Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.87■■■□□ 2.05
TTC4O95801 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
TTC4O95801 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
TTC4O95801 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.84■■■□□ 2.05
TTC4O95801 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TTC4O95801 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
TTC4O95801 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
TTC4O95801 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
TTC4O95801 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
TTC4O95801 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
TTC4O95801 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.79■■■□□ 2.04
TTC4O95801 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
TTC4O95801 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
TTC4O95801 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
TTC4O95801 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TTC4O95801 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TTC4O95801 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TTC4O95801 DYNLL1-208ENST00000550178 581 ntBASIC27.73■■■□□ 2.03
TTC4O95801 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TTC4O95801 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
TTC4O95801 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.72■■■□□ 2.03
TTC4O95801 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TTC4O95801 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.71■■■□□ 2.03
TTC4O95801 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
TTC4O95801 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
TTC4O95801 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.69■■■□□ 2.02
TTC4O95801 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
TTC4O95801 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
TTC4O95801 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.68■■■□□ 2.02
TTC4O95801 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
TTC4O95801 AC139426.1-201ENST00000568218 2529 ntBASIC27.65■■■□□ 2.02
TTC4O95801 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TTC4O95801 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TTC4O95801 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
TTC4O95801 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
TTC4O95801 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TTC4O95801 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
TTC4O95801 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
TTC4O95801 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.59■■■□□ 2.01
TTC4O95801 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TTC4O95801 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TTC4O95801 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.58■■■□□ 2.01
TTC4O95801 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.58■■■□□ 2.01
TTC4O95801 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
TTC4O95801 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TTC4O95801 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
TTC4O95801 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.56■■■□□ 2
TTC4O95801 AL031258.1-201ENST00000623562 325 ntBASIC27.56■■■□□ 2
TTC4O95801 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TTC4O95801 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TTC4O95801 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.53■■■□□ 2
TTC4O95801 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.53■■■□□ 2
TTC4O95801 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.53■■■□□ 2
TTC4O95801 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
TTC4O95801 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
TTC4O95801 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
TTC4O95801 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.51■■■□□ 2
TTC4O95801 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TTC4O95801 AP002365.1-201ENST00000603448 772 ntBASIC27.51■■□□□ 1.99
TTC4O95801 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.5■■□□□ 1.99
TTC4O95801 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TTC4O95801 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
TTC4O95801 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
TTC4O95801 ST7-AS1-201ENST00000456775 1889 ntBASIC27.49■■□□□ 1.99
TTC4O95801 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.48■■□□□ 1.99
TTC4O95801 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TTC4O95801 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.47■■□□□ 1.99
TTC4O95801 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.47■■□□□ 1.99
TTC4O95801 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TTC4O95801 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
TTC4O95801 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.46■■□□□ 1.99
TTC4O95801 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
TTC4O95801 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
TTC4O95801 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
TTC4O95801 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
TTC4O95801 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.43■■□□□ 1.98
TTC4O95801 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TTC4O95801 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
TTC4O95801 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TTC4O95801 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
TTC4O95801 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TTC4O95801 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TTC4O95801 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.39■■□□□ 1.98
TTC4O95801 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
TTC4O95801 AL161658.1-201ENST00000623641 1967 ntBASIC27.38■■□□□ 1.97
TTC4O95801 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TTC4O95801 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TTC4O95801 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TTC4O95801 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TTC4O95801 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
TTC4O95801 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
TTC4O95801 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
TTC4O95801 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TTC4O95801 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.33■■□□□ 1.97
TTC4O95801 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TTC4O95801 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TTC4O95801 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.3■■□□□ 1.96
TTC4O95801 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TTC4O95801 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.29■■□□□ 1.96
TTC4O95801 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms