RNA–Protein interactions for RNA: ENST00000230859.7

PAPD7-201, Transcript of Non-canonical poly(A) RNA polymerase PAPD7, humanhuman

TSL 1 (best) BASIC

Gene PAPD7, Length 5,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD7-201ENST00000230859 DCAF8L2P0C7V8 631 aa43.58■■■■■ 4.57
PAPD7-201ENST00000230859 SUPT5HO00267 1087 aaKnown RBP41.07■■■■■ 4.16
PAPD7-201ENST00000230859 NISCHQ9Y2I1 1504 aa40.2■■■■■ 4.03
PAPD7-201ENST00000230859 PELP1Q8IZL8 1130 aaKnown RBP40.09■■■■■ 4.01
PAPD7-201ENST00000230859 SHROOM4Q9ULL8 1493 aa39.98■■■■□ 3.99
PAPD7-201ENST00000230859 APLP2Q06481 763 aa39.85■■■■□ 3.97
PAPD7-201ENST00000230859 EHMT2Q96KQ7 1210 aa39.8■■■■□ 3.96
PAPD7-201ENST00000230859 FAM9AQ8IZU1 332 aaPredicted RBP39.6■■■■□ 3.93
PAPD7-201ENST00000230859 TTBK1Q5TCY1 1321 aaPredicted RBP38.51■■■■□ 3.76
PAPD7-201ENST00000230859 PCGF6Q9BYE7 350 aa38.35■■■■□ 3.73
PAPD7-201ENST00000230859 CCER1Q8TC90 406 aaPredicted RBP38.32■■■■□ 3.72
PAPD7-201ENST00000230859 RANGAP1P46060 587 aaPredicted RBP38.25■■■■□ 3.71
PAPD7-201ENST00000230859 CENPBP07199 599 aaPredicted RBP38.24■■■■□ 3.71
PAPD7-201ENST00000230859 ERICH6Q7L0X2 663 aa38.22■■■■□ 3.71
PAPD7-201ENST00000230859 ATP1B4Q9UN42 357 aaPredicted RBP38.22■■■■□ 3.71
PAPD7-201ENST00000230859 ZEB1P37275 1124 aaPredicted RBP38.19■■■■□ 3.7
PAPD7-201ENST00000230859 TRIM41Q8WV44 630 aa38.17■■■■□ 3.7
PAPD7-201ENST00000230859 UBTFP17480 764 aaKnown RBP37.92■■■■□ 3.66
PAPD7-201ENST00000230859 NEFLP07196 543 aa37.68■■■■□ 3.62
PAPD7-201ENST00000230859 MYT1LQ9UL68 1186 aa37.07■■■■□ 3.53
PAPD7-201ENST00000230859 YTHDC1Q96MU7 727 aaKnown RBP37.06■■■■□ 3.52
PAPD7-201ENST00000230859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.96■■■■□ 3.51
PAPD7-201ENST00000230859 HNRNPUL2Q1KMD3 747 aaKnown RBP36.96■■■■□ 3.51
PAPD7-201ENST00000230859 DAXXQ9UER7 740 aaPredicted RBP36.78■■■■□ 3.48
PAPD7-201ENST00000230859 MYT1Q01538 1121 aa36.76■■■■□ 3.47
PAPD7-201ENST00000230859 PPARGC1BQ86YN6 1023 aaKnown RBP36.75■■■■□ 3.47
PAPD7-201ENST00000230859 TRIM26Q12899 539 aaPredicted RBP36.73■■■■□ 3.47
PAPD7-201ENST00000230859 POLR3GLQ9BT43 218 aa36.68■■■■□ 3.46
PAPD7-201ENST00000230859 ITGAEP38570 1179 aa36.67■■■■□ 3.46
PAPD7-201ENST00000230859 HRCP23327 699 aa36.23■■■■□ 3.39
PAPD7-201ENST00000230859 SLC4A1APQ9BWU0 796 aaKnown RBP36.19■■■■□ 3.38
PAPD7-201ENST00000230859 CHIC1Q5VXU3 224 aa36.13■■■■□ 3.37
PAPD7-201ENST00000230859 CNGB1Q14028 1251 aaPredicted RBP36.11■■■■□ 3.37
PAPD7-201ENST00000230859 LOC105371045A0A1W2PR82 267 aa35.93■■■■□ 3.34
PAPD7-201ENST00000230859 CLSPNQ9HAW4 1339 aa35.91■■■■□ 3.34
PAPD7-201ENST00000230859 ZNF316A6NFI3 1004 aaPredicted RBP35.8■■■■□ 3.32
PAPD7-201ENST00000230859 FAM50AQ14320 339 aaKnown RBP35.77■■■■□ 3.32
PAPD7-201ENST00000230859 TRIM52Q96A61 297 aa35.73■■■■□ 3.31
PAPD7-201ENST00000230859 RTL5Q5HYW3 569 aaPredicted RBP35.69■■■■□ 3.3
PAPD7-201ENST00000230859 DIEXFQ68CQ4 756 aaKnown RBP35.51■■■■□ 3.27
PAPD7-201ENST00000230859 ZBTB47Q9UFB7 747 aaPredicted RBP35.45■■■■□ 3.27
PAPD7-201ENST00000230859 NEUROD1Q13562 356 aa35.37■■■■□ 3.25
PAPD7-201ENST00000230859 PABPN1Q86U42 306 aaKnown RBP eCLIP35.32■■■■□ 3.25
PAPD7-201ENST00000230859 ZNF326Q5BKZ1 582 aaKnown RBP35.27■■■■□ 3.24
PAPD7-201ENST00000230859 ANP32CO43423 234 aa35.25■■■■□ 3.23
PAPD7-201ENST00000230859 FBLN2P98095 1184 aa35.24■■■■□ 3.23
PAPD7-201ENST00000230859 NEFMP07197 916 aa35.18■■■■□ 3.22
PAPD7-201ENST00000230859 ABCC9O60706 1549 aa35.12■■■■□ 3.21
PAPD7-201ENST00000230859 BCANQ96GW7 911 aa35.02■■■■□ 3.2
PAPD7-201ENST00000230859 SLC24A1O60721 1099 aa35.02■■■■□ 3.2
PAPD7-201ENST00000230859 CANXP27824 592 aaKnown RBP35.02■■■■□ 3.2
PAPD7-201ENST00000230859 CDK11AQ9UQ88 783 aaPredicted RBP34.98■■■■□ 3.19
PAPD7-201ENST00000230859 ESF1Q9H501 851 aaKnown RBP34.75■■■■□ 3.15
PAPD7-201ENST00000230859 BCL11AQ9H165 835 aa34.68■■■■□ 3.14
PAPD7-201ENST00000230859 P3H3Q8IVL6 736 aa34.66■■■■□ 3.14
PAPD7-201ENST00000230859 ZNF777Q9ULD5 760 aaPredicted RBP34.66■■■■□ 3.14
PAPD7-201ENST00000230859 CSRNP3Q8WYN3 585 aa34.63■■■■□ 3.13
PAPD7-201ENST00000230859 ARID3CA6NKF2 412 aa34.61■■■■□ 3.13
PAPD7-201ENST00000230859 GTF3C3Q9Y5Q9 886 aa34.58■■■■□ 3.13
PAPD7-201ENST00000230859 STAG3Q9UJ98 1225 aa34.47■■■■□ 3.11
PAPD7-201ENST00000230859 ANP32AP39687 249 aaKnown RBP34.47■■■■□ 3.11
PAPD7-201ENST00000230859 NPM1P06748 294 aaKnown RBP eCLIP34.43■■■■□ 3.1
PAPD7-201ENST00000230859 CHGAP10645 457 aaKnown RBP34.36■■■■□ 3.09
PAPD7-201ENST00000230859 TONSLQ96HA7 1378 aa34.28■■■■□ 3.08
PAPD7-201ENST00000230859 ANP32BQ92688 251 aaKnown RBP34.23■■■■□ 3.07
PAPD7-201ENST00000230859 HSP90AA1P07900 732 aaKnown RBP34.19■■■■□ 3.06
PAPD7-201ENST00000230859 UPF2Q9HAU5 1272 aaKnown RBP34.19■■■■□ 3.06
PAPD7-201ENST00000230859 NPM2Q86SE8 214 aaKnown RBP34.12■■■■□ 3.05
PAPD7-201ENST00000230859 ACIN1Q9UKV3 1341 aaKnown RBP34.08■■■■□ 3.05
PAPD7-201ENST00000230859 PLPPR3Q6T4P5 718 aa34.01■■■■□ 3.03
PAPD7-201ENST00000230859 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.98■■■■□ 3.03
PAPD7-201ENST00000230859 HNRNPUQ00839 825 aaKnown RBP eCLIP33.97■■■■□ 3.03
PAPD7-201ENST00000230859 TSPY4P0CV99 314 aa33.96■■■■□ 3.03
PAPD7-201ENST00000230859 TSPY10P0CW01 314 aa33.96■■■■□ 3.03
PAPD7-201ENST00000230859 TMC1Q8TDI8 760 aa33.9■■■■□ 3.02
PAPD7-201ENST00000230859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.9■■■■□ 3.028e-8■■□□□ 12.9
PAPD7-201ENST00000230859 FAM9BQ8IZU0 186 aa33.89■■■■□ 3.02
PAPD7-201ENST00000230859 FKBP8Q14318 412 aa33.87■■■■□ 3.01
PAPD7-201ENST00000230859 WDR43Q15061 677 aaKnown RBP eCLIP33.85■■■■□ 3.01
PAPD7-201ENST00000230859 DDX10Q13206 875 aaKnown RBP33.81■■■■□ 3
PAPD7-201ENST00000230859 CHIC2Q9UKJ5 165 aa33.79■■■■□ 3
PAPD7-201ENST00000230859 SCRIBQ14160 1630 aa33.76■■■□□ 2.99
PAPD7-201ENST00000230859 SALL2Q9Y467 1007 aaPredicted RBP33.75■■■□□ 2.99
PAPD7-201ENST00000230859 CCDC136Q96JN2 1154 aa33.71■■■□□ 2.99
PAPD7-201ENST00000230859 MTUS2Q5JR59 1369 aa33.68■■■□□ 2.98
PAPD7-201ENST00000230859 CHMP7Q8WUX9 453 aaPredicted RBP33.66■■■□□ 2.98
PAPD7-201ENST00000230859 MYH16Q9H6N6 1097 aa33.65■■■□□ 2.98
PAPD7-201ENST00000230859 KDM2AQ9Y2K7 1162 aa33.63■■■□□ 2.97
PAPD7-201ENST00000230859 SCAF1Q9H7N4 1312 aaKnown RBP33.63■■■□□ 2.97
PAPD7-201ENST00000230859 MRS2Q9HD23 443 aa33.61■■■□□ 2.97
PAPD7-201ENST00000230859 DCAF1Q9Y4B6 1507 aa33.54■■■□□ 2.96
PAPD7-201ENST00000230859 PPP1R15AO75807 674 aaPredicted RBP33.5■■■□□ 2.95
PAPD7-201ENST00000230859 EIF5BO60841 1220 aaKnown RBP33.5■■■□□ 2.95
PAPD7-201ENST00000230859 A0A0G2JS52 829 aa33.48■■■□□ 2.95
PAPD7-201ENST00000230859 CDK11BP21127 795 aaKnown RBP33.46■■■□□ 2.95
PAPD7-201ENST00000230859 EIF4G2P78344 907 aaKnown RBP eCLIP33.43■■■□□ 2.94
PAPD7-201ENST00000230859 C14orf37Q86TY3 774 aa33.37■■■□□ 2.93
PAPD7-201ENST00000230859 PLEKHD1A6NEE1 506 aa33.37■■■□□ 2.93
PAPD7-201ENST00000230859 ZBTB7CA1YPR0 619 aa33.32■■■□□ 2.92
PAPD7-201ENST00000230859 RSF1Q96T23 1441 aaPredicted RBP33.31■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms