RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 AEBP2Q6ZN18 517 aaPredicted RBP21.46■■□□□ 1.03
CCNL1-220ENST00000478454 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
CCNL1-220ENST00000478454 PHF23Q9BUL5 403 aaPredicted RBP18.5■□□□□ 0.55
CCNL1-220ENST00000478454 SENP3Q9H4L4 574 aaPredicted RBP18.05■□□□□ 0.48
CCNL1-220ENST00000478454 PLPPR3Q6T4P5 718 aa16.96■□□□□ 0.31
CCNL1-220ENST00000478454 FOXD1Q16676 465 aa16.84■□□□□ 0.29
CCNL1-220ENST00000478454 PPP6R1Q9UPN7 881 aa16.32■□□□□ 0.2
CCNL1-220ENST00000478454 ADRA2BP18089 450 aa16.27■□□□□ 0.2
CCNL1-220ENST00000478454 PIAS4Q8N2W9 510 aaPredicted RBP15.84■□□□□ 0.13
CCNL1-220ENST00000478454 MSH5O43196 834 aa15.39■□□□□ 0.05
CCNL1-220ENST00000478454 PPP4R3CPQ6ZMV5 832 aa15.01□□□□□ -0.01
CCNL1-220ENST00000478454 KCNA4P22459 653 aa14.78□□□□□ -0.04
CCNL1-220ENST00000478454 MAPK8IP2Q13387 824 aaPredicted RBP14.77□□□□□ -0.05
CCNL1-220ENST00000478454 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
CCNL1-220ENST00000478454 NCBP3Q53F19 620 aaKnown RBP14.53□□□□□ -0.08
CCNL1-220ENST00000478454 CNKSR2Q8WXI2 1034 aa14.53□□□□□ -0.08
CCNL1-220ENST00000478454 DMRT2Q9Y5R5 561 aa14.46□□□□□ -0.09
CCNL1-220ENST00000478454 NPM3O75607 178 aaKnown RBP14.44□□□□□ -0.1
CCNL1-220ENST00000478454 RNF216Q9NWF9 866 aaPredicted RBP14.24□□□□□ -0.13
CCNL1-220ENST00000478454 HOXD11P31277 338 aaPredicted RBP14.2□□□□□ -0.14
CCNL1-220ENST00000478454 SLC4A1APQ9BWU0 796 aaKnown RBP14.01□□□□□ -0.17
CCNL1-220ENST00000478454 POTEDQ86YR6 584 aa14□□□□□ -0.17
CCNL1-220ENST00000478454 DNAJC5BQ9UF47 199 aa13.96□□□□□ -0.17
CCNL1-220ENST00000478454 DCAF8L1A6NGE4 600 aa13.8□□□□□ -0.2
CCNL1-220ENST00000478454 EHMT2Q96KQ7 1210 aa13.73□□□□□ -0.21
CCNL1-220ENST00000478454 ZBTB22O15209 634 aa13.66□□□□□ -0.22
CCNL1-220ENST00000478454 SLC4A2P04920 1241 aa13.66□□□□□ -0.22
CCNL1-220ENST00000478454 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
CCNL1-220ENST00000478454 FOXD4L1Q9NU39 408 aa13.5□□□□□ -0.25
CCNL1-220ENST00000478454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.48□□□□□ -0.252e-9■□□□□ 11.2
CCNL1-220ENST00000478454 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
CCNL1-220ENST00000478454 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.29
CCNL1-220ENST00000478454 RNF39Q9H2S5 420 aa13.27□□□□□ -0.29
CCNL1-220ENST00000478454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.05□□□□□ -0.32
CCNL1-220ENST00000478454 C1QBPQ07021 282 aaKnown RBP13.05□□□□□ -0.32
CCNL1-220ENST00000478454 HNRNPUL2Q1KMD3 747 aaKnown RBP13.05□□□□□ -0.32
CCNL1-220ENST00000478454 ATF5Q9Y2D1 282 aaPredicted RBP13.05□□□□□ -0.32
CCNL1-220ENST00000478454 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
CCNL1-220ENST00000478454 ATXN8OSP0DMR3 200 aa12.99□□□□□ -0.33
CCNL1-220ENST00000478454 SPINK5Q9NQ38 1064 aaPredicted RBP12.98□□□□□ -0.33
CCNL1-220ENST00000478454 APLP2Q06481 763 aa12.85□□□□□ -0.35
CCNL1-220ENST00000478454 CAPN15O75808 1086 aa12.83□□□□□ -0.36
CCNL1-220ENST00000478454 CACNB1Q02641 598 aaPredicted RBP12.83□□□□□ -0.36
CCNL1-220ENST00000478454 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
CCNL1-220ENST00000478454 ZNF219Q9P2Y4 722 aaPredicted RBP12.75□□□□□ -0.37
CCNL1-220ENST00000478454 ABCB7O75027 752 aa12.65□□□□□ -0.38
CCNL1-220ENST00000478454 DSG3P32926 999 aa12.65□□□□□ -0.38
CCNL1-220ENST00000478454 POLA2Q14181 598 aa12.64□□□□□ -0.39
CCNL1-220ENST00000478454 MKRN4PQ13434 485 aaPredicted RBP12.46□□□□□ -0.41
CCNL1-220ENST00000478454 FBLN2P98095 1184 aa12.32□□□□□ -0.44
CCNL1-220ENST00000478454 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
CCNL1-220ENST00000478454 FKBP8Q14318 412 aa12.22□□□□□ -0.45
CCNL1-220ENST00000478454 OSCARQ8IYS5 282 aa12.21□□□□□ -0.45
CCNL1-220ENST00000478454 SPDYE4A6NLX3 237 aa12.13□□□□□ -0.47
CCNL1-220ENST00000478454 SPDYE2BA6NHP3 402 aa12.04□□□□□ -0.48
CCNL1-220ENST00000478454 SPDYE6P0CI01 402 aa12.04□□□□□ -0.48
CCNL1-220ENST00000478454 SPDYE2Q495Y8 402 aa12.04□□□□□ -0.48
CCNL1-220ENST00000478454 ZNF692Q9BU19 519 aaPredicted RBP12.02□□□□□ -0.49
CCNL1-220ENST00000478454 SSUH2Q9Y2M2 353 aa12.01□□□□□ -0.49
CCNL1-220ENST00000478454 PROM2Q8N271 834 aa11.98□□□□□ -0.49
CCNL1-220ENST00000478454 RBM42Q9BTD8 480 aaKnown RBP11.94□□□□□ -0.5
CCNL1-220ENST00000478454 PABPN1Q86U42 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
CCNL1-220ENST00000478454 AKT1S1Q96B36 256 aa11.86□□□□□ -0.51
CCNL1-220ENST00000478454 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
CCNL1-220ENST00000478454 PITPNM1O00562 1244 aa11.67□□□□□ -0.54
CCNL1-220ENST00000478454 FBXO3Q9UK99 471 aa11.67□□□□□ -0.54
CCNL1-220ENST00000478454 SPDYE1Q8NFV5 336 aaPredicted RBP11.66□□□□□ -0.54
CCNL1-220ENST00000478454 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
CCNL1-220ENST00000478454 STAG3Q9UJ98 1225 aa11.62□□□□□ -0.55
CCNL1-220ENST00000478454 VASPP50552 380 aaPredicted RBP11.59□□□□□ -0.55
CCNL1-220ENST00000478454 PRR29P0C7W0 189 aa11.53□□□□□ -0.56
CCNL1-220ENST00000478454 CHRDL2Q6WN34 429 aa11.5□□□□□ -0.57
CCNL1-220ENST00000478454 IFNLR1Q8IU57 520 aaPredicted RBP11.5□□□□□ -0.57
CCNL1-220ENST00000478454 MIER1Q8N108 512 aa11.48□□□□□ -0.57
CCNL1-220ENST00000478454 CREBZFQ9NS37 354 aa11.46□□□□□ -0.57
CCNL1-220ENST00000478454 PLCD3Q8N3E9 789 aa11.44□□□□□ -0.58
CCNL1-220ENST00000478454 FXR2P51116 673 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCNL1-220ENST00000478454 CHADLQ6NUI6 762 aa11.41□□□□□ -0.58
CCNL1-220ENST00000478454 PIP4P2Q8N4L2 257 aa11.4□□□□□ -0.58
CCNL1-220ENST00000478454 MNX1P50219 401 aaPredicted RBP11.39□□□□□ -0.59
CCNL1-220ENST00000478454 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
CCNL1-220ENST00000478454 KLHL34Q8N239 644 aa11.33□□□□□ -0.6
CCNL1-220ENST00000478454 PLEKHG5O94827 1062 aa11.3□□□□□ -0.6
CCNL1-220ENST00000478454 RTN4Q9NQC3 1192 aaKnown RBP11.27□□□□□ -0.61
CCNL1-220ENST00000478454 FARP1Q9Y4F1 1045 aaPredicted RBP11.27□□□□□ -0.61
CCNL1-220ENST00000478454 SPOCK2Q92563 424 aa11.26□□□□□ -0.61
CCNL1-220ENST00000478454 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
CCNL1-220ENST00000478454 NUBP1P53384 320 aa11.24□□□□□ -0.61
CCNL1-220ENST00000478454 AMER1Q5JTC6 1135 aaPredicted RBP11.18□□□□□ -0.62
CCNL1-220ENST00000478454 RASEFQ8IZ41 740 aa11.18□□□□□ -0.62
CCNL1-220ENST00000478454 NPM1P06748 294 aaKnown RBP eCLIP11.16□□□□□ -0.62
CCNL1-220ENST00000478454 PKD2Q13563 968 aa11.14□□□□□ -0.63
CCNL1-220ENST00000478454 CIZ1Q9ULV3 898 aaPredicted RBP11.09□□□□□ -0.63
CCNL1-220ENST00000478454 DCAF8Q5TAQ9 597 aa11.08□□□□□ -0.64
CCNL1-220ENST00000478454 POTEHQ6S545 545 aa11.07□□□□□ -0.64
CCNL1-220ENST00000478454 TSPYL2Q9H2G4 693 aaPredicted RBP11.07□□□□□ -0.64
CCNL1-220ENST00000478454 FAM212AQ96EL1 285 aa11.05□□□□□ -0.64
CCNL1-220ENST00000478454 C19orf67A6NJJ6 358 aa11.03□□□□□ -0.64
CCNL1-220ENST00000478454 GSE1Q14687 1217 aa11.03□□□□□ -0.64
CCNL1-220ENST00000478454 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms