RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
SCAP-201ENST00000265565 DCAF8L2P0C7V8 631 aa28.43■■■□□ 2.14
SCAP-201ENST00000265565 SUPT5HO00267 1087 aaKnown RBP28.08■■■□□ 2.09
SCAP-201ENST00000265565 SHROOM4Q9ULL8 1493 aa27.75■■■□□ 2.03
SCAP-201ENST00000265565 EHMT2Q96KQ7 1210 aa26.83■■□□□ 1.89
SCAP-201ENST00000265565 PCGF6Q9BYE7 350 aa26.83■■□□□ 1.89
SCAP-201ENST00000265565 FAM9AQ8IZU1 332 aaPredicted RBP26.35■■□□□ 1.81
SCAP-201ENST00000265565 HRCP23327 699 aa26.01■■□□□ 1.75
SCAP-201ENST00000265565 TTBK1Q5TCY1 1321 aaPredicted RBP25.98■■□□□ 1.75
SCAP-201ENST00000265565 TRIM41Q8WV44 630 aa25.84■■□□□ 1.73
SCAP-201ENST00000265565 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
SCAP-201ENST00000265565 ZEB1P37275 1124 aaPredicted RBP25.77■■□□□ 1.72
SCAP-201ENST00000265565 LOC105371045A0A1W2PR82 267 aa25.75■■□□□ 1.71
SCAP-201ENST00000265565 PPARGC1BQ86YN6 1023 aaKnown RBP25.74■■□□□ 1.71
SCAP-201ENST00000265565 CCER1Q8TC90 406 aaPredicted RBP25.65■■□□□ 1.7
SCAP-201ENST00000265565 TRIM26Q12899 539 aaPredicted RBP25.6■■□□□ 1.69
SCAP-201ENST00000265565 APLP2Q06481 763 aa25.52■■□□□ 1.68
SCAP-201ENST00000265565 CENPBP07199 599 aaPredicted RBP25.49■■□□□ 1.67
SCAP-201ENST00000265565 PELP1Q8IZL8 1130 aaKnown RBP25.43■■□□□ 1.66
SCAP-201ENST00000265565 RANGAP1P46060 587 aaPredicted RBP25.33■■□□□ 1.65
SCAP-201ENST00000265565 YTHDC1Q96MU7 727 aaKnown RBP25.24■■□□□ 1.63
SCAP-201ENST00000265565 UBTFP17480 764 aaKnown RBP25.2■■□□□ 1.62
SCAP-201ENST00000265565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.93■■□□□ 1.58
SCAP-201ENST00000265565 HNRNPUL2Q1KMD3 747 aaKnown RBP24.71■■□□□ 1.55
SCAP-201ENST00000265565 DIEXFQ68CQ4 756 aaKnown RBP24.7■■□□□ 1.54
SCAP-201ENST00000265565 ATP1B4Q9UN42 357 aaPredicted RBP24.66■■□□□ 1.54
SCAP-201ENST00000265565 MYT1Q01538 1121 aa24.63■■□□□ 1.53
SCAP-201ENST00000265565 GTF3C3Q9Y5Q9 886 aa24.5■■□□□ 1.51
SCAP-201ENST00000265565 ITGAEP38570 1179 aa24.48■■□□□ 1.51
SCAP-201ENST00000265565 ERICH6Q7L0X2 663 aa24.46■■□□□ 1.51
SCAP-201ENST00000265565 NEFLP07196 543 aa24.44■■□□□ 1.5
SCAP-201ENST00000265565 MYO15BQ96JP2 1530 aa24.38■■□□□ 1.49
SCAP-201ENST00000265565 ACIN1Q9UKV3 1341 aaKnown RBP24.28■■□□□ 1.48
SCAP-201ENST00000265565 DCAF1Q9Y4B6 1507 aa24.26■■□□□ 1.47
SCAP-201ENST00000265565 ZCCHC6Q5VYS8 1495 aaKnown RBP24.19■■□□□ 1.46
SCAP-201ENST00000265565 ZNF316A6NFI3 1004 aaPredicted RBP24.12■■□□□ 1.45
SCAP-201ENST00000265565 SCAF1Q9H7N4 1312 aaKnown RBP24.09■■□□□ 1.45
SCAP-201ENST00000265565 NEUROD1Q13562 356 aa24.02■■□□□ 1.44
SCAP-201ENST00000265565 ABCC9O60706 1549 aa23.95■■□□□ 1.43
SCAP-201ENST00000265565 BCANQ96GW7 911 aa23.93■■□□□ 1.42
SCAP-201ENST00000265565 CNGB1Q14028 1251 aaPredicted RBP23.88■■□□□ 1.41
SCAP-201ENST00000265565 PABPN1Q86U42 306 aaKnown RBP eCLIP23.88■■□□□ 1.41
SCAP-201ENST00000265565 CSRNP3Q8WYN3 585 aa23.88■■□□□ 1.41
SCAP-201ENST00000265565 POLR3GLQ9BT43 218 aa23.8■■□□□ 1.4
SCAP-201ENST00000265565 FAM50AQ14320 339 aaKnown RBP23.77■■□□□ 1.4
SCAP-201ENST00000265565 SCRIBQ14160 1630 aa23.63■■□□□ 1.37
SCAP-201ENST00000265565 MIER1Q8N108 512 aa23.6■■□□□ 1.37
SCAP-201ENST00000265565 ANP32CO43423 234 aa23.5■■□□□ 1.35
SCAP-201ENST00000265565 RSF1Q96T23 1441 aaPredicted RBP23.5■■□□□ 1.35
SCAP-201ENST00000265565 CCDC180Q9P1Z9 1646 aa23.45■■□□□ 1.34
SCAP-201ENST00000265565 TRIM52Q96A61 297 aa23.42■■□□□ 1.34
SCAP-201ENST00000265565 P3H3Q8IVL6 736 aa23.4■■□□□ 1.34
SCAP-201ENST00000265565 FKBP8Q14318 412 aa23.38■■□□□ 1.33
SCAP-201ENST00000265565 DDX10Q13206 875 aaKnown RBP23.34■■□□□ 1.33
SCAP-201ENST00000265565 CDK11AQ9UQ88 783 aaPredicted RBP23.31■■□□□ 1.32
SCAP-201ENST00000265565 DAXXQ9UER7 740 aaPredicted RBP23.29■■□□□ 1.32
SCAP-201ENST00000265565 RTL5Q5HYW3 569 aaPredicted RBP23.23■■□□□ 1.31
SCAP-201ENST00000265565 CEP162Q5TB80 1403 aa23.23■■□□□ 1.31
SCAP-201ENST00000265565 ZNF326Q5BKZ1 582 aaKnown RBP23.19■■□□□ 1.3
SCAP-201ENST00000265565 CLSPNQ9HAW4 1339 aa23.17■■□□□ 1.3
SCAP-201ENST00000265565 HIRIP3Q9BW71 556 aaPredicted RBP23.15■■□□□ 1.3
SCAP-201ENST00000265565 CLIP1P30622 1438 aa23.12■■□□□ 1.29
SCAP-201ENST00000265565 HNRNPUQ00839 825 aaKnown RBP eCLIP23.09■■□□□ 1.29
SCAP-201ENST00000265565 ARID3CA6NKF2 412 aa23.08■■□□□ 1.28
SCAP-201ENST00000265565 TNIKQ9UKE5 1360 aa22.99■■□□□ 1.27
SCAP-201ENST00000265565 TONSLQ96HA7 1378 aa22.99■■□□□ 1.27
SCAP-201ENST00000265565 MYT1LQ9UL68 1186 aa22.99■■□□□ 1.27
SCAP-201ENST00000265565 CECR2Q9BXF3 1484 aa22.98■■□□□ 1.27
SCAP-201ENST00000265565 IRX6P78412 446 aaPredicted RBP22.96■■□□□ 1.27
SCAP-201ENST00000265565 FAM9BQ8IZU0 186 aa22.95■■□□□ 1.26
SCAP-201ENST00000265565 GOLGA3Q08378 1498 aa22.93■■□□□ 1.26
SCAP-201ENST00000265565 RB1CC1Q8TDY2 1594 aa22.92■■□□□ 1.26
SCAP-201ENST00000265565 EEA1Q15075 1411 aa22.88■■□□□ 1.25
SCAP-201ENST00000265565 SOGA1O94964 1423 aa22.87■■□□□ 1.25
SCAP-201ENST00000265565 SUPT16HQ9Y5B9 1047 aaKnown RBP22.85■■□□□ 1.25
SCAP-201ENST00000265565 CHIC2Q9UKJ5 165 aa22.84■■□□□ 1.25
SCAP-201ENST00000265565 SLC4A1APQ9BWU0 796 aaKnown RBP22.83■■□□□ 1.25
SCAP-201ENST00000265565 NPM2Q86SE8 214 aaKnown RBP22.82■■□□□ 1.24
SCAP-201ENST00000265565 WRNQ14191 1432 aaPredicted RBP eCLIP22.82■■□□□ 1.24
SCAP-201ENST00000265565 ANP32AP39687 249 aaKnown RBP22.8■■□□□ 1.24
SCAP-201ENST00000265565 SIN3AQ96ST3 1273 aa22.75■■□□□ 1.23
SCAP-201ENST00000265565 ANP32EQ9BTT0 268 aa22.75■■□□□ 1.23
SCAP-201ENST00000265565 ZNF777Q9ULD5 760 aaPredicted RBP22.73■■□□□ 1.23
SCAP-201ENST00000265565 SALL2Q9Y467 1007 aaPredicted RBP22.73■■□□□ 1.23
SCAP-201ENST00000265565 MRS2Q9HD23 443 aa22.72■■□□□ 1.23
SCAP-201ENST00000265565 NBR1Q14596 966 aa22.71■■□□□ 1.23
SCAP-201ENST00000265565 CEP164Q9UPV0 1460 aa22.68■■□□□ 1.22
SCAP-201ENST00000265565 FBLN2P98095 1184 aa22.68■■□□□ 1.22
SCAP-201ENST00000265565 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
SCAP-201ENST00000265565 CCDC88BA6NC98 1476 aa22.65■■□□□ 1.22
SCAP-201ENST00000265565 CCDC136Q96JN2 1154 aa22.65■■□□□ 1.22
SCAP-201ENST00000265565 SENP3-EIF4A1A0A087X0R7 540 aa22.63■■□□□ 1.21
SCAP-201ENST00000265565 ABCC8Q09428 1581 aa22.62■■□□□ 1.21
SCAP-201ENST00000265565 RRP7BPQ9NSQ0 103 aa22.6■■□□□ 1.21
SCAP-201ENST00000265565 MTUS2Q5JR59 1369 aa22.59■■□□□ 1.21
SCAP-201ENST00000265565 KANK4Q5T7N3 995 aaPredicted RBP22.56■■□□□ 1.2
SCAP-201ENST00000265565 TMC1Q8TDI8 760 aa22.56■■□□□ 1.2
SCAP-201ENST00000265565 EIF4G2P78344 907 aaKnown RBP eCLIP22.56■■□□□ 1.2
SCAP-201ENST00000265565 BAZ1AQ9NRL2 1556 aaPredicted RBP22.52■■□□□ 1.2
SCAP-201ENST00000265565 ZBTB47Q9UFB7 747 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 182.1 ms