Protein–RNA interactions for Protein: O95696

BRD1, Bromodomain-containing protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1O95696 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
BRD1O95696 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
BRD1O95696 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
BRD1O95696 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
BRD1O95696 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
BRD1O95696 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
BRD1O95696 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.77■■■□□ 2.68
BRD1O95696 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
BRD1O95696 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.76■■■□□ 2.67
BRD1O95696 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
BRD1O95696 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
BRD1O95696 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
BRD1O95696 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
BRD1O95696 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
BRD1O95696 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.71■■■□□ 2.67
BRD1O95696 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
BRD1O95696 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.71■■■□□ 2.67
BRD1O95696 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.7■■■□□ 2.67
BRD1O95696 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.69■■■□□ 2.66
BRD1O95696 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
BRD1O95696 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
BRD1O95696 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
BRD1O95696 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
BRD1O95696 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
BRD1O95696 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
BRD1O95696 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.66■■■□□ 2.66
BRD1O95696 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.65■■■□□ 2.66
BRD1O95696 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.65■■■□□ 2.66
BRD1O95696 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
BRD1O95696 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.64■■■□□ 2.65
BRD1O95696 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
BRD1O95696 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
BRD1O95696 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
BRD1O95696 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
BRD1O95696 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
BRD1O95696 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
BRD1O95696 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
BRD1O95696 AC139426.1-201ENST00000568218 2529 ntBASIC31.6■■■□□ 2.65
BRD1O95696 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
BRD1O95696 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
BRD1O95696 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.57■■■□□ 2.64
BRD1O95696 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
BRD1O95696 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.56■■■□□ 2.64
BRD1O95696 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.56■■■□□ 2.64
BRD1O95696 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
BRD1O95696 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
BRD1O95696 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
BRD1O95696 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
BRD1O95696 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
BRD1O95696 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
BRD1O95696 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
BRD1O95696 DYNLL1-208ENST00000550178 581 ntBASIC31.53■■■□□ 2.64
BRD1O95696 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.52■■■□□ 2.64
BRD1O95696 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
BRD1O95696 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
BRD1O95696 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.5■■■□□ 2.63
BRD1O95696 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.48■■■□□ 2.63
BRD1O95696 ST7-AS1-201ENST00000456775 1889 ntBASIC31.48■■■□□ 2.63
BRD1O95696 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
BRD1O95696 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
BRD1O95696 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
BRD1O95696 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
BRD1O95696 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
BRD1O95696 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.43■■■□□ 2.62
BRD1O95696 AL161658.1-201ENST00000623641 1967 ntBASIC31.43■■■□□ 2.62
BRD1O95696 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.42■■■□□ 2.62
BRD1O95696 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
BRD1O95696 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
BRD1O95696 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
BRD1O95696 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
BRD1O95696 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.4■■■□□ 2.62
BRD1O95696 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
BRD1O95696 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
BRD1O95696 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
BRD1O95696 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.39■■■□□ 2.62
BRD1O95696 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
BRD1O95696 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
BRD1O95696 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.36■■■□□ 2.61
BRD1O95696 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
BRD1O95696 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
BRD1O95696 AL031258.1-201ENST00000623562 325 ntBASIC31.33■■■□□ 2.61
BRD1O95696 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
BRD1O95696 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
BRD1O95696 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
BRD1O95696 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
BRD1O95696 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
BRD1O95696 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
BRD1O95696 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
BRD1O95696 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.27■■■□□ 2.6
BRD1O95696 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.27■■■□□ 2.6
BRD1O95696 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
BRD1O95696 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
BRD1O95696 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
BRD1O95696 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.25■■■□□ 2.59
BRD1O95696 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
BRD1O95696 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
BRD1O95696 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.24■■■□□ 2.59
BRD1O95696 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
BRD1O95696 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
BRD1O95696 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms