RNA–Protein interactions for RNA: ENST00000422806.1

NKX1-1-201, Transcript of NK1 homeobox 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX1-1, Length 1,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1-201ENST00000422806 NISCHQ9Y2I1 1504 aa70.52■■■■■ 8.88
NKX1-1-201ENST00000422806 CCDC180Q9P1Z9 1646 aa63.28■■■■■ 7.72
NKX1-1-201ENST00000422806 ABCC9O60706 1549 aa63.21■■■■■ 7.71
NKX1-1-201ENST00000422806 RB1CC1Q8TDY2 1594 aa60.24■■■■■ 7.23
NKX1-1-201ENST00000422806 NACADO15069 1562 aa59.86■■■■■ 7.17
NKX1-1-201ENST00000422806 DCAF8L2P0C7V8 631 aa59.48■■■■■ 7.11
NKX1-1-201ENST00000422806 DNAJC5BQ9UF47 199 aa59.24■■■■■ 7.07
NKX1-1-201ENST00000422806 MYO15BQ96JP2 1530 aa59.1■■■■■ 7.05
NKX1-1-201ENST00000422806 PABPN1Q86U42 306 aaKnown RBP eCLIP58.8■■■■■ 7
NKX1-1-201ENST00000422806 UNC13AQ9UPW8 1703 aa58.73■■■■■ 6.99
NKX1-1-201ENST00000422806 ZCCHC6Q5VYS8 1495 aaKnown RBP58.57■■■■■ 6.97
NKX1-1-201ENST00000422806 BICRAQ9NZM4 1560 aa58.42■■■■■ 6.94
NKX1-1-201ENST00000422806 DCAF1Q9Y4B6 1507 aa58.31■■■■■ 6.92
NKX1-1-201ENST00000422806 SHROOM4Q9ULL8 1493 aa57.85■■■■■ 6.85
NKX1-1-201ENST00000422806 SCRIBQ14160 1630 aa57.57■■■■■ 6.81
NKX1-1-201ENST00000422806 CC2D2AQ9P2K1 1620 aa57.12■■■■■ 6.73
NKX1-1-201ENST00000422806 EIF4G1Q04637 1599 aaKnown RBP57.03■■■■■ 6.72
NKX1-1-201ENST00000422806 CECR2Q9BXF3 1484 aa57■■■■■ 6.72
NKX1-1-201ENST00000422806 NCAPD3P42695 1498 aa55.25■■■■■ 6.44
NKX1-1-201ENST00000422806 ATAD2BQ9ULI0 1458 aa55.05■■■■■ 6.4
NKX1-1-201ENST00000422806 SMARCA4P51532 1647 aa54.97■■■■■ 6.39
NKX1-1-201ENST00000422806 SMARCA2P51531 1590 aa54.94■■■■■ 6.39
NKX1-1-201ENST00000422806 HMGXB3Q12766 1538 aa54.86■■■■■ 6.37
NKX1-1-201ENST00000422806 BAZ1AQ9NRL2 1556 aaPredicted RBP54.74■■■■■ 6.35
NKX1-1-201ENST00000422806 ERCC6Q03468 1493 aa54.64■■■■■ 6.34
NKX1-1-201ENST00000422806 CUX2O14529 1486 aa54.61■■■■■ 6.33
NKX1-1-201ENST00000422806 DNAJC5Q9H3Z4 198 aa54.52■■■■■ 6.32
NKX1-1-201ENST00000422806 BAZ1BQ9UIG0 1483 aaKnown RBP54.52■■■■■ 6.32
NKX1-1-201ENST00000422806 PEG3Q9GZU2 1588 aa54.51■■■■■ 6.32
NKX1-1-201ENST00000422806 MROH2BQ7Z745 1585 aa54.35■■■■■ 6.29
NKX1-1-201ENST00000422806 NESP48681 1621 aa54.26■■■■■ 6.28
NKX1-1-201ENST00000422806 LAMC3Q9Y6N6 1575 aa54■■■■■ 6.24
NKX1-1-201ENST00000422806 THOC2Q8NI27 1593 aaKnown RBP53.79■■■■■ 6.2
NKX1-1-201ENST00000422806 WIZO95785 1651 aa53.74■■■■■ 6.19
NKX1-1-201ENST00000422806 PDS5BQ9NTI5 1447 aa53.72■■■■■ 6.19
NKX1-1-201ENST00000422806 CADPSQ9ULU8 1353 aa53.56■■■■■ 6.16
NKX1-1-201ENST00000422806 KIF21AQ7Z4S6 1674 aa53.56■■■■■ 6.16
NKX1-1-201ENST00000422806 RSF1Q96T23 1441 aaPredicted RBP53.55■■■■■ 6.16
NKX1-1-201ENST00000422806 MRC2Q9UBG0 1479 aa53.23■■■■■ 6.11
NKX1-1-201ENST00000422806 WDR62O43379 1518 aa53.11■■■■■ 6.09
NKX1-1-201ENST00000422806 TOP2AP11388 1531 aaKnown RBP53.11■■■■■ 6.09
NKX1-1-201ENST00000422806 CEP164Q9UPV0 1460 aa53.01■■■■■ 6.08
NKX1-1-201ENST00000422806 CFTRP13569 1480 aa52.95■■■■■ 6.07
NKX1-1-201ENST00000422806 FANCD2Q9BXW9 1451 aa52.93■■■■■ 6.06
NKX1-1-201ENST00000422806 CCDC88BA6NC98 1476 aa52.56■■■■■ 6
NKX1-1-201ENST00000422806 URB2Q14146 1524 aaKnown RBP52.46■■■■■ 5.99
NKX1-1-201ENST00000422806 PRDM2Q13029 1718 aa52.35■■■■■ 5.97
NKX1-1-201ENST00000422806 OSCARQ8IYS5 282 aa52.05■■■■■ 5.92
NKX1-1-201ENST00000422806 TRIM41Q8WV44 630 aa52.04■■■■■ 5.92
NKX1-1-201ENST00000422806 SUPT5HO00267 1087 aaKnown RBP52■■■■■ 5.91
NKX1-1-201ENST00000422806 IFT140Q96RY7 1462 aa51.98■■■■■ 5.91
NKX1-1-201ENST00000422806 TOPBP1Q92547 1522 aa51.92■■■■■ 5.9
NKX1-1-201ENST00000422806 ABCC8Q09428 1581 aa51.89■■■■■ 5.9
NKX1-1-201ENST00000422806 ZNF608Q9ULD9 1512 aaPredicted RBP51.8■■■■■ 5.88
NKX1-1-201ENST00000422806 DNMBPQ6XZF7 1577 aa51.74■■■■■ 5.87
NKX1-1-201ENST00000422806 EIF4G3O43432 1585 aaKnown RBP51.54■■■■■ 5.84
NKX1-1-201ENST00000422806 TARBP1Q13395 1621 aaKnown RBP51.44■■■■■ 5.83
NKX1-1-201ENST00000422806 POLA1P09884 1462 aaPredicted RBP51.4■■■■■ 5.82
NKX1-1-201ENST00000422806 RIMBP3CA6NJZ7 1639 aa51.33■■■■■ 5.81
NKX1-1-201ENST00000422806 RIMBP3BA6NNM3 1639 aa51.33■■■■■ 5.81
NKX1-1-201ENST00000422806 RIMBP3Q9UFD9 1639 aa51.33■■■■■ 5.81
NKX1-1-201ENST00000422806 AQRO60306 1485 aaKnown RBP eCLIP51.32■■■■■ 5.81
NKX1-1-201ENST00000422806 ARHGEF11O15085 1522 aa51.22■■■■■ 5.79
NKX1-1-201ENST00000422806 RAD54L2Q9Y4B4 1467 aa51.15■■■■■ 5.78
NKX1-1-201ENST00000422806 SOGA1O94964 1423 aa51.14■■■■■ 5.78
NKX1-1-201ENST00000422806 CHD1O14646 1710 aa51.1■■■■■ 5.77
NKX1-1-201ENST00000422806 FGD5Q6ZNL6 1462 aa51.05■■■■■ 5.76
NKX1-1-201ENST00000422806 WDR97A6NE52 1622 aa51.05■■■■■ 5.76
NKX1-1-201ENST00000422806 CUX1P39880 1505 aa51.02■■■■■ 5.76
NKX1-1-201ENST00000422806 TDRD9Q8NDG6 1382 aaKnown RBP51.01■■■■■ 5.76
NKX1-1-201ENST00000422806 FBLN2P98095 1184 aa50.97■■■■■ 5.75
NKX1-1-201ENST00000422806 SNAPC4Q5SXM2 1469 aa50.85■■■■■ 5.73
NKX1-1-201ENST00000422806 MAGI1Q96QZ7 1491 aaPredicted RBP50.78■■■■■ 5.72
NKX1-1-201ENST00000422806 CYB5RLQ6IPT4 315 aa50.78■■■■■ 5.72
NKX1-1-201ENST00000422806 GRIN2BQ13224 1484 aa50.75■■■■■ 5.71
NKX1-1-201ENST00000422806 ARAP1Q96P48 1450 aa50.71■■■■■ 5.71
NKX1-1-201ENST00000422806 CHMP7Q8WUX9 453 aaPredicted RBP50.65■■■■■ 5.7
NKX1-1-201ENST00000422806 CLASP1Q7Z460 1538 aa50.61■■■■■ 5.69
NKX1-1-201ENST00000422806 SYNJ1O43426 1573 aa50.6■■■■■ 5.69
NKX1-1-201ENST00000422806 SYNJ2O15056 1496 aa50.59■■■■■ 5.69
NKX1-1-201ENST00000422806 GAPVD1Q14C86 1478 aa50.54■■■■■ 5.68
NKX1-1-201ENST00000422806 WRNQ14191 1432 aaPredicted RBP eCLIP50.53■■■■■ 5.68
NKX1-1-201ENST00000422806 ABCA10Q8WWZ4 1543 aa50.53■■■■■ 5.68
NKX1-1-201ENST00000422806 PBRM1Q86U86 1689 aa50.46■■■■■ 5.67
NKX1-1-201ENST00000422806 ABCA5Q8WWZ7 1642 aa50.42■■■■■ 5.66
NKX1-1-201ENST00000422806 TOP2BQ02880 1626 aa50.41■■■■■ 5.66
NKX1-1-201ENST00000422806 BIVM-ERCC5R4GMW8 1640 aa50.37■■■■■ 5.65
NKX1-1-201ENST00000422806 TRHP20396 242 aaPredicted RBP50.21■■■■■ 5.63
NKX1-1-201ENST00000422806 GRIN2AQ12879 1464 aa50.08■■■■■ 5.61
NKX1-1-201ENST00000422806 ADAMTS12P58397 1594 aa50.05■■■■■ 5.6
NKX1-1-201ENST00000422806 NUP160Q12769 1436 aa49.94■■■■■ 5.59
NKX1-1-201ENST00000422806 FHAD1B1AJZ9 1412 aa49.94■■■■■ 5.58
NKX1-1-201ENST00000422806 ERICH3Q5RHP9 1530 aa49.9■■■■■ 5.58
NKX1-1-201ENST00000422806 CEP170Q5SW79 1584 aa49.86■■■■■ 5.57
NKX1-1-201ENST00000422806 ERCC6L2Q5T890 1561 aa49.72■■■■■ 5.55
NKX1-1-201ENST00000422806 SHROOM2Q13796 1616 aa49.68■■■■■ 5.54
NKX1-1-201ENST00000422806 KIF27Q86VH2 1401 aa49.56■■■■■ 5.52
NKX1-1-201ENST00000422806 IGF1RP08069 1367 aa49.41■■■■■ 5.5
NKX1-1-201ENST00000422806 PRG4Q92954 1404 aaPredicted RBP49.41■■■■■ 5.5
NKX1-1-201ENST00000422806 JPH4Q96JJ6 628 aa49.38■■■■■ 5.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms