RNA–Protein interactions for RNA: ENST00000373001.3

RRAGC-201, Transcript of Ras related GTP binding C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRAGC, Length 2,732 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRAGC-201ENST00000373001 NISCHQ9Y2I1 1504 aa54.51■■■■■ 6.32
RRAGC-201ENST00000373001 SHROOM4Q9ULL8 1493 aa47.04■■■■■ 5.12
RRAGC-201ENST00000373001 CCDC180Q9P1Z9 1646 aa46.11■■■■■ 4.97
RRAGC-201ENST00000373001 ZCCHC6Q5VYS8 1495 aaKnown RBP46.08■■■■■ 4.97
RRAGC-201ENST00000373001 SUPT5HO00267 1087 aaKnown RBP46.05■■■■■ 4.96
RRAGC-201ENST00000373001 DCAF8L2P0C7V8 631 aa45.72■■■■■ 4.91
RRAGC-201ENST00000373001 CHIC1Q5VXU3 224 aa44.58■■■■■ 4.73
RRAGC-201ENST00000373001 MYO15BQ96JP2 1530 aa44.57■■■■■ 4.73
RRAGC-201ENST00000373001 DCAF1Q9Y4B6 1507 aa44.43■■■■■ 4.7
RRAGC-201ENST00000373001 SCRIBQ14160 1630 aa43.67■■■■■ 4.58
RRAGC-201ENST00000373001 LOC105371045A0A1W2PR82 267 aa43.51■■■■■ 4.56
RRAGC-201ENST00000373001 ABCC9O60706 1549 aa43.49■■■■■ 4.55
RRAGC-201ENST00000373001 PCGF6Q9BYE7 350 aa43.37■■■■■ 4.53
RRAGC-201ENST00000373001 RSF1Q96T23 1441 aaPredicted RBP43.25■■■■■ 4.51
RRAGC-201ENST00000373001 HRCP23327 699 aa43.15■■■■■ 4.5
RRAGC-201ENST00000373001 RB1CC1Q8TDY2 1594 aa42.92■■■■■ 4.46
RRAGC-201ENST00000373001 CECR2Q9BXF3 1484 aa42.79■■■■■ 4.44
RRAGC-201ENST00000373001 PPARGC1BQ86YN6 1023 aaKnown RBP42.68■■■■■ 4.42
RRAGC-201ENST00000373001 NACADO15069 1562 aa42.67■■■■■ 4.42
RRAGC-201ENST00000373001 TRIM41Q8WV44 630 aa42.67■■■■■ 4.42
RRAGC-201ENST00000373001 FAM9AQ8IZU1 332 aaPredicted RBP42.66■■■■■ 4.42
RRAGC-201ENST00000373001 MROH2BQ7Z745 1585 aa42.55■■■■■ 4.4
RRAGC-201ENST00000373001 EHMT2Q96KQ7 1210 aa42.55■■■■■ 4.4
RRAGC-201ENST00000373001 WIZO95785 1651 aa42.36■■■■■ 4.37
RRAGC-201ENST00000373001 TRIM26Q12899 539 aaPredicted RBP42.24■■■■■ 4.35
RRAGC-201ENST00000373001 BAZ1AQ9NRL2 1556 aaPredicted RBP41.86■■■■■ 4.29
RRAGC-201ENST00000373001 UNC13AQ9UPW8 1703 aa41.66■■■■■ 4.26
RRAGC-201ENST00000373001 EIF4G1Q04637 1599 aaKnown RBP41.62■■■■■ 4.25
RRAGC-201ENST00000373001 SMARCA4P51532 1647 aa41.54■■■■■ 4.24
RRAGC-201ENST00000373001 ABCC8Q09428 1581 aa41.52■■■■■ 4.24
RRAGC-201ENST00000373001 PABPN1Q86U42 306 aaKnown RBP eCLIP41.5■■■■■ 4.23
RRAGC-201ENST00000373001 TOP2AP11388 1531 aaKnown RBP41.46■■■■■ 4.23
RRAGC-201ENST00000373001 CCDC88BA6NC98 1476 aa41.45■■■■■ 4.23
RRAGC-201ENST00000373001 SMARCA2P51531 1590 aa41.34■■■■■ 4.21
RRAGC-201ENST00000373001 TTBK1Q5TCY1 1321 aaPredicted RBP41.12■■■■■ 4.17
RRAGC-201ENST00000373001 SOGA1O94964 1423 aa41.1■■■■■ 4.17
RRAGC-201ENST00000373001 BICRAQ9NZM4 1560 aa41.09■■■■■ 4.17
RRAGC-201ENST00000373001 ZEB1P37275 1124 aaPredicted RBP41.07■■■■■ 4.17
RRAGC-201ENST00000373001 RUSC2Q8N2Y8 1516 aa40.98■■■■■ 4.15
RRAGC-201ENST00000373001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.89■■■■■ 4.14
RRAGC-201ENST00000373001 CEP162Q5TB80 1403 aa40.79■■■■■ 4.12
RRAGC-201ENST00000373001 CSRNP3Q8WYN3 585 aa40.72■■■■■ 4.11
RRAGC-201ENST00000373001 UBTFP17480 764 aaKnown RBP40.71■■■■■ 4.11
RRAGC-201ENST00000373001 CCER1Q8TC90 406 aaPredicted RBP40.61■■■■■ 4.09
RRAGC-201ENST00000373001 WRNQ14191 1432 aaPredicted RBP eCLIP40.6■■■■■ 4.09
RRAGC-201ENST00000373001 TNIKQ9UKE5 1360 aa40.57■■■■■ 4.09
RRAGC-201ENST00000373001 PEG3Q9GZU2 1588 aa40.54■■■■■ 4.08
RRAGC-201ENST00000373001 SYNJ1O43426 1573 aa40.49■■■■■ 4.07
RRAGC-201ENST00000373001 ATAD2BQ9ULI0 1458 aa40.49■■■■■ 4.07
RRAGC-201ENST00000373001 EEA1Q15075 1411 aa40.42■■■■■ 4.06
RRAGC-201ENST00000373001 BAZ1BQ9UIG0 1483 aaKnown RBP40.39■■■■■ 4.06
RRAGC-201ENST00000373001 GOLGA3Q08378 1498 aa40.36■■■■■ 4.05
RRAGC-201ENST00000373001 RANGAP1P46060 587 aaPredicted RBP40.26■■■■■ 4.04
RRAGC-201ENST00000373001 CEP164Q9UPV0 1460 aa40.09■■■■■ 4.01
RRAGC-201ENST00000373001 RAPGEF2Q9Y4G8 1499 aa40.04■■■■■ 4
RRAGC-201ENST00000373001 CLIP1P30622 1438 aa40.01■■■■□ 3.99
RRAGC-201ENST00000373001 KIF21BO75037 1637 aa40■■■■□ 3.99
RRAGC-201ENST00000373001 HNRNPUL2Q1KMD3 747 aaKnown RBP39.94■■■■□ 3.98
RRAGC-201ENST00000373001 SCAF1Q9H7N4 1312 aaKnown RBP39.93■■■■□ 3.98
RRAGC-201ENST00000373001 TOP2BQ02880 1626 aa39.81■■■■□ 3.96
RRAGC-201ENST00000373001 DIEXFQ68CQ4 756 aaKnown RBP39.77■■■■□ 3.96
RRAGC-201ENST00000373001 VPS8Q8N3P4 1428 aa39.75■■■■□ 3.95
RRAGC-201ENST00000373001 BIVM-ERCC5R4GMW8 1640 aa39.63■■■■□ 3.93
RRAGC-201ENST00000373001 APLP2Q06481 763 aa39.63■■■■□ 3.93
RRAGC-201ENST00000373001 CUX1P39880 1505 aa39.57■■■■□ 3.93
RRAGC-201ENST00000373001 NCAPD3P42695 1498 aa39.57■■■■□ 3.93
RRAGC-201ENST00000373001 NEUROD1Q13562 356 aa39.52■■■■□ 3.92
RRAGC-201ENST00000373001 HMGXB3Q12766 1538 aa39.5■■■■□ 3.91
RRAGC-201ENST00000373001 PRXQ9BXM0 1461 aa39.46■■■■□ 3.91
RRAGC-201ENST00000373001 ZNF316A6NFI3 1004 aaPredicted RBP39.4■■■■□ 3.9
RRAGC-201ENST00000373001 ACIN1Q9UKV3 1341 aaKnown RBP39.39■■■■□ 3.9
RRAGC-201ENST00000373001 ARAP1Q96P48 1450 aa39.39■■■■□ 3.9
RRAGC-201ENST00000373001 KANK4Q5T7N3 995 aaPredicted RBP39.37■■■■□ 3.89
RRAGC-201ENST00000373001 CFTRP13569 1480 aa39.32■■■■□ 3.89
RRAGC-201ENST00000373001 ERICH3Q5RHP9 1530 aa39.31■■■■□ 3.88
RRAGC-201ENST00000373001 KIF27Q86VH2 1401 aa39.27■■■■□ 3.88
RRAGC-201ENST00000373001 YTHDC1Q96MU7 727 aaKnown RBP39.11■■■■□ 3.85
RRAGC-201ENST00000373001 GTF3C3Q9Y5Q9 886 aa39.07■■■■□ 3.84
RRAGC-201ENST00000373001 CUX2O14529 1486 aa39.04■■■■□ 3.84
RRAGC-201ENST00000373001 ARHGAP35Q9NRY4 1499 aa39.04■■■■□ 3.84
RRAGC-201ENST00000373001 MIER1Q8N108 512 aa39.04■■■■□ 3.84
RRAGC-201ENST00000373001 CENPBP07199 599 aaPredicted RBP39■■■■□ 3.83
RRAGC-201ENST00000373001 ITGAEP38570 1179 aa38.98■■■■□ 3.83
RRAGC-201ENST00000373001 IGF1RP08069 1367 aa38.95■■■■□ 3.83
RRAGC-201ENST00000373001 DHX57Q6P158 1386 aaKnown RBP38.93■■■■□ 3.82
RRAGC-201ENST00000373001 CADPSQ9ULU8 1353 aa38.92■■■■□ 3.82
RRAGC-201ENST00000373001 PRDM2Q13029 1718 aa38.88■■■■□ 3.81
RRAGC-201ENST00000373001 FGD5Q6ZNL6 1462 aa38.87■■■■□ 3.81
RRAGC-201ENST00000373001 RRBP1Q9P2E9 1410 aaKnown RBP38.79■■■■□ 3.8
RRAGC-201ENST00000373001 P3H3Q8IVL6 736 aa38.77■■■■□ 3.8
RRAGC-201ENST00000373001 CARMIL1Q5VZK9 1371 aa38.77■■■■□ 3.8
RRAGC-201ENST00000373001 CC2D2AQ9P2K1 1620 aa38.76■■■■□ 3.8
RRAGC-201ENST00000373001 CCNB3Q8WWL7 1395 aa38.72■■■■□ 3.79
RRAGC-201ENST00000373001 RAD54L2Q9Y4B4 1467 aa38.62■■■■□ 3.77
RRAGC-201ENST00000373001 ATP1B4Q9UN42 357 aaPredicted RBP38.61■■■■□ 3.77
RRAGC-201ENST00000373001 FANCD2Q9BXW9 1451 aa38.61■■■■□ 3.77
RRAGC-201ENST00000373001 NESP48681 1621 aa38.58■■■■□ 3.77
RRAGC-201ENST00000373001 TIAM1Q13009 1591 aa38.53■■■■□ 3.76
RRAGC-201ENST00000373001 CLSPNQ9HAW4 1339 aa38.53■■■■□ 3.76
RRAGC-201ENST00000373001 PHLDB1Q86UU1 1377 aa38.46■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms