RNA–Protein interactions for RNA: ENST00000560471.5

SHF-206, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,499 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-206ENST00000560471 NISCHQ9Y2I1 1504 aa54.15■■■■■ 6.26
SHF-206ENST00000560471 SHROOM4Q9ULL8 1493 aa46.17■■■■■ 4.98
SHF-206ENST00000560471 CCDC180Q9P1Z9 1646 aa46.03■■■■■ 4.96
SHF-206ENST00000560471 ZCCHC6Q5VYS8 1495 aaKnown RBP45.82■■■■■ 4.93
SHF-206ENST00000560471 SUPT5HO00267 1087 aaKnown RBP45.27■■■■■ 4.84
SHF-206ENST00000560471 DCAF8L2P0C7V8 631 aa44.84■■■■■ 4.77
SHF-206ENST00000560471 DCAF1Q9Y4B6 1507 aa44.41■■■■■ 4.7
SHF-206ENST00000560471 CHIC1Q5VXU3 224 aa44.04■■■■■ 4.64
SHF-206ENST00000560471 MYO15BQ96JP2 1530 aa43.93■■■■■ 4.62
SHF-206ENST00000560471 ABCC9O60706 1549 aa43.25■■■■■ 4.51
SHF-206ENST00000560471 SCRIBQ14160 1630 aa43.17■■■■■ 4.5
SHF-206ENST00000560471 RSF1Q96T23 1441 aaPredicted RBP42.86■■■■■ 4.45
SHF-206ENST00000560471 LOC105371045A0A1W2PR82 267 aa42.74■■■■■ 4.43
SHF-206ENST00000560471 HRCP23327 699 aa42.7■■■■■ 4.43
SHF-206ENST00000560471 PCGF6Q9BYE7 350 aa42.67■■■■■ 4.42
SHF-206ENST00000560471 NACADO15069 1562 aa42.54■■■■■ 4.4
SHF-206ENST00000560471 RB1CC1Q8TDY2 1594 aa42.44■■■■■ 4.38
SHF-206ENST00000560471 CECR2Q9BXF3 1484 aa42.26■■■■■ 4.36
SHF-206ENST00000560471 TRIM41Q8WV44 630 aa42.15■■■■■ 4.34
SHF-206ENST00000560471 MROH2BQ7Z745 1585 aa42.12■■■■■ 4.33
SHF-206ENST00000560471 WIZO95785 1651 aa41.9■■■■■ 4.3
SHF-206ENST00000560471 TRIM26Q12899 539 aaPredicted RBP41.85■■■■■ 4.29
SHF-206ENST00000560471 PPARGC1BQ86YN6 1023 aaKnown RBP41.84■■■■■ 4.29
SHF-206ENST00000560471 FAM9AQ8IZU1 332 aaPredicted RBP41.83■■■■■ 4.29
SHF-206ENST00000560471 BAZ1AQ9NRL2 1556 aaPredicted RBP41.63■■■■■ 4.26
SHF-206ENST00000560471 EHMT2Q96KQ7 1210 aa41.48■■■■■ 4.23
SHF-206ENST00000560471 EIF4G1Q04637 1599 aaKnown RBP41.37■■■■■ 4.21
SHF-206ENST00000560471 UNC13AQ9UPW8 1703 aa41.28■■■■■ 4.2
SHF-206ENST00000560471 SMARCA4P51532 1647 aa41.24■■■■■ 4.19
SHF-206ENST00000560471 TOP2AP11388 1531 aaKnown RBP41.23■■■■■ 4.19
SHF-206ENST00000560471 CCDC88BA6NC98 1476 aa41.06■■■■■ 4.16
SHF-206ENST00000560471 SMARCA2P51531 1590 aa41.02■■■■■ 4.16
SHF-206ENST00000560471 ABCC8Q09428 1581 aa40.97■■■■■ 4.15
SHF-206ENST00000560471 ZEB1P37275 1124 aaPredicted RBP40.9■■■■■ 4.14
SHF-206ENST00000560471 PABPN1Q86U42 306 aaKnown RBP eCLIP40.77■■■■■ 4.12
SHF-206ENST00000560471 BICRAQ9NZM4 1560 aa40.75■■■■■ 4.11
SHF-206ENST00000560471 SOGA1O94964 1423 aa40.58■■■■■ 4.09
SHF-206ENST00000560471 PEG3Q9GZU2 1588 aa40.44■■■■■ 4.06
SHF-206ENST00000560471 RUSC2Q8N2Y8 1516 aa40.4■■■■■ 4.06
SHF-206ENST00000560471 CEP162Q5TB80 1403 aa40.39■■■■■ 4.06
SHF-206ENST00000560471 WRNQ14191 1432 aaPredicted RBP eCLIP40.34■■■■■ 4.05
SHF-206ENST00000560471 EEA1Q15075 1411 aa40.33■■■■■ 4.05
SHF-206ENST00000560471 CSRNP3Q8WYN3 585 aa40.32■■■■■ 4.04
SHF-206ENST00000560471 TNIKQ9UKE5 1360 aa40.31■■■■■ 4.04
SHF-206ENST00000560471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.2■■■■■ 4.03
SHF-206ENST00000560471 ATAD2BQ9ULI0 1458 aa40.17■■■■■ 4.02
SHF-206ENST00000560471 TTBK1Q5TCY1 1321 aaPredicted RBP40.15■■■■■ 4.02
SHF-206ENST00000560471 UBTFP17480 764 aaKnown RBP40.15■■■■■ 4.02
SHF-206ENST00000560471 SYNJ1O43426 1573 aa40.09■■■■■ 4.01
SHF-206ENST00000560471 GOLGA3Q08378 1498 aa40.09■■■■■ 4.01
SHF-206ENST00000560471 CCER1Q8TC90 406 aaPredicted RBP40.07■■■■■ 4.01
SHF-206ENST00000560471 BAZ1BQ9UIG0 1483 aaKnown RBP40.06■■■■■ 4
SHF-206ENST00000560471 CEP164Q9UPV0 1460 aa39.85■■■■□ 3.97
SHF-206ENST00000560471 KIF21BO75037 1637 aa39.83■■■■□ 3.97
SHF-206ENST00000560471 CLIP1P30622 1438 aa39.63■■■■□ 3.93
SHF-206ENST00000560471 RAPGEF2Q9Y4G8 1499 aa39.59■■■■□ 3.93
SHF-206ENST00000560471 TOP2BQ02880 1626 aa39.57■■■■□ 3.93
SHF-206ENST00000560471 VPS8Q8N3P4 1428 aa39.46■■■■□ 3.91
SHF-206ENST00000560471 BIVM-ERCC5R4GMW8 1640 aa39.44■■■■□ 3.9
SHF-206ENST00000560471 HMGXB3Q12766 1538 aa39.37■■■■□ 3.89
SHF-206ENST00000560471 NCAPD3P42695 1498 aa39.37■■■■□ 3.89
SHF-206ENST00000560471 RANGAP1P46060 587 aaPredicted RBP39.37■■■■□ 3.89
SHF-206ENST00000560471 SCAF1Q9H7N4 1312 aaKnown RBP39.34■■■■□ 3.89
SHF-206ENST00000560471 HNRNPUL2Q1KMD3 747 aaKnown RBP39.29■■■■□ 3.88
SHF-206ENST00000560471 DIEXFQ68CQ4 756 aaKnown RBP39.29■■■■□ 3.88
SHF-206ENST00000560471 APLP2Q06481 763 aa39.22■■■■□ 3.87
SHF-206ENST00000560471 CUX1P39880 1505 aa39.21■■■■□ 3.87
SHF-206ENST00000560471 PRXQ9BXM0 1461 aa39.19■■■■□ 3.86
SHF-206ENST00000560471 ERICH3Q5RHP9 1530 aa39.17■■■■□ 3.86
SHF-206ENST00000560471 CFTRP13569 1480 aa39.07■■■■□ 3.85
SHF-206ENST00000560471 ARAP1Q96P48 1450 aa39.02■■■■□ 3.84
SHF-206ENST00000560471 ZNF316A6NFI3 1004 aaPredicted RBP39.01■■■■□ 3.83
SHF-206ENST00000560471 KIF27Q86VH2 1401 aa38.99■■■■□ 3.83
SHF-206ENST00000560471 ACIN1Q9UKV3 1341 aaKnown RBP38.96■■■■□ 3.83
SHF-206ENST00000560471 NEUROD1Q13562 356 aa38.94■■■■□ 3.82
SHF-206ENST00000560471 KANK4Q5T7N3 995 aaPredicted RBP38.8■■■■□ 3.8
SHF-206ENST00000560471 PRDM2Q13029 1718 aa38.77■■■■□ 3.8
SHF-206ENST00000560471 CENPBP07199 599 aaPredicted RBP38.71■■■■□ 3.79
SHF-206ENST00000560471 ARHGAP35Q9NRY4 1499 aa38.67■■■■□ 3.78
SHF-206ENST00000560471 CUX2O14529 1486 aa38.64■■■■□ 3.78
SHF-206ENST00000560471 CADPSQ9ULU8 1353 aa38.62■■■■□ 3.77
SHF-206ENST00000560471 IGF1RP08069 1367 aa38.58■■■■□ 3.77
SHF-206ENST00000560471 DHX57Q6P158 1386 aaKnown RBP38.55■■■■□ 3.76
SHF-206ENST00000560471 RRBP1Q9P2E9 1410 aaKnown RBP38.55■■■■□ 3.76
SHF-206ENST00000560471 GTF3C3Q9Y5Q9 886 aa38.51■■■■□ 3.76
SHF-206ENST00000560471 FGD5Q6ZNL6 1462 aa38.5■■■■□ 3.75
SHF-206ENST00000560471 MIER1Q8N108 512 aa38.47■■■■□ 3.75
SHF-206ENST00000560471 CLSPNQ9HAW4 1339 aa38.45■■■■□ 3.75
SHF-206ENST00000560471 CARMIL1Q5VZK9 1371 aa38.41■■■■□ 3.74
SHF-206ENST00000560471 CC2D2AQ9P2K1 1620 aa38.38■■■■□ 3.73
SHF-206ENST00000560471 CCNB3Q8WWL7 1395 aa38.38■■■■□ 3.73
SHF-206ENST00000560471 PELP1Q8IZL8 1130 aaKnown RBP38.38■■■■□ 3.73
SHF-206ENST00000560471 YTHDC1Q96MU7 727 aaKnown RBP38.37■■■■□ 3.73
SHF-206ENST00000560471 FANCD2Q9BXW9 1451 aa38.27■■■■□ 3.72
SHF-206ENST00000560471 TIAM1Q13009 1591 aa38.26■■■■□ 3.72
SHF-206ENST00000560471 ITGAEP38570 1179 aa38.24■■■■□ 3.71
SHF-206ENST00000560471 MAP3K1Q13233 1512 aa38.19■■■■□ 3.7
SHF-206ENST00000560471 RAD54L2Q9Y4B4 1467 aa38.12■■■■□ 3.69
SHF-206ENST00000560471 LRRC9Q6ZRR7 1453 aa38.1■■■■□ 3.69
SHF-206ENST00000560471 DNMBPQ6XZF7 1577 aa38.1■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms