RNA–Protein interactions for RNA: ENST00000465947.5

CCNL1-207, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-207ENST00000465947 NISCHQ9Y2I1 1504 aa43.39■■■■■ 4.54
CCNL1-207ENST00000465947 CCDC180Q9P1Z9 1646 aa38.39■■■■□ 3.74
CCNL1-207ENST00000465947 ABCC9O60706 1549 aa37.72■■■■□ 3.63
CCNL1-207ENST00000465947 DCAF8L2P0C7V8 631 aa36.34■■■■□ 3.41
CCNL1-207ENST00000465947 RB1CC1Q8TDY2 1594 aa36.19■■■■□ 3.38
CCNL1-207ENST00000465947 NACADO15069 1562 aa36.19■■■■□ 3.38
CCNL1-207ENST00000465947 ZCCHC6Q5VYS8 1495 aaKnown RBP36.13■■■■□ 3.37
CCNL1-207ENST00000465947 MYO15BQ96JP2 1530 aa36.01■■■■□ 3.36
CCNL1-207ENST00000465947 DCAF1Q9Y4B6 1507 aa35.87■■■■□ 3.33
CCNL1-207ENST00000465947 PABPN1Q86U42 306 aaKnown RBP eCLIP35.35■■■■□ 3.25
CCNL1-207ENST00000465947 UNC13AQ9UPW8 1703 aa35.26■■■■□ 3.24
CCNL1-207ENST00000465947 BICRAQ9NZM4 1560 aa35.17■■■■□ 3.22
CCNL1-207ENST00000465947 SCRIBQ14160 1630 aa35.12■■■■□ 3.21
CCNL1-207ENST00000465947 DNAJC5BQ9UF47 199 aa34.76■■■■□ 3.16
CCNL1-207ENST00000465947 SHROOM4Q9ULL8 1493 aa34.73■■■■□ 3.15
CCNL1-207ENST00000465947 EIF4G1Q04637 1599 aaKnown RBP34.21■■■■□ 3.07
CCNL1-207ENST00000465947 CC2D2AQ9P2K1 1620 aa34.05■■■■□ 3.04
CCNL1-207ENST00000465947 CECR2Q9BXF3 1484 aa33.88■■■■□ 3.01
CCNL1-207ENST00000465947 SMARCA4P51532 1647 aa33.59■■■□□ 2.97
CCNL1-207ENST00000465947 BAZ1AQ9NRL2 1556 aaPredicted RBP33.57■■■□□ 2.96
CCNL1-207ENST00000465947 ATAD2BQ9ULI0 1458 aa33.5■■■□□ 2.95
CCNL1-207ENST00000465947 NCAPD3P42695 1498 aa33.49■■■□□ 2.95
CCNL1-207ENST00000465947 MROH2BQ7Z745 1585 aa33.47■■■□□ 2.95
CCNL1-207ENST00000465947 SMARCA2P51531 1590 aa33.37■■■□□ 2.93
CCNL1-207ENST00000465947 PEG3Q9GZU2 1588 aa33.28■■■□□ 2.92
CCNL1-207ENST00000465947 HMGXB3Q12766 1538 aa33.22■■■□□ 2.91
CCNL1-207ENST00000465947 BAZ1BQ9UIG0 1483 aaKnown RBP33.17■■■□□ 2.9
CCNL1-207ENST00000465947 RSF1Q96T23 1441 aaPredicted RBP33.14■■■□□ 2.9
CCNL1-207ENST00000465947 WIZO95785 1651 aa33.03■■■□□ 2.88
CCNL1-207ENST00000465947 TOP2AP11388 1531 aaKnown RBP32.68■■■□□ 2.82
CCNL1-207ENST00000465947 NESP48681 1621 aa32.66■■■□□ 2.82
CCNL1-207ENST00000465947 CADPSQ9ULU8 1353 aa32.53■■■□□ 2.8
CCNL1-207ENST00000465947 LAMC3Q9Y6N6 1575 aa32.49■■■□□ 2.79
CCNL1-207ENST00000465947 ERCC6Q03468 1493 aa32.45■■■□□ 2.79
CCNL1-207ENST00000465947 CCDC88BA6NC98 1476 aa32.39■■■□□ 2.78
CCNL1-207ENST00000465947 PDS5BQ9NTI5 1447 aa32.34■■■□□ 2.77
CCNL1-207ENST00000465947 SUPT5HO00267 1087 aaKnown RBP32.34■■■□□ 2.77
CCNL1-207ENST00000465947 CFTRP13569 1480 aa32.31■■■□□ 2.76
CCNL1-207ENST00000465947 KIF21AQ7Z4S6 1674 aa32.12■■■□□ 2.73
CCNL1-207ENST00000465947 CUX2O14529 1486 aa32.1■■■□□ 2.73
CCNL1-207ENST00000465947 FANCD2Q9BXW9 1451 aa32.1■■■□□ 2.73
CCNL1-207ENST00000465947 THOC2Q8NI27 1593 aaKnown RBP32.06■■■□□ 2.72
CCNL1-207ENST00000465947 CEP164Q9UPV0 1460 aa32.02■■■□□ 2.72
CCNL1-207ENST00000465947 MRC2Q9UBG0 1479 aa31.98■■■□□ 2.71
CCNL1-207ENST00000465947 WDR62O43379 1518 aa31.85■■■□□ 2.69
CCNL1-207ENST00000465947 URB2Q14146 1524 aaKnown RBP31.8■■■□□ 2.68
CCNL1-207ENST00000465947 PRDM2Q13029 1718 aa31.79■■■□□ 2.68
CCNL1-207ENST00000465947 TOPBP1Q92547 1522 aa31.59■■■□□ 2.65
CCNL1-207ENST00000465947 ABCC8Q09428 1581 aa31.55■■■□□ 2.64
CCNL1-207ENST00000465947 DNMBPQ6XZF7 1577 aa31.5■■■□□ 2.63
CCNL1-207ENST00000465947 CUX1P39880 1505 aa31.38■■■□□ 2.61
CCNL1-207ENST00000465947 IFT140Q96RY7 1462 aa31.37■■■□□ 2.61
CCNL1-207ENST00000465947 POLA1P09884 1462 aaPredicted RBP31.33■■■□□ 2.61
CCNL1-207ENST00000465947 ZNF608Q9ULD9 1512 aaPredicted RBP31.28■■■□□ 2.6
CCNL1-207ENST00000465947 FGD5Q6ZNL6 1462 aa31.25■■■□□ 2.59
CCNL1-207ENST00000465947 RAD54L2Q9Y4B4 1467 aa31.24■■■□□ 2.59
CCNL1-207ENST00000465947 SOGA1O94964 1423 aa31.24■■■□□ 2.59
CCNL1-207ENST00000465947 DNAJC5Q9H3Z4 198 aa31.22■■■□□ 2.59
CCNL1-207ENST00000465947 TARBP1Q13395 1621 aaKnown RBP31.2■■■□□ 2.59
CCNL1-207ENST00000465947 WRNQ14191 1432 aaPredicted RBP eCLIP31.19■■■□□ 2.582e-6■■■■□ 22.3
CCNL1-207ENST00000465947 AQRO60306 1485 aaKnown RBP eCLIP31.13■■■□□ 2.578e-9■■■■■ 42.1
CCNL1-207ENST00000465947 TDRD9Q8NDG6 1382 aaKnown RBP31.09■■■□□ 2.57
CCNL1-207ENST00000465947 SYNJ1O43426 1573 aa31.07■■■□□ 2.56
CCNL1-207ENST00000465947 TOP2BQ02880 1626 aa31.05■■■□□ 2.56
CCNL1-207ENST00000465947 EIF4G3O43432 1585 aaKnown RBP31.03■■■□□ 2.56
CCNL1-207ENST00000465947 BIVM-ERCC5R4GMW8 1640 aa31.01■■■□□ 2.55
CCNL1-207ENST00000465947 ABCA10Q8WWZ4 1543 aa30.95■■■□□ 2.55
CCNL1-207ENST00000465947 OSCARQ8IYS5 282 aa30.88■■■□□ 2.53
CCNL1-207ENST00000465947 WDR97A6NE52 1622 aa30.87■■■□□ 2.53
CCNL1-207ENST00000465947 GAPVD1Q14C86 1478 aa30.84■■■□□ 2.53
CCNL1-207ENST00000465947 GRIN2BQ13224 1484 aa30.82■■■□□ 2.53
CCNL1-207ENST00000465947 SNAPC4Q5SXM2 1469 aa30.77■■■□□ 2.52
CCNL1-207ENST00000465947 FBLN2P98095 1184 aa30.75■■■□□ 2.51
CCNL1-207ENST00000465947 ABCA5Q8WWZ7 1642 aa30.75■■■□□ 2.51
CCNL1-207ENST00000465947 MAGI1Q96QZ7 1491 aaPredicted RBP30.7■■■□□ 2.51
CCNL1-207ENST00000465947 CHMP7Q8WUX9 453 aaPredicted RBP30.67■■■□□ 2.5
CCNL1-207ENST00000465947 SYNJ2O15056 1496 aa30.61■■■□□ 2.49
CCNL1-207ENST00000465947 PBRM1Q86U86 1689 aa30.61■■■□□ 2.49
CCNL1-207ENST00000465947 CHD1O14646 1710 aa30.57■■■□□ 2.48
CCNL1-207ENST00000465947 ERICH3Q5RHP9 1530 aa30.54■■■□□ 2.48
CCNL1-207ENST00000465947 TRIM41Q8WV44 630 aa30.54■■■□□ 2.48
CCNL1-207ENST00000465947 KIF27Q86VH2 1401 aa30.53■■■□□ 2.48
CCNL1-207ENST00000465947 IGF1RP08069 1367 aa30.5■■■□□ 2.47
CCNL1-207ENST00000465947 FHAD1B1AJZ9 1412 aa30.49■■■□□ 2.47
CCNL1-207ENST00000465947 ADAMTS12P58397 1594 aa30.46■■■□□ 2.47
CCNL1-207ENST00000465947 GRIN2AQ12879 1464 aa30.42■■■□□ 2.46
CCNL1-207ENST00000465947 CLASP1Q7Z460 1538 aa30.36■■■□□ 2.45
CCNL1-207ENST00000465947 RUSC2Q8N2Y8 1516 aa30.33■■■□□ 2.45
CCNL1-207ENST00000465947 NUP160Q12769 1436 aa30.32■■■□□ 2.44
CCNL1-207ENST00000465947 ARHGEF11O15085 1522 aa30.29■■■□□ 2.44
CCNL1-207ENST00000465947 CARMIL1Q5VZK9 1371 aa30.28■■■□□ 2.44
CCNL1-207ENST00000465947 RIMBP3CA6NJZ7 1639 aa30.25■■■□□ 2.43
CCNL1-207ENST00000465947 RIMBP3BA6NNM3 1639 aa30.25■■■□□ 2.43
CCNL1-207ENST00000465947 RIMBP3Q9UFD9 1639 aa30.25■■■□□ 2.43
CCNL1-207ENST00000465947 CEP170Q5SW79 1584 aa30.24■■■□□ 2.43
CCNL1-207ENST00000465947 CHIC1Q5VXU3 224 aa30.24■■■□□ 2.43
CCNL1-207ENST00000465947 CUL7Q14999 1698 aa30.19■■■□□ 2.42
CCNL1-207ENST00000465947 CYB5RLQ6IPT4 315 aa30.12■■■□□ 2.41
CCNL1-207ENST00000465947 ARAP1Q96P48 1450 aa30.08■■■□□ 2.41
CCNL1-207ENST00000465947 JPH4Q96JJ6 628 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms