RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 NISCHQ9Y2I1 1504 aa34.6■■■■□ 3.13
CCNL1-217ENST00000476367 CCDC180Q9P1Z9 1646 aa30.74■■■□□ 2.51
CCNL1-217ENST00000476367 ABCC9O60706 1549 aa29.89■■■□□ 2.38
CCNL1-217ENST00000476367 ZCCHC6Q5VYS8 1495 aaKnown RBP28.89■■■□□ 2.21
CCNL1-217ENST00000476367 DCAF8L2P0C7V8 631 aa28.84■■■□□ 2.21
CCNL1-217ENST00000476367 RB1CC1Q8TDY2 1594 aa28.82■■■□□ 2.2
CCNL1-217ENST00000476367 NACADO15069 1562 aa28.79■■■□□ 2.2
CCNL1-217ENST00000476367 MYO15BQ96JP2 1530 aa28.63■■■□□ 2.17
CCNL1-217ENST00000476367 DCAF1Q9Y4B6 1507 aa28.59■■■□□ 2.17
CCNL1-217ENST00000476367 UNC13AQ9UPW8 1703 aa28.27■■■□□ 2.12
CCNL1-217ENST00000476367 SCRIBQ14160 1630 aa28.11■■■□□ 2.09
CCNL1-217ENST00000476367 BICRAQ9NZM4 1560 aa27.95■■■□□ 2.06
CCNL1-217ENST00000476367 PABPN1Q86U42 306 aaKnown RBP eCLIP27.92■■■□□ 2.06
CCNL1-217ENST00000476367 SHROOM4Q9ULL8 1493 aa27.6■■■□□ 2.01
CCNL1-217ENST00000476367 EIF4G1Q04637 1599 aaKnown RBP27.2■■□□□ 1.94
CCNL1-217ENST00000476367 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
CCNL1-217ENST00000476367 CC2D2AQ9P2K1 1620 aa27.06■■□□□ 1.92
CCNL1-217ENST00000476367 CECR2Q9BXF3 1484 aa26.95■■□□□ 1.91
CCNL1-217ENST00000476367 SMARCA4P51532 1647 aa26.87■■□□□ 1.89
CCNL1-217ENST00000476367 BAZ1AQ9NRL2 1556 aaPredicted RBP26.82■■□□□ 1.88
CCNL1-217ENST00000476367 MROH2BQ7Z745 1585 aa26.7■■□□□ 1.87
CCNL1-217ENST00000476367 SMARCA2P51531 1590 aa26.61■■□□□ 1.85
CCNL1-217ENST00000476367 ATAD2BQ9ULI0 1458 aa26.61■■□□□ 1.85
CCNL1-217ENST00000476367 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
CCNL1-217ENST00000476367 NCAPD3P42695 1498 aa26.53■■□□□ 1.84
CCNL1-217ENST00000476367 HMGXB3Q12766 1538 aa26.48■■□□□ 1.83
CCNL1-217ENST00000476367 WIZO95785 1651 aa26.47■■□□□ 1.83
CCNL1-217ENST00000476367 BAZ1BQ9UIG0 1483 aaKnown RBP26.44■■□□□ 1.82
CCNL1-217ENST00000476367 RSF1Q96T23 1441 aaPredicted RBP26.42■■□□□ 1.82
CCNL1-217ENST00000476367 TOP2AP11388 1531 aaKnown RBP26.16■■□□□ 1.78
CCNL1-217ENST00000476367 SUPT5HO00267 1087 aaKnown RBP25.95■■□□□ 1.74
CCNL1-217ENST00000476367 NESP48681 1621 aa25.93■■□□□ 1.74
CCNL1-217ENST00000476367 LAMC3Q9Y6N6 1575 aa25.86■■□□□ 1.73
CCNL1-217ENST00000476367 CCDC88BA6NC98 1476 aa25.81■■□□□ 1.72
CCNL1-217ENST00000476367 CADPSQ9ULU8 1353 aa25.77■■□□□ 1.72
CCNL1-217ENST00000476367 ERCC6Q03468 1493 aa25.75■■□□□ 1.71
CCNL1-217ENST00000476367 KIF21AQ7Z4S6 1674 aa25.69■■□□□ 1.7
CCNL1-217ENST00000476367 CFTRP13569 1480 aa25.67■■□□□ 1.7
CCNL1-217ENST00000476367 PRDM2Q13029 1718 aa25.64■■□□□ 1.69
CCNL1-217ENST00000476367 PDS5BQ9NTI5 1447 aa25.64■■□□□ 1.69
CCNL1-217ENST00000476367 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
CCNL1-217ENST00000476367 THOC2Q8NI27 1593 aaKnown RBP25.52■■□□□ 1.68
CCNL1-217ENST00000476367 CEP164Q9UPV0 1460 aa25.5■■□□□ 1.67
CCNL1-217ENST00000476367 MRC2Q9UBG0 1479 aa25.41■■□□□ 1.66
CCNL1-217ENST00000476367 CUX2O14529 1486 aa25.36■■□□□ 1.65
CCNL1-217ENST00000476367 WDR62O43379 1518 aa25.33■■□□□ 1.65
CCNL1-217ENST00000476367 URB2Q14146 1524 aaKnown RBP25.28■■□□□ 1.64
CCNL1-217ENST00000476367 DNMBPQ6XZF7 1577 aa25.15■■□□□ 1.62
CCNL1-217ENST00000476367 TOPBP1Q92547 1522 aa25.15■■□□□ 1.62
CCNL1-217ENST00000476367 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
CCNL1-217ENST00000476367 CUX1P39880 1505 aa25.05■■□□□ 1.6
CCNL1-217ENST00000476367 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.58
CCNL1-217ENST00000476367 FGD5Q6ZNL6 1462 aa24.93■■□□□ 1.58
CCNL1-217ENST00000476367 WRNQ14191 1432 aaPredicted RBP eCLIP24.93■■□□□ 1.582e-6■■■■□ 22.3
CCNL1-217ENST00000476367 IFT140Q96RY7 1462 aa24.91■■□□□ 1.58
CCNL1-217ENST00000476367 SYNJ1O43426 1573 aa24.91■■□□□ 1.58
CCNL1-217ENST00000476367 BIVM-ERCC5R4GMW8 1640 aa24.9■■□□□ 1.58
CCNL1-217ENST00000476367 TOP2BQ02880 1626 aa24.88■■□□□ 1.57
CCNL1-217ENST00000476367 TARBP1Q13395 1621 aaKnown RBP24.88■■□□□ 1.57
CCNL1-217ENST00000476367 RAD54L2Q9Y4B4 1467 aa24.84■■□□□ 1.57
CCNL1-217ENST00000476367 ZNF608Q9ULD9 1512 aaPredicted RBP24.82■■□□□ 1.56
CCNL1-217ENST00000476367 SOGA1O94964 1423 aa24.81■■□□□ 1.56
CCNL1-217ENST00000476367 EIF4G3O43432 1585 aaKnown RBP24.79■■□□□ 1.56
CCNL1-217ENST00000476367 WDR97A6NE52 1622 aa24.77■■□□□ 1.56
CCNL1-217ENST00000476367 AQRO60306 1485 aaKnown RBP eCLIP24.69■■□□□ 1.543e-8■■■■■ 39.2
CCNL1-217ENST00000476367 TDRD9Q8NDG6 1382 aaKnown RBP24.66■■□□□ 1.54
CCNL1-217ENST00000476367 ABCA10Q8WWZ4 1543 aa24.66■■□□□ 1.54
CCNL1-217ENST00000476367 ABCA5Q8WWZ7 1642 aa24.61■■□□□ 1.53
CCNL1-217ENST00000476367 PBRM1Q86U86 1689 aa24.59■■□□□ 1.53
CCNL1-217ENST00000476367 GAPVD1Q14C86 1478 aa24.55■■□□□ 1.52
CCNL1-217ENST00000476367 CHIC1Q5VXU3 224 aa24.53■■□□□ 1.52
CCNL1-217ENST00000476367 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
CCNL1-217ENST00000476367 SNAPC4Q5SXM2 1469 aa24.5■■□□□ 1.51
CCNL1-217ENST00000476367 CHD1O14646 1710 aa24.48■■□□□ 1.51
CCNL1-217ENST00000476367 TRIM41Q8WV44 630 aa24.44■■□□□ 1.5
CCNL1-217ENST00000476367 MAGI1Q96QZ7 1491 aaPredicted RBP24.44■■□□□ 1.5
CCNL1-217ENST00000476367 ERICH3Q5RHP9 1530 aa24.38■■□□□ 1.49
CCNL1-217ENST00000476367 KIF27Q86VH2 1401 aa24.37■■□□□ 1.49
CCNL1-217ENST00000476367 ADAMTS12P58397 1594 aa24.37■■□□□ 1.49
CCNL1-217ENST00000476367 FBLN2P98095 1184 aa24.36■■□□□ 1.49
CCNL1-217ENST00000476367 SYNJ2O15056 1496 aa24.34■■□□□ 1.49
CCNL1-217ENST00000476367 RUSC2Q8N2Y8 1516 aa24.3■■□□□ 1.48
CCNL1-217ENST00000476367 DNAJC5Q9H3Z4 198 aa24.29■■□□□ 1.48
CCNL1-217ENST00000476367 OSCARQ8IYS5 282 aa24.28■■□□□ 1.48
CCNL1-217ENST00000476367 CHMP7Q8WUX9 453 aaPredicted RBP24.28■■□□□ 1.48
CCNL1-217ENST00000476367 FHAD1B1AJZ9 1412 aa24.25■■□□□ 1.47
CCNL1-217ENST00000476367 CUL7Q14999 1698 aa24.24■■□□□ 1.47
CCNL1-217ENST00000476367 GRIN2AQ12879 1464 aa24.23■■□□□ 1.47
CCNL1-217ENST00000476367 IGF1RP08069 1367 aa24.21■■□□□ 1.47
CCNL1-217ENST00000476367 CLASP1Q7Z460 1538 aa24.13■■□□□ 1.45
CCNL1-217ENST00000476367 CEP170Q5SW79 1584 aa24.13■■□□□ 1.45
CCNL1-217ENST00000476367 CARMIL1Q5VZK9 1371 aa24.1■■□□□ 1.45
CCNL1-217ENST00000476367 NUP160Q12769 1436 aa24.08■■□□□ 1.45
CCNL1-217ENST00000476367 EEA1Q15075 1411 aa24.01■■□□□ 1.43
CCNL1-217ENST00000476367 RIMBP3CA6NJZ7 1639 aa24■■□□□ 1.43
CCNL1-217ENST00000476367 RIMBP3BA6NNM3 1639 aa24■■□□□ 1.43
CCNL1-217ENST00000476367 RIMBP3Q9UFD9 1639 aa24■■□□□ 1.43
CCNL1-217ENST00000476367 RAPGEF2Q9Y4G8 1499 aa24■■□□□ 1.43
CCNL1-217ENST00000476367 ARHGEF11O15085 1522 aa23.99■■□□□ 1.43
CCNL1-217ENST00000476367 FAM9AQ8IZU1 332 aaPredicted RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms