RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 MYT1Q01538 1121 aa13.87□□□□□ -0.19
CHD8-201ENST00000399982 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.19
CHD8-201ENST00000399982 DCAF8L2P0C7V8 631 aa13.62□□□□□ -0.23
CHD8-201ENST00000399982 ERICH6Q7L0X2 663 aa13.36□□□□□ -0.27
CHD8-201ENST00000399982 CCER1Q8TC90 406 aaPredicted RBP13.12□□□□□ -0.31
CHD8-201ENST00000399982 CENPBP07199 599 aaPredicted RBP13.07□□□□□ -0.32
CHD8-201ENST00000399982 EHMT2Q96KQ7 1210 aa13.04□□□□□ -0.32
CHD8-201ENST00000399982 ZEB1P37275 1124 aaPredicted RBP13.02□□□□□ -0.32
CHD8-201ENST00000399982 APLP2Q06481 763 aa12.74□□□□□ -0.37
CHD8-201ENST00000399982 YTHDC1Q96MU7 727 aaKnown RBP12.73□□□□□ -0.37
CHD8-201ENST00000399982 TTBK1Q5TCY1 1321 aaPredicted RBP12.71□□□□□ -0.37
CHD8-201ENST00000399982 SUPT5HO00267 1087 aaKnown RBP12.68□□□□□ -0.38
CHD8-201ENST00000399982 FAM9AQ8IZU1 332 aaPredicted RBP12.67□□□□□ -0.38
CHD8-201ENST00000399982 DAXXQ9UER7 740 aaPredicted RBP12.61□□□□□ -0.39
CHD8-201ENST00000399982 NEFLP07196 543 aa12.59□□□□□ -0.39
CHD8-201ENST00000399982 PCGF6Q9BYE7 350 aa12.5□□□□□ -0.41
CHD8-201ENST00000399982 NISCHQ9Y2I1 1504 aa12.47□□□□□ -0.41
CHD8-201ENST00000399982 ATP1B4Q9UN42 357 aaPredicted RBP12.4□□□□□ -0.42
CHD8-201ENST00000399982 RANGAP1P46060 587 aaPredicted RBP12.35□□□□□ -0.43
CHD8-201ENST00000399982 HRCP23327 699 aa12.33□□□□□ -0.44
CHD8-201ENST00000399982 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
CHD8-201ENST00000399982 RTL5Q5HYW3 569 aaPredicted RBP12.2□□□□□ -0.46
CHD8-201ENST00000399982 POLR3GLQ9BT43 218 aa12.19□□□□□ -0.46
CHD8-201ENST00000399982 TRIM26Q12899 539 aaPredicted RBP12.19□□□□□ -0.46
CHD8-201ENST00000399982 SHROOM4Q9ULL8 1493 aa12.17□□□□□ -0.46
CHD8-201ENST00000399982 MYT1LQ9UL68 1186 aa12.15□□□□□ -0.46
CHD8-201ENST00000399982 CLSPNQ9HAW4 1339 aa12.14□□□□□ -0.47
CHD8-201ENST00000399982 SLC4A1APQ9BWU0 796 aaKnown RBP12.13□□□□□ -0.47
CHD8-201ENST00000399982 CNGB1Q14028 1251 aaPredicted RBP12.12□□□□□ -0.47
CHD8-201ENST00000399982 CHIC1Q5VXU3 224 aa12.12□□□□□ -0.47
CHD8-201ENST00000399982 GLIPR1L2Q4G1C9 344 aa11.99□□□□□ -0.49
CHD8-201ENST00000399982 TRIM41Q8WV44 630 aa11.95□□□□□ -0.5
CHD8-201ENST00000399982 BCL11AQ9H165 835 aa11.94□□□□□ -0.5
CHD8-201ENST00000399982 SLC24A1O60721 1099 aa11.9□□□□□ -0.5
CHD8-201ENST00000399982 ZBTB47Q9UFB7 747 aaPredicted RBP11.86□□□□□ -0.51
CHD8-201ENST00000399982 DIEXFQ68CQ4 756 aaKnown RBP11.85□□□□□ -0.51
CHD8-201ENST00000399982 UBTFP17480 764 aaKnown RBP11.8□□□□□ -0.52
CHD8-201ENST00000399982 CDK11AQ9UQ88 783 aaPredicted RBP11.8□□□□□ -0.52
CHD8-201ENST00000399982 EIF5BO60841 1220 aaKnown RBP11.78□□□□□ -0.52
CHD8-201ENST00000399982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.76□□□□□ -0.53
CHD8-201ENST00000399982 HNRNPUL2Q1KMD3 747 aaKnown RBP11.76□□□□□ -0.53
CHD8-201ENST00000399982 GTF3C3Q9Y5Q9 886 aa11.76□□□□□ -0.53
CHD8-201ENST00000399982 ITGAEP38570 1179 aa11.74□□□□□ -0.53
CHD8-201ENST00000399982 ACIN1Q9UKV3 1341 aaKnown RBP11.73□□□□□ -0.53
CHD8-201ENST00000399982 PPARGC1BQ86YN6 1023 aaKnown RBP11.72□□□□□ -0.53
CHD8-201ENST00000399982 ANP32AP39687 249 aaKnown RBP11.67□□□□□ -0.54
CHD8-201ENST00000399982 ANP32BQ92688 251 aaKnown RBP11.64□□□□□ -0.55
CHD8-201ENST00000399982 CDK11BP21127 795 aaKnown RBP11.62□□□□□ -0.55
CHD8-201ENST00000399982 CANXP27824 592 aaKnown RBP11.61□□□□□ -0.55
CHD8-201ENST00000399982 BCANQ96GW7 911 aa11.57□□□□□ -0.56
CHD8-201ENST00000399982 ANP32CO43423 234 aa11.53□□□□□ -0.56
CHD8-201ENST00000399982 HSP90AA1P07900 732 aaKnown RBP11.51□□□□□ -0.57
CHD8-201ENST00000399982 NPM2Q86SE8 214 aaKnown RBP11.49□□□□□ -0.57
CHD8-201ENST00000399982 NEFMP07197 916 aa11.45□□□□□ -0.58
CHD8-201ENST00000399982 ANP32EQ9BTT0 268 aa11.45□□□□□ -0.58
CHD8-201ENST00000399982 TULP1O00294 542 aaPredicted RBP11.45□□□□□ -0.58
CHD8-201ENST00000399982 ARXQ96QS3 562 aa11.45□□□□□ -0.58
CHD8-201ENST00000399982 TNNT2P45379 298 aaPredicted RBP11.42□□□□□ -0.58
CHD8-201ENST00000399982 NCBP3Q53F19 620 aaKnown RBP11.42□□□□□ -0.58
CHD8-201ENST00000399982 DCAF1Q9Y4B6 1507 aa11.36□□□□□ -0.59
CHD8-201ENST00000399982 UPF2Q9HAU5 1272 aaKnown RBP11.35□□□□□ -0.59
CHD8-201ENST00000399982 ZNF326Q5BKZ1 582 aaKnown RBP11.34□□□□□ -0.59
CHD8-201ENST00000399982 NCLP19338 710 aaKnown RBP11.33□□□□□ -0.6
CHD8-201ENST00000399982 ERICH6BQ5W0A0 696 aa11.33□□□□□ -0.6
CHD8-201ENST00000399982 TRIM52Q96A61 297 aa11.32□□□□□ -0.6
CHD8-201ENST00000399982 TRIM44Q96DX7 344 aaPredicted RBP11.32□□□□□ -0.6
CHD8-201ENST00000399982 LOC105371045A0A1W2PR82 267 aa11.28□□□□□ -0.6
CHD8-201ENST00000399982 NEUROD1Q13562 356 aa11.28□□□□□ -0.6
CHD8-201ENST00000399982 DDRGK1Q96HY6 314 aa11.28□□□□□ -0.6
CHD8-201ENST00000399982 AMER1Q5JTC6 1135 aaPredicted RBP11.28□□□□□ -0.6
CHD8-201ENST00000399982 A0A0G2JS52 829 aa11.28□□□□□ -0.6
CHD8-201ENST00000399982 FAM50AQ14320 339 aaKnown RBP11.25□□□□□ -0.61
CHD8-201ENST00000399982 NBR1Q14596 966 aa11.24□□□□□ -0.61
CHD8-201ENST00000399982 FKBP8Q14318 412 aa11.24□□□□□ -0.61
CHD8-201ENST00000399982 PLPPR3Q6T4P5 718 aa11.24□□□□□ -0.61
CHD8-201ENST00000399982 SCAF1Q9H7N4 1312 aaKnown RBP11.23□□□□□ -0.61
CHD8-201ENST00000399982 PPM1GO15355 546 aaPredicted RBP11.22□□□□□ -0.61
CHD8-201ENST00000399982 BECN1Q14457 450 aa11.17□□□□□ -0.62
CHD8-201ENST00000399982 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.17□□□□□ -0.62
CHD8-201ENST00000399982 TPRNQ4KMQ1 711 aa11.16□□□□□ -0.62
CHD8-201ENST00000399982 DNTTIP2Q5QJE6 756 aaKnown RBP11.14□□□□□ -0.63
CHD8-201ENST00000399982 PRM3Q9NNZ6 103 aa11.14□□□□□ -0.63
CHD8-201ENST00000399982 CCDC136Q96JN2 1154 aa11.13□□□□□ -0.63
CHD8-201ENST00000399982 GOLGA6L22H0YM25 854 aa11.11□□□□□ -0.63
CHD8-201ENST00000399982 ZRSR1Q15695 479 aaKnown RBP11.11□□□□□ -0.63
CHD8-201ENST00000399982 CLSTN1O94985 981 aa11.1□□□□□ -0.63
CHD8-201ENST00000399982 TAOK2Q9UL54 1235 aa11.09□□□□□ -0.63
CHD8-201ENST00000399982 PTMAP06454 111 aaKnown RBP11.08□□□□□ -0.64
CHD8-201ENST00000399982 HNRNPUQ00839 825 aaKnown RBP eCLIP11.05□□□□□ -0.64
CHD8-201ENST00000399982 PLEKHG5O94827 1062 aa11.04□□□□□ -0.64
CHD8-201ENST00000399982 CCDC180Q9P1Z9 1646 aa11.04□□□□□ -0.64
CHD8-201ENST00000399982 ESF1Q9H501 851 aaKnown RBP11.04□□□□□ -0.64
CHD8-201ENST00000399982 L1TD1Q5T7N2 865 aaKnown RBP11.03□□□□□ -0.64
CHD8-201ENST00000399982 SALL2Q9Y467 1007 aaPredicted RBP11.03□□□□□ -0.64
CHD8-201ENST00000399982 STAG3Q9UJ98 1225 aa11.03□□□□□ -0.64
CHD8-201ENST00000399982 ZBTB7CA1YPR0 619 aa11.02□□□□□ -0.65
CHD8-201ENST00000399982 ARID4BQ4LE39 1312 aaPredicted RBP11.01□□□□□ -0.65
CHD8-201ENST00000399982 TONSLQ96HA7 1378 aa11□□□□□ -0.65
CHD8-201ENST00000399982 NOP58Q9Y2X3 529 aaKnown RBP11□□□□□ -0.65
CHD8-201ENST00000399982 NAP1L5Q96NT1 182 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms