RNA–Protein interactions for RNA: ENST00000561950.1

ABCB10P3-201, Transcript of ABCB10 pseudogene 3, humanhuman

BASIC

Gene ABCB10P3, Length 2,166 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB10P3-201ENST00000561950 NISCHQ9Y2I1 1504 aa58.4■■■■■ 6.94
ABCB10P3-201ENST00000561950 CCDC180Q9P1Z9 1646 aa50.9■■■■■ 5.74
ABCB10P3-201ENST00000561950 ZCCHC6Q5VYS8 1495 aaKnown RBP49.03■■■■■ 5.44
ABCB10P3-201ENST00000561950 DCAF8L2P0C7V8 631 aa48.44■■■■■ 5.34
ABCB10P3-201ENST00000561950 ABCC9O60706 1549 aa48.36■■■■■ 5.33
ABCB10P3-201ENST00000561950 DCAF1Q9Y4B6 1507 aa48.2■■■■■ 5.31
ABCB10P3-201ENST00000561950 SHROOM4Q9ULL8 1493 aa47.75■■■■■ 5.23
ABCB10P3-201ENST00000561950 MYO15BQ96JP2 1530 aa47.64■■■■■ 5.22
ABCB10P3-201ENST00000561950 NACADO15069 1562 aa47.45■■■■■ 5.19
ABCB10P3-201ENST00000561950 RB1CC1Q8TDY2 1594 aa47.08■■■■■ 5.13
ABCB10P3-201ENST00000561950 SCRIBQ14160 1630 aa46.93■■■■■ 5.1
ABCB10P3-201ENST00000561950 UNC13AQ9UPW8 1703 aa46.21■■■■■ 4.99
ABCB10P3-201ENST00000561950 SUPT5HO00267 1087 aaKnown RBP45.89■■■■■ 4.94
ABCB10P3-201ENST00000561950 BICRAQ9NZM4 1560 aa45.71■■■■■ 4.91
ABCB10P3-201ENST00000561950 PABPN1Q86U42 306 aaKnown RBP eCLIP45.64■■■■■ 4.9
ABCB10P3-201ENST00000561950 CECR2Q9BXF3 1484 aa45.46■■■■■ 4.87
ABCB10P3-201ENST00000561950 RSF1Q96T23 1441 aaPredicted RBP45.3■■■■■ 4.84
ABCB10P3-201ENST00000561950 MROH2BQ7Z745 1585 aa45.16■■■■■ 4.82
ABCB10P3-201ENST00000561950 BAZ1AQ9NRL2 1556 aaPredicted RBP45.09■■■■■ 4.81
ABCB10P3-201ENST00000561950 SMARCA4P51532 1647 aa44.92■■■■■ 4.78
ABCB10P3-201ENST00000561950 WIZO95785 1651 aa44.82■■■■■ 4.77
ABCB10P3-201ENST00000561950 CHIC1Q5VXU3 224 aa44.56■■■■■ 4.72
ABCB10P3-201ENST00000561950 EIF4G1Q04637 1599 aaKnown RBP44.34■■■■■ 4.69
ABCB10P3-201ENST00000561950 PEG3Q9GZU2 1588 aa44.32■■■■■ 4.69
ABCB10P3-201ENST00000561950 TOP2AP11388 1531 aaKnown RBP44.27■■■■■ 4.68
ABCB10P3-201ENST00000561950 ATAD2BQ9ULI0 1458 aa44.21■■■■■ 4.67
ABCB10P3-201ENST00000561950 SMARCA2P51531 1590 aa44.14■■■■■ 4.66
ABCB10P3-201ENST00000561950 BAZ1BQ9UIG0 1483 aaKnown RBP43.97■■■■■ 4.63
ABCB10P3-201ENST00000561950 CCDC88BA6NC98 1476 aa43.86■■■■■ 4.61
ABCB10P3-201ENST00000561950 NCAPD3P42695 1498 aa43.81■■■■■ 4.6
ABCB10P3-201ENST00000561950 CC2D2AQ9P2K1 1620 aa43.73■■■■■ 4.59
ABCB10P3-201ENST00000561950 HMGXB3Q12766 1538 aa43.73■■■■■ 4.59
ABCB10P3-201ENST00000561950 TRIM41Q8WV44 630 aa43.09■■■■■ 4.49
ABCB10P3-201ENST00000561950 LOC105371045A0A1W2PR82 267 aa43.07■■■■■ 4.49
ABCB10P3-201ENST00000561950 ABCC8Q09428 1581 aa42.98■■■■■ 4.47
ABCB10P3-201ENST00000561950 CFTRP13569 1480 aa42.84■■■■■ 4.45
ABCB10P3-201ENST00000561950 DNAJC5BQ9UF47 199 aa42.78■■■■■ 4.44
ABCB10P3-201ENST00000561950 PCGF6Q9BYE7 350 aa42.72■■■■■ 4.43
ABCB10P3-201ENST00000561950 CADPSQ9ULU8 1353 aa42.71■■■■■ 4.43
ABCB10P3-201ENST00000561950 HRCP23327 699 aa42.65■■■■■ 4.42
ABCB10P3-201ENST00000561950 WRNQ14191 1432 aaPredicted RBP eCLIP42.65■■■■■ 4.42
ABCB10P3-201ENST00000561950 PRDM2Q13029 1718 aa42.59■■■■■ 4.41
ABCB10P3-201ENST00000561950 SYNJ1O43426 1573 aa42.49■■■■■ 4.39
ABCB10P3-201ENST00000561950 NESP48681 1621 aa42.45■■■■■ 4.39
ABCB10P3-201ENST00000561950 FAM9AQ8IZU1 332 aaPredicted RBP42.38■■■■■ 4.38
ABCB10P3-201ENST00000561950 LAMC3Q9Y6N6 1575 aa42.34■■■■■ 4.37
ABCB10P3-201ENST00000561950 TOP2BQ02880 1626 aa42.28■■■■■ 4.36
ABCB10P3-201ENST00000561950 FANCD2Q9BXW9 1451 aa42.26■■■■■ 4.36
ABCB10P3-201ENST00000561950 BIVM-ERCC5R4GMW8 1640 aa42.22■■■■■ 4.35
ABCB10P3-201ENST00000561950 CUX1P39880 1505 aa42.22■■■■■ 4.35
ABCB10P3-201ENST00000561950 TRIM26Q12899 539 aaPredicted RBP42.18■■■■■ 4.34
ABCB10P3-201ENST00000561950 SOGA1O94964 1423 aa42.14■■■■■ 4.34
ABCB10P3-201ENST00000561950 PDS5BQ9NTI5 1447 aa42.03■■■■■ 4.32
ABCB10P3-201ENST00000561950 RUSC2Q8N2Y8 1516 aa42■■■■■ 4.31
ABCB10P3-201ENST00000561950 CEP164Q9UPV0 1460 aa41.99■■■■■ 4.31
ABCB10P3-201ENST00000561950 KIF21AQ7Z4S6 1674 aa41.9■■■■■ 4.3
ABCB10P3-201ENST00000561950 EEA1Q15075 1411 aa41.9■■■■■ 4.3
ABCB10P3-201ENST00000561950 EHMT2Q96KQ7 1210 aa41.87■■■■■ 4.29
ABCB10P3-201ENST00000561950 DNMBPQ6XZF7 1577 aa41.83■■■■■ 4.29
ABCB10P3-201ENST00000561950 TOPBP1Q92547 1522 aa41.79■■■■■ 4.28
ABCB10P3-201ENST00000561950 FGD5Q6ZNL6 1462 aa41.78■■■■■ 4.28
ABCB10P3-201ENST00000561950 CSRNP3Q8WYN3 585 aa41.78■■■■■ 4.28
ABCB10P3-201ENST00000561950 URB2Q14146 1524 aaKnown RBP41.74■■■■■ 4.27
ABCB10P3-201ENST00000561950 POLA1P09884 1462 aaPredicted RBP41.59■■■■■ 4.25
ABCB10P3-201ENST00000561950 PPARGC1BQ86YN6 1023 aaKnown RBP41.59■■■■■ 4.25
ABCB10P3-201ENST00000561950 KIF27Q86VH2 1401 aa41.56■■■■■ 4.24
ABCB10P3-201ENST00000561950 CUX2O14529 1486 aa41.51■■■■■ 4.23
ABCB10P3-201ENST00000561950 RAD54L2Q9Y4B4 1467 aa41.5■■■■■ 4.23
ABCB10P3-201ENST00000561950 MRC2Q9UBG0 1479 aa41.49■■■■■ 4.23
ABCB10P3-201ENST00000561950 ERCC6Q03468 1493 aa41.45■■■■■ 4.23
ABCB10P3-201ENST00000561950 KIF21BO75037 1637 aa41.4■■■■■ 4.22
ABCB10P3-201ENST00000561950 GOLGA3Q08378 1498 aa41.38■■■■■ 4.22
ABCB10P3-201ENST00000561950 ABCA10Q8WWZ4 1543 aa41.37■■■■■ 4.21
ABCB10P3-201ENST00000561950 UBTFP17480 764 aaKnown RBP41.3■■■■■ 4.2
ABCB10P3-201ENST00000561950 WDR62O43379 1518 aa41.28■■■■■ 4.2
ABCB10P3-201ENST00000561950 RAPGEF2Q9Y4G8 1499 aa41.27■■■■■ 4.2
ABCB10P3-201ENST00000561950 PRXQ9BXM0 1461 aa41.25■■■■■ 4.19
ABCB10P3-201ENST00000561950 WDR97A6NE52 1622 aa41.24■■■■■ 4.19
ABCB10P3-201ENST00000561950 TNIKQ9UKE5 1360 aa41.22■■■■■ 4.19
ABCB10P3-201ENST00000561950 IGF1RP08069 1367 aa41.21■■■■■ 4.19
ABCB10P3-201ENST00000561950 ZEB1P37275 1124 aaPredicted RBP41.21■■■■■ 4.19
ABCB10P3-201ENST00000561950 THOC2Q8NI27 1593 aaKnown RBP41.19■■■■■ 4.18
ABCB10P3-201ENST00000561950 TARBP1Q13395 1621 aaKnown RBP41.16■■■■■ 4.18
ABCB10P3-201ENST00000561950 ERICH3Q5RHP9 1530 aa41.13■■■■■ 4.17
ABCB10P3-201ENST00000561950 TDRD9Q8NDG6 1382 aaKnown RBP41.11■■■■■ 4.17
ABCB10P3-201ENST00000561950 CEP162Q5TB80 1403 aa41.05■■■■■ 4.16
ABCB10P3-201ENST00000561950 ABCA5Q8WWZ7 1642 aa41.05■■■■■ 4.16
ABCB10P3-201ENST00000561950 CARMIL1Q5VZK9 1371 aa41.01■■■■■ 4.16
ABCB10P3-201ENST00000561950 GAPVD1Q14C86 1478 aa40.99■■■■■ 4.15
ABCB10P3-201ENST00000561950 IFT140Q96RY7 1462 aa40.96■■■■■ 4.15
ABCB10P3-201ENST00000561950 AQRO60306 1485 aaKnown RBP eCLIP40.86■■■■■ 4.13
ABCB10P3-201ENST00000561950 CUL7Q14999 1698 aa40.86■■■■■ 4.13
ABCB10P3-201ENST00000561950 ZNF608Q9ULD9 1512 aaPredicted RBP40.83■■■■■ 4.13
ABCB10P3-201ENST00000561950 PBRM1Q86U86 1689 aa40.77■■■■■ 4.12
ABCB10P3-201ENST00000561950 RANGAP1P46060 587 aaPredicted RBP40.75■■■■■ 4.11
ABCB10P3-201ENST00000561950 CLIP1P30622 1438 aa40.75■■■■■ 4.11
ABCB10P3-201ENST00000561950 GRIN2BQ13224 1484 aa40.66■■■■■ 4.1
ABCB10P3-201ENST00000561950 EIF4G3O43432 1585 aaKnown RBP40.65■■■■■ 4.1
ABCB10P3-201ENST00000561950 ADAMTS12P58397 1594 aa40.52■■■■■ 4.08
ABCB10P3-201ENST00000561950 FHAD1B1AJZ9 1412 aa40.52■■■■■ 4.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms