RNA–Protein interactions for RNA: ENST00000464575.1

CCNL1-205, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 505 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-205ENST00000464575 AEBP2Q6ZN18 517 aaPredicted RBP23.28■■□□□ 1.32
CCNL1-205ENST00000464575 CHIC1Q5VXU3 224 aa21.73■■□□□ 1.07
CCNL1-205ENST00000464575 SENP3Q9H4L4 574 aaPredicted RBP19.94■□□□□ 0.78
CCNL1-205ENST00000464575 PHF23Q9BUL5 403 aaPredicted RBP19.62■□□□□ 0.73
CCNL1-205ENST00000464575 FOXD1Q16676 465 aa18.68■□□□□ 0.58
CCNL1-205ENST00000464575 POTEDQ86YR6 584 aa18.39■□□□□ 0.53
CCNL1-205ENST00000464575 MSH5O43196 834 aa17.71■□□□□ 0.43
CCNL1-205ENST00000464575 PIAS4Q8N2W9 510 aaPredicted RBP17.27■□□□□ 0.36
CCNL1-205ENST00000464575 PPP6R1Q9UPN7 881 aa17■□□□□ 0.31
CCNL1-205ENST00000464575 ADRA2BP18089 450 aa16.9■□□□□ 0.3
CCNL1-205ENST00000464575 PLPPR3Q6T4P5 718 aa16.87■□□□□ 0.29
CCNL1-205ENST00000464575 MAPK8IP2Q13387 824 aaPredicted RBP15.72■□□□□ 0.11
CCNL1-205ENST00000464575 DMRT2Q9Y5R5 561 aa15.72■□□□□ 0.11
CCNL1-205ENST00000464575 CACNB1Q02641 598 aaPredicted RBP15.6■□□□□ 0.09
CCNL1-205ENST00000464575 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.07
CCNL1-205ENST00000464575 DCAF8L1A6NGE4 600 aa15.09■□□□□ 0.01
CCNL1-205ENST00000464575 RNF39Q9H2S5 420 aa15.07■□□□□ 0
CCNL1-205ENST00000464575 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
CCNL1-205ENST00000464575 C1QBPQ07021 282 aaKnown RBP14.81□□□□□ -0.04
CCNL1-205ENST00000464575 PPP4R3CPQ6ZMV5 832 aa14.72□□□□□ -0.05
CCNL1-205ENST00000464575 RNF216Q9NWF9 866 aaPredicted RBP14.61□□□□□ -0.07
CCNL1-205ENST00000464575 CNKSR2Q8WXI2 1034 aa14.59□□□□□ -0.07
CCNL1-205ENST00000464575 DNAJC5BQ9UF47 199 aa14.52□□□□□ -0.09
CCNL1-205ENST00000464575 POTEHQ6S545 545 aa14.28□□□□□ -0.12
CCNL1-205ENST00000464575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.19□□□□□ -0.142e-9■□□□□ 11.2
CCNL1-205ENST00000464575 NCBP3Q53F19 620 aaKnown RBP13.95□□□□□ -0.18
CCNL1-205ENST00000464575 DSG3P32926 999 aa13.9□□□□□ -0.18
CCNL1-205ENST00000464575 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
CCNL1-205ENST00000464575 CAPN15O75808 1086 aa13.81□□□□□ -0.2
CCNL1-205ENST00000464575 U3KPZ7 1027 aaPredicted RBP13.81□□□□□ -0.2
CCNL1-205ENST00000464575 NPM3O75607 178 aaKnown RBP13.75□□□□□ -0.21
CCNL1-205ENST00000464575 ABCB7O75027 752 aa13.44□□□□□ -0.26
CCNL1-205ENST00000464575 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
CCNL1-205ENST00000464575 ZNF219Q9P2Y4 722 aaPredicted RBP13.38□□□□□ -0.27
CCNL1-205ENST00000464575 APLP2Q06481 763 aa13.36□□□□□ -0.27
CCNL1-205ENST00000464575 SLC4A2P04920 1241 aa13.31□□□□□ -0.28
CCNL1-205ENST00000464575 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
CCNL1-205ENST00000464575 CHRDL2Q6WN34 429 aa13.23□□□□□ -0.29
CCNL1-205ENST00000464575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.19□□□□□ -0.3
CCNL1-205ENST00000464575 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
CCNL1-205ENST00000464575 SAMD1Q6SPF0 538 aaPredicted RBP13.09□□□□□ -0.31
CCNL1-205ENST00000464575 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
CCNL1-205ENST00000464575 POLA2Q14181 598 aa12.95□□□□□ -0.34
CCNL1-205ENST00000464575 KCNA4P22459 653 aa12.91□□□□□ -0.34
CCNL1-205ENST00000464575 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
CCNL1-205ENST00000464575 PIP4P2Q8N4L2 257 aa12.79□□□□□ -0.36
CCNL1-205ENST00000464575 HAX1O00165 279 aa12.73□□□□□ -0.37
CCNL1-205ENST00000464575 MYCNP04198 464 aaPredicted RBP12.72□□□□□ -0.37
CCNL1-205ENST00000464575 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
CCNL1-205ENST00000464575 FXR2P51116 673 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCNL1-205ENST00000464575 ZBTB12Q9Y330 459 aaPredicted RBP12.61□□□□□ -0.39
CCNL1-205ENST00000464575 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
CCNL1-205ENST00000464575 EVX2Q03828 476 aa12.54□□□□□ -0.4
CCNL1-205ENST00000464575 OSCARQ8IYS5 282 aa12.53□□□□□ -0.4
CCNL1-205ENST00000464575 ATF5Q9Y2D1 282 aaPredicted RBP12.5□□□□□ -0.41
CCNL1-205ENST00000464575 LHX8Q68G74 356 aa12.28□□□□□ -0.44
CCNL1-205ENST00000464575 PRKAR2AP13861 404 aaKnown RBP12.25□□□□□ -0.45
CCNL1-205ENST00000464575 FOXD4L1Q9NU39 408 aa12.24□□□□□ -0.45
CCNL1-205ENST00000464575 C19orf67A6NJJ6 358 aa12.23□□□□□ -0.45
CCNL1-205ENST00000464575 GABBR2O75899 941 aa12.22□□□□□ -0.45
CCNL1-205ENST00000464575 SPDYE2BA6NHP3 402 aa12.18□□□□□ -0.46
CCNL1-205ENST00000464575 SPDYE6P0CI01 402 aa12.18□□□□□ -0.46
CCNL1-205ENST00000464575 SPDYE2Q495Y8 402 aa12.18□□□□□ -0.46
CCNL1-205ENST00000464575 CLEC11AQ9Y240 323 aa12.14□□□□□ -0.47
CCNL1-205ENST00000464575 SPDYE1Q8NFV5 336 aaPredicted RBP12.12□□□□□ -0.47
CCNL1-205ENST00000464575 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
CCNL1-205ENST00000464575 FBLN2P98095 1184 aa12.03□□□□□ -0.48
CCNL1-205ENST00000464575 PLSCR2Q9NRY7 297 aa12.01□□□□□ -0.49
CCNL1-205ENST00000464575 CHADLQ6NUI6 762 aa11.98□□□□□ -0.49
CCNL1-205ENST00000464575 POTEIP0CG38 1075 aa11.96□□□□□ -0.49
CCNL1-205ENST00000464575 ATXN8OSP0DMR3 200 aa11.95□□□□□ -0.5
CCNL1-205ENST00000464575 ZNF692Q9BU19 519 aaPredicted RBP11.95□□□□□ -0.5
CCNL1-205ENST00000464575 SSUH2Q9Y2M2 353 aa11.95□□□□□ -0.5
CCNL1-205ENST00000464575 MKRN4PQ13434 485 aaPredicted RBP11.89□□□□□ -0.51
CCNL1-205ENST00000464575 ZBTB22O15209 634 aa11.86□□□□□ -0.51
CCNL1-205ENST00000464575 PRR29P0C7W0 189 aa11.85□□□□□ -0.51
CCNL1-205ENST00000464575 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
CCNL1-205ENST00000464575 CLCN6P51797 869 aa11.8□□□□□ -0.52
CCNL1-205ENST00000464575 PABPN1Q86U42 306 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCNL1-205ENST00000464575 DCBLD2Q96PD2 775 aa11.74□□□□□ -0.53
CCNL1-205ENST00000464575 FARP1Q9Y4F1 1045 aaPredicted RBP11.74□□□□□ -0.53
CCNL1-205ENST00000464575 OTUD5Q96G74 571 aa11.63□□□□□ -0.55
CCNL1-205ENST00000464575 ZNF579Q8NAF0 562 aaKnown RBP11.6□□□□□ -0.55
CCNL1-205ENST00000464575 POTEMA6NI47 508 aa11.57□□□□□ -0.56
CCNL1-205ENST00000464575 ZRANB1Q9UGI0 708 aa11.56□□□□□ -0.56
CCNL1-205ENST00000464575 POTEB2H3BUK9 544 aa11.55□□□□□ -0.56
CCNL1-205ENST00000464575 POTEGQ6S5H5 508 aa11.53□□□□□ -0.56
CCNL1-205ENST00000464575 GALR2O43603 387 aaPredicted RBP11.51□□□□□ -0.57
CCNL1-205ENST00000464575 EHMT2Q96KQ7 1210 aa11.45□□□□□ -0.58
CCNL1-205ENST00000464575 PCDH10Q9P2E7 1040 aa11.44□□□□□ -0.58
CCNL1-205ENST00000464575 CREBZFQ9NS37 354 aa11.41□□□□□ -0.58
CCNL1-205ENST00000464575 PELP1Q8IZL8 1130 aaKnown RBP11.37□□□□□ -0.59
CCNL1-205ENST00000464575 PHF12Q96QT6 1004 aa11.33□□□□□ -0.6
CCNL1-205ENST00000464575 PAK3O75914 559 aaPredicted RBP11.31□□□□□ -0.6
CCNL1-205ENST00000464575 POTEJP0CG39 1038 aa11.29□□□□□ -0.6
CCNL1-205ENST00000464575 STAG3Q9UJ98 1225 aa11.29□□□□□ -0.6
CCNL1-205ENST00000464575 METRNQ9UJH8 293 aa11.26□□□□□ -0.61
CCNL1-205ENST00000464575 C7P10643 843 aa11.24□□□□□ -0.61
CCNL1-205ENST00000464575 LCE2DQ5TA82 110 aaPredicted RBP11.24□□□□□ -0.61
CCNL1-205ENST00000464575 ASTLQ6HA08 431 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms