RNA–Protein interactions for RNA: ENST00000331821.7

RANBP1-201, Transcript of RAN binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RANBP1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1-201ENST00000331821 DKC1O60832 514 aaKnown RBP eCLIP15.94■□□□□ 0.141e-323■■■■■ 29.5
RANBP1-201ENST00000331821 AATFQ9NY61 560 aaKnown RBP eCLIP17.1■□□□□ 0.331e-45■■■■■ 31.9
RANBP1-201ENST00000331821 DDX3XO00571 662 aaKnown RBP eCLIP15.18■□□□□ 0.022e-41■■■■■ 28.1
RANBP1-201ENST00000331821 YBX3P16989 372 aaKnown RBP eCLIP20.32■□□□□ 0.842e-33■□□□□ 9.3
RANBP1-201ENST00000331821 PABPC4Q13310 644 aaKnown RBP eCLIP17.37■□□□□ 0.374e-31■■■□□ 16.6
RANBP1-201ENST00000331821 RPS3P23396 243 aaKnown RBP eCLIP14.15□□□□□ -0.142e-29■□□□□ 11.1
RANBP1-201ENST00000331821 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.89■□□□□ 0.453e-25■■□□□ 12.8
RANBP1-201ENST00000331821 EIF4G2P78344 907 aaKnown RBP eCLIP20.15■□□□□ 0.822e-20■■■■■ 114.8
RANBP1-201ENST00000331821 SF3B4Q15427 424 aaKnown RBP eCLIP12.69□□□□□ -0.389e-20■■■■■ 51.2
RANBP1-201ENST00000331821 RBM5P52756 815 aaKnown RBP eCLIP17.85■□□□□ 0.451e-19■■■■□ 25.8
RANBP1-201ENST00000331821 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.3□□□□□ -0.122e-17■□□□□ 8.1
RANBP1-201ENST00000331821 EWSR1Q01844 656 aaKnown RBP eCLIP11.27□□□□□ -0.613e-17■■■■■ 69.6
RANBP1-201ENST00000331821 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.47■□□□□ 0.073e-17■■□□□ 12.3
RANBP1-201ENST00000331821 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.7■□□□□ 0.14e-16■■■■■ 72.4
RANBP1-201ENST00000331821 SF3A3Q12874 501 aaKnown RBP eCLIP13.67□□□□□ -0.222e-14■■■■□ 20.5
RANBP1-201ENST00000331821 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.37□□□□□ -0.277e-12■■□□□ 12.7
RANBP1-201ENST00000331821 GTF2F1P35269 517 aaKnown RBP eCLIP16.4■□□□□ 0.224e-11■■■■■ 88.5
RANBP1-201ENST00000331821 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24■■□□□ 1.438e-11■■■□□ 18.5
RANBP1-201ENST00000331821 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.27□□□□□ -0.298e-11■■■■■ 103.1
RANBP1-201ENST00000331821 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.5■□□□□ 0.719e-11■□□□□ 10.7
RANBP1-201ENST00000331821 FUSP35637 526 aaKnown RBP eCLIP9.68□□□□□ -0.869e-11■■■■■ 44.3
RANBP1-201ENST00000331821 LARP4Q71RC2 724 aaKnown RBP eCLIP13.72□□□□□ -0.211e-10■□□□□ 11.2
RANBP1-201ENST00000331821 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.18□□□□□ -0.141e-10■■■■■ 35.3
RANBP1-201ENST00000331821 XRCC6P12956 609 aaKnown RBP eCLIP15.96■□□□□ 0.151e-10■□□□□ 8.7
RANBP1-201ENST00000331821 PUM1Q14671 1186 aaKnown RBP eCLIP16.07■□□□□ 0.161e-10■□□□□ 10.7
RANBP1-201ENST00000331821 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.92□□□□□ -0.022e-10■■■■■ 75.6
RANBP1-201ENST00000331821 SMNDC1O75940 238 aaKnown RBP eCLIP12.65□□□□□ -0.382e-10■■■■□ 25
RANBP1-201ENST00000331821 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.11■□□□□ 0.333e-10■■■□□ 15.6
RANBP1-201ENST00000331821 EFTUD2Q15029 972 aaKnown RBP eCLIP14.21□□□□□ -0.131e-9■■■■■ 43.3
RANBP1-201ENST00000331821 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.95■■□□□ 1.261e-9■■■■□ 20.2
RANBP1-201ENST00000331821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.18■■□□□ 1.143e-9■■■□□ 18.7
RANBP1-201ENST00000331821 RBM22Q9NW64 420 aaKnown RBP eCLIP14.51□□□□□ -0.093e-9■■■■■ 26.8
RANBP1-201ENST00000331821 AQRO60306 1485 aaKnown RBP eCLIP26.74■■□□□ 1.875e-9■■■■□ 20.9
RANBP1-201ENST00000331821 TIA1P31483 386 aaKnown RBP eCLIP13.58□□□□□ -0.246e-9■■■■■ 42.4
RANBP1-201ENST00000331821 SAFB2Q14151 953 aaKnown RBP eCLIP20.92■□□□□ 0.946e-9■■■■□ 19.7
RANBP1-201ENST00000331821 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.04□□□□□ -0.486e-9■□□□□ 11.2
RANBP1-201ENST00000331821 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.72■□□□□ 0.439e-9■■■■■ 29.2
RANBP1-201ENST00000331821 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.65■□□□□ 0.429e-9■■■■■ 32.4
RANBP1-201ENST00000331821 RBFOX2O43251 390 aaKnown RBP eCLIP11.58□□□□□ -0.561e-8■■■■□ 26.1
RANBP1-201ENST00000331821 EIF3DO15371 548 aaKnown RBP eCLIP15.75■□□□□ 0.111e-8■□□□□ 10.3
RANBP1-201ENST00000331821 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.58□□□□□ -0.242e-8■□□□□ 10
RANBP1-201ENST00000331821 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.49■□□□□ 0.232e-8■■■□□ 15.6
RANBP1-201ENST00000331821 NOLC1Q14978 699 aaKnown RBP eCLIP15.51■□□□□ 0.072e-8■■□□□ 11.9
RANBP1-201ENST00000331821 AGGF1Q8N302 714 aaeCLIP14.38□□□□□ -0.112e-8■■□□□ 12.2
RANBP1-201ENST00000331821 FTOQ9C0B1 505 aaKnown RBP eCLIP16.63■□□□□ 0.252e-8■■■■□ 25.3
RANBP1-201ENST00000331821 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.72□□□□□ -0.374e-8■■■■□ 25.2
RANBP1-201ENST00000331821 KHSRPQ92945 711 aaKnown RBP eCLIP16.98■□□□□ 0.314e-8■■□□□ 14.2
RANBP1-201ENST00000331821 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.58■□□□□ 0.086e-8■■■□□ 18.2
RANBP1-201ENST00000331821 EIF3GO75821 320 aaKnown RBP eCLIP10.85□□□□□ -0.676e-8■■■■□ 20.9
RANBP1-201ENST00000331821 HNRNPUQ00839 825 aaKnown RBP eCLIP18.92■□□□□ 0.628e-8■□□□□ 8.1
RANBP1-201ENST00000331821 NONOQ15233 471 aaKnown RBP eCLIP16.27■□□□□ 0.21e-7■■■■□ 19.3
RANBP1-201ENST00000331821 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.3□□□□□ -0.121e-7■■■■■ 34.3
RANBP1-201ENST00000331821 RBM15Q96T37 977 aaKnown RBP eCLIP14.44□□□□□ -0.11e-7■□□□□ 8.3
RANBP1-201ENST00000331821 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.61□□□□□ -0.071e-7■■■□□ 14.9
RANBP1-201ENST00000331821 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.78■□□□□ 0.282e-7■■■■□ 23.8
RANBP1-201ENST00000331821 TAF15Q92804 592 aaKnown RBP eCLIP11.93□□□□□ -0.52e-7■■■■□ 21.3
RANBP1-201ENST00000331821 CPSF6Q16630 551 aaKnown RBP eCLIP13.71□□□□□ -0.213e-7■□□□□ 11.2
RANBP1-201ENST00000331821 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.72□□□□□ -0.373e-7■■■□□ 17.6
RANBP1-201ENST00000331821 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.85■□□□□ 0.293e-7■■■□□ 16.2
RANBP1-201ENST00000331821 HNRNPMP52272 730 aaKnown RBP eCLIP23.07■■□□□ 1.283e-7■■■□□ 14.9
RANBP1-201ENST00000331821 ZRANB2O95218 330 aaKnown RBP eCLIP14.84□□□□□ -0.034e-7■■■■□ 23.4
RANBP1-201ENST00000331821 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.13■□□□□ 0.014e-7■□□□□ 10.5
RANBP1-201ENST00000331821 PRPF4O43172 522 aaKnown RBP eCLIP14.13□□□□□ -0.155e-7■■■■□ 26.1
RANBP1-201ENST00000331821 AARSP49588 968 aaKnown RBP eCLIP15.24■□□□□ 0.035e-7■■■■□ 24.8
RANBP1-201ENST00000331821 DDX42Q86XP3 938 aaKnown RBP eCLIP14.77□□□□□ -0.056e-7■■■□□ 19.2
RANBP1-201ENST00000331821 PCBP2Q15366 365 aaKnown RBP eCLIP13.91□□□□□ -0.187e-7■■■■■ 36.9
RANBP1-201ENST00000331821 DDX6P26196 483 aaKnown RBP eCLIP15.04■□□□□ -08e-7■■□□□ 13.3
RANBP1-201ENST00000331821 TARDBPQ13148 414 aaKnown RBP eCLIP14.72□□□□□ -0.058e-7■■■■■ 40
RANBP1-201ENST00000331821 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.55□□□□□ -0.089e-7■■□□□ 12
RANBP1-201ENST00000331821 LSM11P83369 360 aaKnown RBP eCLIP12.9□□□□□ -0.349e-7■■■□□ 19.1
RANBP1-201ENST00000331821 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.16■□□□□ 0.029e-7■□□□□ 9.7
RANBP1-201ENST00000331821 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.63□□□□□ -0.239e-7■■■■■ 61.4
RANBP1-201ENST00000331821 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.81□□□□□ -0.041e-6■□□□□ 11.1
RANBP1-201ENST00000331821 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.691e-6■■■■□ 22.5
RANBP1-201ENST00000331821 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.33■□□□□ 0.361e-6■□□□□ 10.8
RANBP1-201ENST00000331821 TIAL1Q01085 375 aaKnown RBP eCLIP14.09□□□□□ -0.151e-6■■■■□ 25.4
RANBP1-201ENST00000331821 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.85□□□□□ -0.031e-6■□□□□ 10.7
RANBP1-201ENST00000331821 NCBP2P52298 156 aaKnown RBP eCLIP13.37□□□□□ -0.272e-6■■■■□ 22.6
RANBP1-201ENST00000331821 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.23■□□□□ 0.032e-6■■■■■ 55.9
RANBP1-201ENST00000331821 AKAP1Q92667 903 aaKnown RBP eCLIP12.51□□□□□ -0.412e-6■■■■■ 27.8
RANBP1-201ENST00000331821 CDC40O60508 579 aaKnown RBP eCLIP13.02□□□□□ -0.332e-6■■■■□ 23.1
RANBP1-201ENST00000331821 SRSF7Q16629 238 aaKnown RBP eCLIP11.94□□□□□ -0.52e-6■■□□□ 11.9
RANBP1-201ENST00000331821 SF3B1O75533 1304 aaKnown RBP eCLIP15.46■□□□□ 0.072e-6■■■■■ 30.9
RANBP1-201ENST00000331821 TROVE2P10155 538 aaKnown RBP eCLIP13.82□□□□□ -0.22e-6■■□□□ 12
RANBP1-201ENST00000331821 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.78□□□□□ -0.043e-6■■■□□ 18.8
RANBP1-201ENST00000331821 ZC3H11AO75152 810 aaKnown RBP eCLIP15.79■□□□□ 0.123e-6■□□□□ 9.8
RANBP1-201ENST00000331821 DDX21Q9NR30 783 aaKnown RBP eCLIP19.02■□□□□ 0.643e-6■■■■■ 34.3
RANBP1-201ENST00000331821 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.91■■□□□ 1.13e-6■■□□□ 12
RANBP1-201ENST00000331821 GPKOWQ92917 476 aaPredicted RBP eCLIP16.37■□□□□ 0.214e-6■□□□□ 11
RANBP1-201ENST00000331821 G3BP1Q13283 466 aaKnown RBP eCLIP17.62■□□□□ 0.418e-6■■□□□ 11.5
Retrieved 90 of 90 RNA–protein pairs in 120.4 ms