aa29.15■■■□□ 2.26
UBC-201ENST00000339647 BAZ1BQ9UIG0 1483 aaKnown RBP29.1■■■□□ 2.25
UBC-201ENST00000339647 BCL11AQ9H165 835 aa29.1■■■□□ 2.25
UBC-201ENST00000339647 BCANQ96GW7 911 aa29.1■■■□□ 2.25
UBC-201ENST00000339647 KANK4Q5T7N3 995 aaPredicted RBP29.01■■■□□ 2.23
UBC-201ENST00000339647 FKBP8Q14318 412 aa28.95■■■□□ 2.23
UBC-201ENST00000339647 ATAD2BQ9ULI0 1458 aa28.93■■■□□ 2.22
UBC-201ENST00000339647 ARAP1Q96P48 1450 aa28.85■■■□□ 2.21
UBC-201ENST00000339647 PEG3Q9GZU2 1588 aa28.84■■■□□ 2.21
UBC-201ENST00000339647 RRBP1Q9P2E9 1410 aaKnown RBP28.82■■■□□ 2.2
UBC-201ENST00000339647 ITGAEP38570 1179 aa28.81■■■□□ 2.2
UBC-201ENST00000339647 RBM19Q9Y4C8 960 aaKnown RBP28.8■■■□□ 2.2
UBC-201ENST00000339647 CUX2O14529 1486 aa28.77■■■□□ 2.2
UBC-201ENST00000339647 DDX10Q13206 875 aaKnown RBP28.76■■■□□ 2.19
UBC-201ENST00000339647 CCNB3Q8WWL7 1395 aa28.72■■■□□ 2.19
UBC-201ENST00000339647 MAPKBP1O60336 1514 aa28.66■■■□□ 2.18
UBC-201ENST00000339647 NEFLP07196 543 aa28.66■■■□□ 2.18
UBC-201ENST00000339647 RAB3GAP2Q9H2M9 1393 aa28.65■■■□□ 2.18
UBC-201ENST00000339647 PRXQ9BXM0 1461 aa28.64■■■□□ 2.18
UBC-201ENST00000339647 ERICH3Q5RHP9 1530 aa28.62■■■□□ 2.17
UBC-201ENST00000339647 TRIM52Q96A61 297 aa28.61■■■□□ 2.17
UBC-201ENST00000339647 TOP2BQ02880 1626 aa28.61■■■□□ 2.17
UBC-201ENST00000339647 WDR97A6NE52 1622 aa28.57■■■□□ 2.16
UBC-201ENST00000339647 PPP1R15AO75807 674 aaPredicted RBP28.57■■■□□ 2.16
UBC-201ENST00000339647 SIN3AQ96ST3 1273 aa28.56■■■□□ 2.16
UBC-201ENST00000339647 MSH5O43196 834 aa28.54■■■□□ 2.16
UBC-201ENST00000339647 HIRIP3Q9BW71 556 aaPredicted RBP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms