RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-222ENST00000479596 NISCHQ9Y2I1 1504 aa37.36■■■■□ 3.57
CCNL1-222ENST00000479596 CCDC180Q9P1Z9 1646 aa33.35■■■□□ 2.93
CCNL1-222ENST00000479596 ABCC9O60706 1549 aa33■■■□□ 2.87
CCNL1-222ENST00000479596 RB1CC1Q8TDY2 1594 aa31.56■■■□□ 2.64
CCNL1-222ENST00000479596 NACADO15069 1562 aa31.43■■■□□ 2.62
CCNL1-222ENST00000479596 DCAF8L2P0C7V8 631 aa31.25■■■□□ 2.59
CCNL1-222ENST00000479596 MYO15BQ96JP2 1530 aa31.15■■■□□ 2.58
CCNL1-222ENST00000479596 ZCCHC6Q5VYS8 1495 aaKnown RBP31.06■■■□□ 2.56
CCNL1-222ENST00000479596 DCAF1Q9Y4B6 1507 aa30.89■■■□□ 2.54
CCNL1-222ENST00000479596 UNC13AQ9UPW8 1703 aa30.88■■■□□ 2.53
CCNL1-222ENST00000479596 PABPN1Q86U42 306 aaKnown RBP eCLIP30.77■■■□□ 2.52
CCNL1-222ENST00000479596 BICRAQ9NZM4 1560 aa30.7■■■□□ 2.5
CCNL1-222ENST00000479596 DNAJC5BQ9UF47 199 aa30.68■■■□□ 2.5
CCNL1-222ENST00000479596 SCRIBQ14160 1630 aa30.42■■■□□ 2.46
CCNL1-222ENST00000479596 SHROOM4Q9ULL8 1493 aa30.28■■■□□ 2.44
CCNL1-222ENST00000479596 EIF4G1Q04637 1599 aaKnown RBP29.88■■■□□ 2.37
CCNL1-222ENST00000479596 CC2D2AQ9P2K1 1620 aa29.85■■■□□ 2.37
CCNL1-222ENST00000479596 CECR2Q9BXF3 1484 aa29.69■■■□□ 2.34
CCNL1-222ENST00000479596 SMARCA4P51532 1647 aa29.07■■■□□ 2.24
CCNL1-222ENST00000479596 NCAPD3P42695 1498 aa29.04■■■□□ 2.24
CCNL1-222ENST00000479596 ATAD2BQ9ULI0 1458 aa29.01■■■□□ 2.23
CCNL1-222ENST00000479596 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
CCNL1-222ENST00000479596 SMARCA2P51531 1590 aa28.91■■■□□ 2.22
CCNL1-222ENST00000479596 HMGXB3Q12766 1538 aa28.86■■■□□ 2.21
CCNL1-222ENST00000479596 MROH2BQ7Z745 1585 aa28.8■■■□□ 2.2
CCNL1-222ENST00000479596 PEG3Q9GZU2 1588 aa28.8■■■□□ 2.2
CCNL1-222ENST00000479596 BAZ1BQ9UIG0 1483 aaKnown RBP28.72■■■□□ 2.19
CCNL1-222ENST00000479596 NESP48681 1621 aa28.48■■■□□ 2.15
CCNL1-222ENST00000479596 WIZO95785 1651 aa28.46■■■□□ 2.15
CCNL1-222ENST00000479596 ERCC6Q03468 1493 aa28.42■■■□□ 2.14
CCNL1-222ENST00000479596 RSF1Q96T23 1441 aaPredicted RBP28.33■■■□□ 2.13
CCNL1-222ENST00000479596 LAMC3Q9Y6N6 1575 aa28.31■■■□□ 2.12
CCNL1-222ENST00000479596 CUX2O14529 1486 aa28.29■■■□□ 2.12
CCNL1-222ENST00000479596 CADPSQ9ULU8 1353 aa28.15■■■□□ 2.1
CCNL1-222ENST00000479596 THOC2Q8NI27 1593 aaKnown RBP28.14■■■□□ 2.1
CCNL1-222ENST00000479596 TOP2AP11388 1531 aaKnown RBP28.13■■■□□ 2.09
CCNL1-222ENST00000479596 PDS5BQ9NTI5 1447 aa28.1■■■□□ 2.09
CCNL1-222ENST00000479596 KIF21AQ7Z4S6 1674 aa28.1■■■□□ 2.09
CCNL1-222ENST00000479596 CFTRP13569 1480 aa27.93■■■□□ 2.06
CCNL1-222ENST00000479596 MRC2Q9UBG0 1479 aa27.88■■■□□ 2.05
CCNL1-222ENST00000479596 DNAJC5Q9H3Z4 198 aa27.86■■■□□ 2.05
CCNL1-222ENST00000479596 FANCD2Q9BXW9 1451 aa27.83■■■□□ 2.05
CCNL1-222ENST00000479596 WDR62O43379 1518 aa27.82■■■□□ 2.04
CCNL1-222ENST00000479596 CEP164Q9UPV0 1460 aa27.82■■■□□ 2.04
CCNL1-222ENST00000479596 CCDC88BA6NC98 1476 aa27.81■■■□□ 2.04
CCNL1-222ENST00000479596 PRDM2Q13029 1718 aa27.65■■■□□ 2.02
CCNL1-222ENST00000479596 URB2Q14146 1524 aaKnown RBP27.62■■■□□ 2.01
CCNL1-222ENST00000479596 TOPBP1Q92547 1522 aa27.36■■□□□ 1.97
CCNL1-222ENST00000479596 DNMBPQ6XZF7 1577 aa27.29■■□□□ 1.96
CCNL1-222ENST00000479596 ABCC8Q09428 1581 aa27.27■■□□□ 1.96
CCNL1-222ENST00000479596 IFT140Q96RY7 1462 aa27.25■■□□□ 1.95
CCNL1-222ENST00000479596 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
CCNL1-222ENST00000479596 ZNF608Q9ULD9 1512 aaPredicted RBP27.21■■□□□ 1.95
CCNL1-222ENST00000479596 POLA1P09884 1462 aaPredicted RBP27.12■■□□□ 1.93
CCNL1-222ENST00000479596 TARBP1Q13395 1621 aaKnown RBP27.12■■□□□ 1.93
CCNL1-222ENST00000479596 EIF4G3O43432 1585 aaKnown RBP27.08■■□□□ 1.93
CCNL1-222ENST00000479596 CUX1P39880 1505 aa27.04■■□□□ 1.92
CCNL1-222ENST00000479596 RAD54L2Q9Y4B4 1467 aa27■■□□□ 1.91
CCNL1-222ENST00000479596 OSCARQ8IYS5 282 aa27■■□□□ 1.91
CCNL1-222ENST00000479596 AQRO60306 1485 aaKnown RBP eCLIP27■■□□□ 1.918e-9■■■■■ 42.1
CCNL1-222ENST00000479596 FGD5Q6ZNL6 1462 aa26.99■■□□□ 1.91
CCNL1-222ENST00000479596 SOGA1O94964 1423 aa26.96■■□□□ 1.91
CCNL1-222ENST00000479596 TDRD9Q8NDG6 1382 aaKnown RBP26.86■■□□□ 1.89
CCNL1-222ENST00000479596 WDR97A6NE52 1622 aa26.83■■□□□ 1.89
CCNL1-222ENST00000479596 CHD1O14646 1710 aa26.79■■□□□ 1.88
CCNL1-222ENST00000479596 TRIM41Q8WV44 630 aa26.74■■□□□ 1.87
CCNL1-222ENST00000479596 SNAPC4Q5SXM2 1469 aa26.74■■□□□ 1.87
CCNL1-222ENST00000479596 ABCA10Q8WWZ4 1543 aa26.71■■□□□ 1.87
CCNL1-222ENST00000479596 GRIN2BQ13224 1484 aa26.69■■□□□ 1.86
CCNL1-222ENST00000479596 TOP2BQ02880 1626 aa26.69■■□□□ 1.86
CCNL1-222ENST00000479596 BIVM-ERCC5R4GMW8 1640 aa26.69■■□□□ 1.86
CCNL1-222ENST00000479596 SYNJ1O43426 1573 aa26.69■■□□□ 1.86
CCNL1-222ENST00000479596 RIMBP3CA6NJZ7 1639 aa26.68■■□□□ 1.86
CCNL1-222ENST00000479596 RIMBP3BA6NNM3 1639 aa26.68■■□□□ 1.86
CCNL1-222ENST00000479596 RIMBP3Q9UFD9 1639 aa26.68■■□□□ 1.86
CCNL1-222ENST00000479596 WRNQ14191 1432 aaPredicted RBP eCLIP26.68■■□□□ 1.862e-6■■■■□ 22.3
CCNL1-222ENST00000479596 MAGI1Q96QZ7 1491 aaPredicted RBP26.66■■□□□ 1.86
CCNL1-222ENST00000479596 ABCA5Q8WWZ7 1642 aa26.65■■□□□ 1.86
CCNL1-222ENST00000479596 FBLN2P98095 1184 aa26.65■■□□□ 1.86
CCNL1-222ENST00000479596 GAPVD1Q14C86 1478 aa26.64■■□□□ 1.86
CCNL1-222ENST00000479596 ARHGEF11O15085 1522 aa26.64■■□□□ 1.85
CCNL1-222ENST00000479596 PBRM1Q86U86 1689 aa26.62■■□□□ 1.85
CCNL1-222ENST00000479596 SYNJ2O15056 1496 aa26.57■■□□□ 1.84
CCNL1-222ENST00000479596 CLASP1Q7Z460 1538 aa26.54■■□□□ 1.84
CCNL1-222ENST00000479596 CHMP7Q8WUX9 453 aaPredicted RBP26.53■■□□□ 1.84
CCNL1-222ENST00000479596 ARAP1Q96P48 1450 aa26.42■■□□□ 1.82
CCNL1-222ENST00000479596 ADAMTS12P58397 1594 aa26.42■■□□□ 1.82
CCNL1-222ENST00000479596 GRIN2AQ12879 1464 aa26.36■■□□□ 1.81
CCNL1-222ENST00000479596 ERICH3Q5RHP9 1530 aa26.36■■□□□ 1.81
CCNL1-222ENST00000479596 CYB5RLQ6IPT4 315 aa26.35■■□□□ 1.81
CCNL1-222ENST00000479596 FHAD1B1AJZ9 1412 aa26.32■■□□□ 1.8
CCNL1-222ENST00000479596 NUP160Q12769 1436 aa26.29■■□□□ 1.8
CCNL1-222ENST00000479596 CEP170Q5SW79 1584 aa26.29■■□□□ 1.8
CCNL1-222ENST00000479596 ERCC6L2Q5T890 1561 aa26.16■■□□□ 1.78
CCNL1-222ENST00000479596 SHROOM2Q13796 1616 aa26.14■■□□□ 1.77
CCNL1-222ENST00000479596 KIF27Q86VH2 1401 aa26.14■■□□□ 1.77
CCNL1-222ENST00000479596 IGF1RP08069 1367 aa26.11■■□□□ 1.77
CCNL1-222ENST00000479596 RUSC2Q8N2Y8 1516 aa26.04■■□□□ 1.76
CCNL1-222ENST00000479596 CUL7Q14999 1698 aa26.04■■□□□ 1.76
CCNL1-222ENST00000479596 PRG4Q92954 1404 aaPredicted RBP25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms