RNA–Protein interactions for RNA: ENST00000435265.5

RANBP1-210, Transcript of RAN binding protein 1, humanhuman

TSL 2

Gene RANBP1, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1-210ENST00000435265 DKC1O60832 514 aaKnown RBP eCLIP21.77■■□□□ 1.081e-323■■■■■ 29.5
RANBP1-210ENST00000435265 AATFQ9NY61 560 aaKnown RBP eCLIP23.32■■□□□ 1.321e-45■■■■■ 31.9
RANBP1-210ENST00000435265 DDX3XO00571 662 aaKnown RBP eCLIP20.92■□□□□ 0.942e-41■■■■■ 28.1
RANBP1-210ENST00000435265 YBX3P16989 372 aaKnown RBP eCLIP23.09■■□□□ 1.292e-33■□□□□ 9.3
RANBP1-210ENST00000435265 PABPC4Q13310 644 aaKnown RBP eCLIP22.24■■□□□ 1.154e-31■■■□□ 16.6
RANBP1-210ENST00000435265 RPS3P23396 243 aaKnown RBP eCLIP19.39■□□□□ 0.692e-29■□□□□ 11.1
RANBP1-210ENST00000435265 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.56■■□□□ 1.23e-25■■□□□ 12.8
RANBP1-210ENST00000435265 EIF4G2P78344 907 aaKnown RBP eCLIP27.67■■■□□ 2.022e-20■■■■■ 114.8
RANBP1-210ENST00000435265 SF3B4Q15427 424 aaKnown RBP eCLIP17.26■□□□□ 0.359e-20■■■■■ 51.2
RANBP1-210ENST00000435265 RBM5P52756 815 aaKnown RBP eCLIP23.15■■□□□ 1.31e-19■■■■□ 25.8
RANBP1-210ENST00000435265 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.71■□□□□ 0.752e-17■□□□□ 8.1
RANBP1-210ENST00000435265 EWSR1Q01844 656 aaKnown RBP eCLIP15.63■□□□□ 0.093e-17■■■■■ 69.6
RANBP1-210ENST00000435265 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.32■■□□□ 13e-17■■□□□ 12.3
RANBP1-210ENST00000435265 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.36■□□□□ 0.854e-16■■■■■ 72.4
RANBP1-210ENST00000435265 SF3A3Q12874 501 aaKnown RBP eCLIP19.16■□□□□ 0.662e-14■■■■□ 20.5
RANBP1-210ENST00000435265 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.67■□□□□ 0.427e-12■■□□□ 12.7
RANBP1-210ENST00000435265 GTF2F1P35269 517 aaKnown RBP eCLIP20.69■□□□□ 0.94e-11■■■■■ 88.5
RANBP1-210ENST00000435265 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.57■■■□□ 2.328e-11■■■□□ 18.5
RANBP1-210ENST00000435265 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.68■□□□□ 0.428e-11■■■■■ 103.1
RANBP1-210ENST00000435265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.38■■□□□ 1.659e-11■□□□□ 10.7
RANBP1-210ENST00000435265 FUSP35637 526 aaKnown RBP eCLIP12.55□□□□□ -0.49e-11■■■■■ 44.3
RANBP1-210ENST00000435265 LARP4Q71RC2 724 aaKnown RBP eCLIP18.89■□□□□ 0.611e-10■□□□□ 11.2
RANBP1-210ENST00000435265 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.48■□□□□ 0.711e-10■■■■■ 35.3
RANBP1-210ENST00000435265 XRCC6P12956 609 aaKnown RBP eCLIP21.99■■□□□ 1.111e-10■□□□□ 8.7
RANBP1-210ENST00000435265 PUM1Q14671 1186 aaKnown RBP eCLIP18.09■□□□□ 0.491e-10■□□□□ 10.7
RANBP1-210ENST00000435265 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.48■□□□□ 0.872e-10■■■■■ 75.6
RANBP1-210ENST00000435265 SMNDC1O75940 238 aaKnown RBP eCLIP17.82■□□□□ 0.442e-10■■■■□ 25
RANBP1-210ENST00000435265 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.65■□□□□ 0.93e-10■■■□□ 15.6
RANBP1-210ENST00000435265 EFTUD2Q15029 972 aaKnown RBP eCLIP19.73■□□□□ 0.751e-9■■■■■ 43.3
RANBP1-210ENST00000435265 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.64■■■□□ 2.331e-9■■■■□ 20.2
RANBP1-210ENST00000435265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.55■■■□□ 2.163e-9■■■□□ 18.7
RANBP1-210ENST00000435265 RBM22Q9NW64 420 aaKnown RBP eCLIP19.96■□□□□ 0.793e-9■■■■■ 26.8
RANBP1-210ENST00000435265 AQRO60306 1485 aaKnown RBP eCLIP31.65■■■□□ 2.665e-9■■■■□ 20.9
RANBP1-210ENST00000435265 TIA1P31483 386 aaKnown RBP eCLIP18.69■□□□□ 0.586e-9■■■■■ 42.4
RANBP1-210ENST00000435265 SAFB2Q14151 953 aaKnown RBP eCLIP27.06■■□□□ 1.926e-9■■■■□ 19.7
RANBP1-210ENST00000435265 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.53■□□□□ 0.246e-9■□□□□ 11.2
RANBP1-210ENST00000435265 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.07■□□□□ 0.649e-9■■■■■ 29.2
RANBP1-210ENST00000435265 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.35■■□□□ 1.019e-9■■■■■ 32.4
RANBP1-210ENST00000435265 RBFOX2O43251 390 aaKnown RBP eCLIP15.88■□□□□ 0.131e-8■■■■□ 26.1
RANBP1-210ENST00000435265 EIF3DO15371 548 aaKnown RBP eCLIP21.59■■□□□ 1.051e-8■□□□□ 10.3
RANBP1-210ENST00000435265 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.62■□□□□ 0.572e-8■□□□□ 10
RANBP1-210ENST00000435265 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.81■□□□□ 0.922e-8■■■□□ 15.6
RANBP1-210ENST00000435265 NOLC1Q14978 699 aaKnown RBP eCLIP21.28■■□□□ 12e-8■■□□□ 11.9
RANBP1-210ENST00000435265 AGGF1Q8N302 714 aaeCLIP19.85■□□□□ 0.772e-8■■□□□ 12.2
RANBP1-210ENST00000435265 FTOQ9C0B1 505 aaKnown RBP eCLIP22.47■■□□□ 1.192e-8■■■■□ 25.3
RANBP1-210ENST00000435265 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.82■□□□□ 0.124e-8■■■■□ 25.2
RANBP1-210ENST00000435265 KHSRPQ92945 711 aaKnown RBP eCLIP20.53■□□□□ 0.884e-8■■□□□ 14.2
RANBP1-210ENST00000435265 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.46■□□□□ 0.876e-8■■■□□ 18.2
RANBP1-210ENST00000435265 EIF3GO75821 320 aaKnown RBP eCLIP15.18■□□□□ 0.026e-8■■■■□ 20.9
RANBP1-210ENST00000435265 HNRNPUQ00839 825 aaKnown RBP eCLIP26.2■■□□□ 1.788e-8■□□□□ 8.1
RANBP1-210ENST00000435265 NONOQ15233 471 aaKnown RBP eCLIP22.34■■□□□ 1.171e-7■■■■□ 19.3
RANBP1-210ENST00000435265 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.68■□□□□ 0.741e-7■■■■■ 34.3
RANBP1-210ENST00000435265 RBM15Q96T37 977 aaKnown RBP eCLIP19.95■□□□□ 0.781e-7■□□□□ 8.3
RANBP1-210ENST00000435265 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.09■□□□□ 0.811e-7■■■□□ 14.9
RANBP1-210ENST00000435265 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.05■■□□□ 1.122e-7■■■■□ 23.8
RANBP1-210ENST00000435265 TAF15Q92804 592 aaKnown RBP eCLIP15.41■□□□□ 0.062e-7■■■■□ 21.3
RANBP1-210ENST00000435265 CPSF6Q16630 551 aaKnown RBP eCLIP18.92■□□□□ 0.623e-7■□□□□ 11.2
RANBP1-210ENST00000435265 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.54■□□□□ 0.43e-7■■■□□ 17.6
RANBP1-210ENST00000435265 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.06■■□□□ 1.283e-7■■■□□ 16.2
RANBP1-210ENST00000435265 HNRNPMP52272 730 aaKnown RBP eCLIP29.21■■■□□ 2.273e-7■■■□□ 14.9
RANBP1-210ENST00000435265 ZRANB2O95218 330 aaKnown RBP eCLIP20.43■□□□□ 0.864e-7■■■■□ 23.4
RANBP1-210ENST00000435265 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.77■□□□□ 0.924e-7■□□□□ 10.5
RANBP1-210ENST00000435265 PRPF4O43172 522 aaKnown RBP eCLIP19.49■□□□□ 0.715e-7■■■■□ 26.1
RANBP1-210ENST00000435265 AARSP49588 968 aaKnown RBP eCLIP20.81■□□□□ 0.925e-7■■■■□ 24.8
RANBP1-210ENST00000435265 DDX42Q86XP3 938 aaKnown RBP eCLIP20.14■□□□□ 0.816e-7■■■□□ 19.2
RANBP1-210ENST00000435265 PCBP2Q15366 365 aaKnown RBP eCLIP19.09■□□□□ 0.657e-7■■■■■ 36.9
RANBP1-210ENST00000435265 DDX6P26196 483 aaKnown RBP eCLIP20.13■□□□□ 0.818e-7■■□□□ 13.3
RANBP1-210ENST00000435265 TARDBPQ13148 414 aaKnown RBP eCLIP18.18■□□□□ 0.58e-7■■■■■ 40
RANBP1-210ENST00000435265 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.82■□□□□ 0.769e-7■■□□□ 12
RANBP1-210ENST00000435265 LSM11P83369 360 aaKnown RBP eCLIP17.87■□□□□ 0.459e-7■■■□□ 19.1
RANBP1-210ENST00000435265 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.98■□□□□ 0.959e-7■□□□□ 9.7
RANBP1-210ENST00000435265 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.78■□□□□ 0.69e-7■■■■■ 61.4
RANBP1-210ENST00000435265 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.28■□□□□ 0.841e-6■□□□□ 11.1
RANBP1-210ENST00000435265 WRNQ14191 1432 aaPredicted RBP eCLIP32.83■■■□□ 2.851e-6■■■■□ 22.5
RANBP1-210ENST00000435265 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.83■■□□□ 1.241e-6■□□□□ 10.8
RANBP1-210ENST00000435265 TIAL1Q01085 375 aaKnown RBP eCLIP19.38■□□□□ 0.691e-6■■■■□ 25.4
RANBP1-210ENST00000435265 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.33■□□□□ 0.851e-6■□□□□ 10.7
RANBP1-210ENST00000435265 NCBP2P52298 156 aaKnown RBP eCLIP18.44■□□□□ 0.542e-6■■■■□ 22.6
RANBP1-210ENST00000435265 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.12■□□□□ 0.972e-6■■■■■ 55.9
RANBP1-210ENST00000435265 AKAP1Q92667 903 aaKnown RBP eCLIP16.93■□□□□ 0.32e-6■■■■■ 27.8
RANBP1-210ENST00000435265 CDC40O60508 579 aaKnown RBP eCLIP17.8■□□□□ 0.442e-6■■■■□ 23.1
RANBP1-210ENST00000435265 SRSF7Q16629 238 aaKnown RBP eCLIP16.34■□□□□ 0.212e-6■■□□□ 11.9
RANBP1-210ENST00000435265 SF3B1O75533 1304 aaKnown RBP eCLIP20.69■□□□□ 0.92e-6■■■■■ 30.9
RANBP1-210ENST00000435265 TROVE2P10155 538 aaKnown RBP eCLIP19.14■□□□□ 0.652e-6■■□□□ 12
RANBP1-210ENST00000435265 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.39■□□□□ 0.863e-6■■■□□ 18.8
RANBP1-210ENST00000435265 ZC3H11AO75152 810 aaKnown RBP eCLIP21.1■□□□□ 0.973e-6■□□□□ 9.8
RANBP1-210ENST00000435265 DDX21Q9NR30 783 aaKnown RBP eCLIP24.82■■□□□ 1.563e-6■■■■■ 34.3
RANBP1-210ENST00000435265 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.44■■□□□ 1.983e-6■■□□□ 12
RANBP1-210ENST00000435265 GPKOWQ92917 476 aaPredicted RBP eCLIP22.56■■□□□ 1.24e-6■□□□□ 11
RANBP1-210ENST00000435265 G3BP1Q13283 466 aaKnown RBP eCLIP24.17■■□□□ 1.468e-6■■□□□ 11.5
Retrieved 90 of 90 RNA–protein pairs in 21.8 ms