Protein–RNA interactions for Protein: A6NNE9

MARCH11, E3 ubiquitin-protein ligase MARCH11, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH11A6NNE9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MARCH11A6NNE9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MARCH11A6NNE9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
MARCH11A6NNE9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
MARCH11A6NNE9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MARCH11A6NNE9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.98■■□□□ 1.11
MARCH11A6NNE9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MARCH11A6NNE9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
MARCH11A6NNE9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MARCH11A6NNE9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
MARCH11A6NNE9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
MARCH11A6NNE9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MARCH11A6NNE9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MARCH11A6NNE9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MARCH11A6NNE9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MARCH11A6NNE9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MARCH11A6NNE9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MARCH11A6NNE9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MARCH11A6NNE9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
MARCH11A6NNE9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.91■■□□□ 1.1
MARCH11A6NNE9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MARCH11A6NNE9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MARCH11A6NNE9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MARCH11A6NNE9 ABCB10P3-201ENST00000561950 2166 ntBASIC21.9■■□□□ 1.1
MARCH11A6NNE9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MARCH11A6NNE9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
MARCH11A6NNE9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.1
MARCH11A6NNE9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MARCH11A6NNE9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MARCH11A6NNE9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.88■■□□□ 1.09
MARCH11A6NNE9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MARCH11A6NNE9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MARCH11A6NNE9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MARCH11A6NNE9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
MARCH11A6NNE9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MARCH11A6NNE9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
MARCH11A6NNE9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MARCH11A6NNE9 AL031258.1-201ENST00000623562 325 ntBASIC21.86■■□□□ 1.09
MARCH11A6NNE9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MARCH11A6NNE9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MARCH11A6NNE9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MARCH11A6NNE9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MARCH11A6NNE9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MARCH11A6NNE9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MARCH11A6NNE9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.82■■□□□ 1.08
MARCH11A6NNE9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MARCH11A6NNE9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MARCH11A6NNE9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
MARCH11A6NNE9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MARCH11A6NNE9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
MARCH11A6NNE9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
MARCH11A6NNE9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.79■■□□□ 1.08
MARCH11A6NNE9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.79■■□□□ 1.08
MARCH11A6NNE9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MARCH11A6NNE9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MARCH11A6NNE9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MARCH11A6NNE9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MARCH11A6NNE9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.78■■□□□ 1.08
MARCH11A6NNE9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MARCH11A6NNE9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
MARCH11A6NNE9 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MARCH11A6NNE9 AP002365.1-201ENST00000603448 772 ntBASIC21.77■■□□□ 1.08
MARCH11A6NNE9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MARCH11A6NNE9 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
MARCH11A6NNE9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MARCH11A6NNE9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.75■■□□□ 1.07
MARCH11A6NNE9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MARCH11A6NNE9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
MARCH11A6NNE9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
MARCH11A6NNE9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
MARCH11A6NNE9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MARCH11A6NNE9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MARCH11A6NNE9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MARCH11A6NNE9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MARCH11A6NNE9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MARCH11A6NNE9 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MARCH11A6NNE9 ST7-AS1-201ENST00000456775 1889 ntBASIC21.73■■□□□ 1.07
MARCH11A6NNE9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MARCH11A6NNE9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MARCH11A6NNE9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
MARCH11A6NNE9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MARCH11A6NNE9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MARCH11A6NNE9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MARCH11A6NNE9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
MARCH11A6NNE9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.69■■□□□ 1.06
MARCH11A6NNE9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
MARCH11A6NNE9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MARCH11A6NNE9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MARCH11A6NNE9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MARCH11A6NNE9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MARCH11A6NNE9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MARCH11A6NNE9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.65■■□□□ 1.06
MARCH11A6NNE9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MARCH11A6NNE9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.65■■□□□ 1.06
MARCH11A6NNE9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MARCH11A6NNE9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
MARCH11A6NNE9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
MARCH11A6NNE9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MARCH11A6NNE9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
MARCH11A6NNE9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms