RNA–Protein interactions for RNA: ENST00000479034.5

SRRM1-212, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,671 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-212ENST00000479034 AEBP2Q6ZN18 517 aaPredicted RBP19.83■□□□□ 0.77
SRRM1-212ENST00000479034 CHIC1Q5VXU3 224 aa19.61■□□□□ 0.73
SRRM1-212ENST00000479034 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
SRRM1-212ENST00000479034 NISCHQ9Y2I1 1504 aa16.44■□□□□ 0.22
SRRM1-212ENST00000479034 SENP3Q9H4L4 574 aaPredicted RBP16.33■□□□□ 0.21
SRRM1-212ENST00000479034 PLPPR3Q6T4P5 718 aa16.1■□□□□ 0.17
SRRM1-212ENST00000479034 ADRA2BP18089 450 aa15.54■□□□□ 0.08
SRRM1-212ENST00000479034 PPP6R1Q9UPN7 881 aa15.43■□□□□ 0.06
SRRM1-212ENST00000479034 FOXD1Q16676 465 aa15.37■□□□□ 0.05
SRRM1-212ENST00000479034 KCNA4P22459 653 aa14.93□□□□□ -0.02
SRRM1-212ENST00000479034 EHMT2Q96KQ7 1210 aa14.72□□□□□ -0.05
SRRM1-212ENST00000479034 PIAS4Q8N2W9 510 aaPredicted RBP14.62□□□□□ -0.07
SRRM1-212ENST00000479034 PPP4R3CPQ6ZMV5 832 aa14.38□□□□□ -0.11
SRRM1-212ENST00000479034 DCAF8L2P0C7V8 631 aa14.31□□□□□ -0.12
SRRM1-212ENST00000479034 ABCC9O60706 1549 aa14.19□□□□□ -0.14
SRRM1-212ENST00000479034 CCDC180Q9P1Z9 1646 aa14.14□□□□□ -0.15
SRRM1-212ENST00000479034 SLC4A1APQ9BWU0 796 aaKnown RBP14.12□□□□□ -0.15
SRRM1-212ENST00000479034 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
SRRM1-212ENST00000479034 NPM3O75607 178 aaKnown RBP14.05□□□□□ -0.16
SRRM1-212ENST00000479034 MAPK8IP2Q13387 824 aaPredicted RBP13.89□□□□□ -0.19
SRRM1-212ENST00000479034 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
SRRM1-212ENST00000479034 SHROOM4Q9ULL8 1493 aa13.85□□□□□ -0.19
SRRM1-212ENST00000479034 ZBTB22O15209 634 aa13.85□□□□□ -0.19
SRRM1-212ENST00000479034 ZCCHC6Q5VYS8 1495 aaKnown RBP13.72□□□□□ -0.21
SRRM1-212ENST00000479034 CNKSR2Q8WXI2 1034 aa13.7□□□□□ -0.22
SRRM1-212ENST00000479034 MSH5O43196 834 aa13.59□□□□□ -0.23
SRRM1-212ENST00000479034 SCAF1Q9H7N4 1312 aaKnown RBP13.56□□□□□ -0.24
SRRM1-212ENST00000479034 PABPN1Q86U42 306 aaKnown RBP eCLIP13.52□□□□□ -0.24
SRRM1-212ENST00000479034 SCRIBQ14160 1630 aa13.44□□□□□ -0.26
SRRM1-212ENST00000479034 RB1CC1Q8TDY2 1594 aa13.35□□□□□ -0.27
SRRM1-212ENST00000479034 NACADO15069 1562 aa13.34□□□□□ -0.27
SRRM1-212ENST00000479034 DCAF1Q9Y4B6 1507 aa13.29□□□□□ -0.28
SRRM1-212ENST00000479034 FOXD4L1Q9NU39 408 aa13.29□□□□□ -0.28
SRRM1-212ENST00000479034 RNF216Q9NWF9 866 aaPredicted RBP13.28□□□□□ -0.28
SRRM1-212ENST00000479034 SUPT5HO00267 1087 aaKnown RBP13.19□□□□□ -0.3
SRRM1-212ENST00000479034 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
SRRM1-212ENST00000479034 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
SRRM1-212ENST00000479034 MYO15BQ96JP2 1530 aa13.16□□□□□ -0.3
SRRM1-212ENST00000479034 UNC13AQ9UPW8 1703 aa13.11□□□□□ -0.31
SRRM1-212ENST00000479034 HOXD11P31277 338 aaPredicted RBP13.1□□□□□ -0.31
SRRM1-212ENST00000479034 BICRAQ9NZM4 1560 aa13.05□□□□□ -0.32
SRRM1-212ENST00000479034 DNAJC5BQ9UF47 199 aa13.04□□□□□ -0.32
SRRM1-212ENST00000479034 CECR2Q9BXF3 1484 aa13.04□□□□□ -0.32
SRRM1-212ENST00000479034 DCAF8L1A6NGE4 600 aa12.87□□□□□ -0.35
SRRM1-212ENST00000479034 MROH2BQ7Z745 1585 aa12.84□□□□□ -0.35
SRRM1-212ENST00000479034 ATF5Q9Y2D1 282 aaPredicted RBP12.8□□□□□ -0.36
SRRM1-212ENST00000479034 RSF1Q96T23 1441 aaPredicted RBP12.79□□□□□ -0.36
SRRM1-212ENST00000479034 MYCNP04198 464 aaPredicted RBP12.75□□□□□ -0.37
SRRM1-212ENST00000479034 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
SRRM1-212ENST00000479034 WIZO95785 1651 aa12.71□□□□□ -0.37
SRRM1-212ENST00000479034 FKBP8Q14318 412 aa12.71□□□□□ -0.38
SRRM1-212ENST00000479034 EIF4G1Q04637 1599 aaKnown RBP12.71□□□□□ -0.38
SRRM1-212ENST00000479034 SMARCA4P51532 1647 aa12.66□□□□□ -0.38
SRRM1-212ENST00000479034 POTEDQ86YR6 584 aa12.65□□□□□ -0.38
SRRM1-212ENST00000479034 BAZ1AQ9NRL2 1556 aaPredicted RBP12.65□□□□□ -0.38
SRRM1-212ENST00000479034 CC2D2AQ9P2K1 1620 aa12.62□□□□□ -0.39
SRRM1-212ENST00000479034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.6□□□□□ -0.397e-7■■■□□ 15.3
SRRM1-212ENST00000479034 ATAD2BQ9ULI0 1458 aa12.59□□□□□ -0.39
SRRM1-212ENST00000479034 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
SRRM1-212ENST00000479034 BAZ1BQ9UIG0 1483 aaKnown RBP12.53□□□□□ -0.4
SRRM1-212ENST00000479034 ATXN8OSP0DMR3 200 aa12.52□□□□□ -0.41
SRRM1-212ENST00000479034 CCDC88BA6NC98 1476 aa12.43□□□□□ -0.42
SRRM1-212ENST00000479034 SMARCA2P51531 1590 aa12.42□□□□□ -0.42
SRRM1-212ENST00000479034 NCAPD3P42695 1498 aa12.41□□□□□ -0.42
SRRM1-212ENST00000479034 TOP2AP11388 1531 aaKnown RBP12.39□□□□□ -0.43
SRRM1-212ENST00000479034 NESP48681 1621 aa12.39□□□□□ -0.43
SRRM1-212ENST00000479034 PEG3Q9GZU2 1588 aa12.34□□□□□ -0.43
SRRM1-212ENST00000479034 AMER1Q5JTC6 1135 aaPredicted RBP12.3□□□□□ -0.44
SRRM1-212ENST00000479034 FAM9AQ8IZU1 332 aaPredicted RBP12.29□□□□□ -0.44
SRRM1-212ENST00000479034 HMGXB3Q12766 1538 aa12.28□□□□□ -0.44
SRRM1-212ENST00000479034 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
SRRM1-212ENST00000479034 ABCC8Q09428 1581 aa12.24□□□□□ -0.45
SRRM1-212ENST00000479034 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
SRRM1-212ENST00000479034 ZNF219Q9P2Y4 722 aaPredicted RBP12.22□□□□□ -0.45
SRRM1-212ENST00000479034 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
SRRM1-212ENST00000479034 CADPSQ9ULU8 1353 aa12.2□□□□□ -0.46
SRRM1-212ENST00000479034 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
SRRM1-212ENST00000479034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.17□□□□□ -0.46
SRRM1-212ENST00000479034 HNRNPUL2Q1KMD3 747 aaKnown RBP12.17□□□□□ -0.46
SRRM1-212ENST00000479034 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.46
SRRM1-212ENST00000479034 CFTRP13569 1480 aa12.13□□□□□ -0.47
SRRM1-212ENST00000479034 TRHP20396 242 aaPredicted RBP12.12□□□□□ -0.47
SRRM1-212ENST00000479034 ERCC6Q03468 1493 aa12.1□□□□□ -0.47
SRRM1-212ENST00000479034 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
SRRM1-212ENST00000479034 LOC105371045A0A1W2PR82 267 aa12.04□□□□□ -0.48
SRRM1-212ENST00000479034 WRNQ14191 1432 aaPredicted RBP eCLIP12.04□□□□□ -0.48
SRRM1-212ENST00000479034 RANGAP1P46060 587 aaPredicted RBP12.02□□□□□ -0.49
SRRM1-212ENST00000479034 POLA2Q14181 598 aa12.01□□□□□ -0.49
SRRM1-212ENST00000479034 SPDYE4A6NLX3 237 aa12.01□□□□□ -0.49
SRRM1-212ENST00000479034 PDS5BQ9NTI5 1447 aa12□□□□□ -0.49
SRRM1-212ENST00000479034 KIF21AQ7Z4S6 1674 aa12□□□□□ -0.49
SRRM1-212ENST00000479034 SYNJ1O43426 1573 aa12□□□□□ -0.49
SRRM1-212ENST00000479034 CEP164Q9UPV0 1460 aa12□□□□□ -0.49
SRRM1-212ENST00000479034 RUSC2Q8N2Y8 1516 aa11.99□□□□□ -0.49
SRRM1-212ENST00000479034 SOGA1O94964 1423 aa11.98□□□□□ -0.49
SRRM1-212ENST00000479034 RAD54L2Q9Y4B4 1467 aa11.98□□□□□ -0.49
SRRM1-212ENST00000479034 CUX1P39880 1505 aa11.97□□□□□ -0.49
SRRM1-212ENST00000479034 URB2Q14146 1524 aaKnown RBP11.97□□□□□ -0.49
SRRM1-212ENST00000479034 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.49
SRRM1-212ENST00000479034 ABCB7O75027 752 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms