RNA–Protein interactions for RNA: ENST00000309083.6

PTMS-201, Transcript of parathymosin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTMS, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-201ENST00000309083 NISCHQ9Y2I1 1504 aa44.78■■■■■ 4.76
PTMS-201ENST00000309083 ABCC9O60706 1549 aa41.21■■■■■ 4.19
PTMS-201ENST00000309083 DNAJC5BQ9UF47 199 aa40.05■■■■■ 4
PTMS-201ENST00000309083 CCDC180Q9P1Z9 1646 aa39.76■■■■□ 3.95
PTMS-201ENST00000309083 RB1CC1Q8TDY2 1594 aa38.48■■■■□ 3.75
PTMS-201ENST00000309083 PABPN1Q86U42 306 aaKnown RBP eCLIP38.11■■■■□ 3.691e-9■□□□□ 8.1
PTMS-201ENST00000309083 NACADO15069 1562 aa37.87■■■■□ 3.65
PTMS-201ENST00000309083 UNC13AQ9UPW8 1703 aa37.86■■■■□ 3.65
PTMS-201ENST00000309083 BICRAQ9NZM4 1560 aa37.63■■■■□ 3.62
PTMS-201ENST00000309083 DNAJC5Q9H3Z4 198 aa37.63■■■■□ 3.61
PTMS-201ENST00000309083 ZCCHC6Q5VYS8 1495 aaKnown RBP37.47■■■■□ 3.59
PTMS-201ENST00000309083 DCAF8L2P0C7V8 631 aa37.28■■■■□ 3.56
PTMS-201ENST00000309083 CECR2Q9BXF3 1484 aa37.22■■■■□ 3.55
PTMS-201ENST00000309083 DCAF1Q9Y4B6 1507 aa37.17■■■■□ 3.54
PTMS-201ENST00000309083 CC2D2AQ9P2K1 1620 aa37.17■■■■□ 3.54
PTMS-201ENST00000309083 MYO15BQ96JP2 1530 aa37.07■■■■□ 3.53
PTMS-201ENST00000309083 EIF4G1Q04637 1599 aaKnown RBP36.72■■■■□ 3.47
PTMS-201ENST00000309083 SHROOM4Q9ULL8 1493 aa36.7■■■■□ 3.47
PTMS-201ENST00000309083 SCRIBQ14160 1630 aa36.21■■■■□ 3.39
PTMS-201ENST00000309083 CUX2O14529 1486 aa35.99■■■■□ 3.35
PTMS-201ENST00000309083 ERCC6Q03468 1493 aa35.54■■■■□ 3.28
PTMS-201ENST00000309083 TRIM41Q8WV44 630 aa35.37■■■■□ 3.25
PTMS-201ENST00000309083 NESP48681 1621 aa35.06■■■■□ 3.2
PTMS-201ENST00000309083 NCAPD3P42695 1498 aa35.01■■■■□ 3.19
PTMS-201ENST00000309083 THOC2Q8NI27 1593 aaKnown RBP35■■■■□ 3.19
PTMS-201ENST00000309083 ATAD2BQ9ULI0 1458 aa34.75■■■■□ 3.15
PTMS-201ENST00000309083 BAZ1AQ9NRL2 1556 aaPredicted RBP34.68■■■■□ 3.14
PTMS-201ENST00000309083 SMARCA2P51531 1590 aa34.63■■■■□ 3.13
PTMS-201ENST00000309083 HMGXB3Q12766 1538 aa34.63■■■■□ 3.13
PTMS-201ENST00000309083 KIF21AQ7Z4S6 1674 aa34.57■■■■□ 3.13
PTMS-201ENST00000309083 SMARCA4P51532 1647 aa34.55■■■■□ 3.12
PTMS-201ENST00000309083 MROH2BQ7Z745 1585 aa34.47■■■■□ 3.11
PTMS-201ENST00000309083 LAMC3Q9Y6N6 1575 aa34.43■■■■□ 3.1
PTMS-201ENST00000309083 RSF1Q96T23 1441 aaPredicted RBP34.4■■■■□ 3.1
PTMS-201ENST00000309083 PEG3Q9GZU2 1588 aa34.27■■■■□ 3.08
PTMS-201ENST00000309083 BAZ1BQ9UIG0 1483 aaKnown RBP34.27■■■■□ 3.08
PTMS-201ENST00000309083 PDS5BQ9NTI5 1447 aa34.19■■■■□ 3.06
PTMS-201ENST00000309083 WDR62O43379 1518 aa34.12■■■■□ 3.05
PTMS-201ENST00000309083 WIZO95785 1651 aa34.09■■■■□ 3.05
PTMS-201ENST00000309083 MRC2Q9UBG0 1479 aa34.09■■■■□ 3.05
PTMS-201ENST00000309083 SUPT5HO00267 1087 aaKnown RBP34.03■■■■□ 3.04
PTMS-201ENST00000309083 OSCARQ8IYS5 282 aa34.02■■■■□ 3.04
PTMS-201ENST00000309083 RIMBP3CA6NJZ7 1639 aa33.97■■■■□ 3.03
PTMS-201ENST00000309083 RIMBP3BA6NNM3 1639 aa33.97■■■■□ 3.03
PTMS-201ENST00000309083 RIMBP3Q9UFD9 1639 aa33.97■■■■□ 3.03
PTMS-201ENST00000309083 TOP2AP11388 1531 aaKnown RBP33.88■■■■□ 3.01
PTMS-201ENST00000309083 CADPSQ9ULU8 1353 aa33.85■■■■□ 3.01
PTMS-201ENST00000309083 ARHGEF11O15085 1522 aa33.67■■■□□ 2.98
PTMS-201ENST00000309083 CEP164Q9UPV0 1460 aa33.63■■■□□ 2.97
PTMS-201ENST00000309083 FANCD2Q9BXW9 1451 aa33.5■■■□□ 2.95
PTMS-201ENST00000309083 CCDC88BA6NC98 1476 aa33.44■■■□□ 2.94
PTMS-201ENST00000309083 URB2Q14146 1524 aaKnown RBP33.42■■■□□ 2.94
PTMS-201ENST00000309083 TRHP20396 242 aaPredicted RBP33.41■■■□□ 2.94
PTMS-201ENST00000309083 AEBP2Q6ZN18 517 aaPredicted RBP33.41■■■□□ 2.94
PTMS-201ENST00000309083 CYB5RLQ6IPT4 315 aa33.4■■■□□ 2.94
PTMS-201ENST00000309083 ARAP1Q96P48 1450 aa33.28■■■□□ 2.92
PTMS-201ENST00000309083 ZNF608Q9ULD9 1512 aaPredicted RBP33.26■■■□□ 2.91
PTMS-201ENST00000309083 CFTRP13569 1480 aa33.21■■■□□ 2.91
PTMS-201ENST00000309083 CHD1O14646 1710 aa33.02■■■□□ 2.88
PTMS-201ENST00000309083 IFT140Q96RY7 1462 aa33■■■□□ 2.87
PTMS-201ENST00000309083 EIF4G3O43432 1585 aaKnown RBP32.97■■■□□ 2.87
PTMS-201ENST00000309083 PRDM2Q13029 1718 aa32.85■■■□□ 2.85
PTMS-201ENST00000309083 TOPBP1Q92547 1522 aa32.75■■■□□ 2.83
PTMS-201ENST00000309083 AQRO60306 1485 aaKnown RBP eCLIP32.71■■■□□ 2.831e-7■■■□□ 18.9
PTMS-201ENST00000309083 TARBP1Q13395 1621 aaKnown RBP32.63■■■□□ 2.81
PTMS-201ENST00000309083 FBLN2P98095 1184 aa32.62■■■□□ 2.81
PTMS-201ENST00000309083 CLASP1Q7Z460 1538 aa32.6■■■□□ 2.81
PTMS-201ENST00000309083 DNMBPQ6XZF7 1577 aa32.48■■■□□ 2.79
PTMS-201ENST00000309083 WRNQ14191 1432 aaPredicted RBP eCLIP32.43■■■□□ 2.787e-8■■■■■ 32.7
PTMS-201ENST00000309083 ABCC8Q09428 1581 aa32.42■■■□□ 2.78
PTMS-201ENST00000309083 ILDR1Q86SU0 546 aaPredicted RBP32.41■■■□□ 2.78
PTMS-201ENST00000309083 POLA1P09884 1462 aaPredicted RBP32.34■■■□□ 2.77
PTMS-201ENST00000309083 SNAPC4Q5SXM2 1469 aa32.32■■■□□ 2.76
PTMS-201ENST00000309083 CUX1P39880 1505 aa32.31■■■□□ 2.76
PTMS-201ENST00000309083 SYNJ1O43426 1573 aa32.3■■■□□ 2.76
PTMS-201ENST00000309083 CHIC1Q5VXU3 224 aa32.28■■■□□ 2.76
PTMS-201ENST00000309083 GAPVD1Q14C86 1478 aa32.28■■■□□ 2.76
PTMS-201ENST00000309083 RAD54L2Q9Y4B4 1467 aa32.28■■■□□ 2.76
PTMS-201ENST00000309083 TOP2BQ02880 1626 aa32.26■■■□□ 2.76
PTMS-201ENST00000309083 TDRD9Q8NDG6 1382 aaKnown RBP32.25■■■□□ 2.75
PTMS-201ENST00000309083 BIVM-ERCC5R4GMW8 1640 aa32.25■■■□□ 2.75
PTMS-201ENST00000309083 CHMP7Q8WUX9 453 aaPredicted RBP32.12■■■□□ 2.73
PTMS-201ENST00000309083 ERCC6L2Q5T890 1561 aa32.09■■■□□ 2.73
PTMS-201ENST00000309083 KIF13AQ9H1H9 1805 aa32.09■■■□□ 2.73
PTMS-201ENST00000309083 MAGI1Q96QZ7 1491 aaPredicted RBP32.09■■■□□ 2.73
PTMS-201ENST00000309083 FGD5Q6ZNL6 1462 aa32.08■■■□□ 2.73
PTMS-201ENST00000309083 SOGA1O94964 1423 aa32.06■■■□□ 2.72
PTMS-201ENST00000309083 SYNJ2O15056 1496 aa32.03■■■□□ 2.72
PTMS-201ENST00000309083 WDR97A6NE52 1622 aa32.02■■■□□ 2.72
PTMS-201ENST00000309083 KDM4FA0A1W2PPD8 638 aa31.95■■■□□ 2.71
PTMS-201ENST00000309083 GRIN2BQ13224 1484 aa31.95■■■□□ 2.7
PTMS-201ENST00000309083 PBRM1Q86U86 1689 aa31.86■■■□□ 2.69
PTMS-201ENST00000309083 ABCA10Q8WWZ4 1543 aa31.85■■■□□ 2.69
PTMS-201ENST00000309083 CEP170Q5SW79 1584 aa31.76■■■□□ 2.67
PTMS-201ENST00000309083 KIF27Q86VH2 1401 aa31.73■■■□□ 2.67
PTMS-201ENST00000309083 EEA1Q15075 1411 aa31.69■■■□□ 2.66
PTMS-201ENST00000309083 SHROOM2Q13796 1616 aa31.64■■■□□ 2.66
PTMS-201ENST00000309083 ABCA5Q8WWZ7 1642 aa31.62■■■□□ 2.65
PTMS-201ENST00000309083 GRIN2AQ12879 1464 aa31.59■■■□□ 2.65
PTMS-201ENST00000309083 ABCC10Q5T3U5 1492 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms