Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
LRTM1Q9HBL6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
LRTM1Q9HBL6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
LRTM1Q9HBL6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LRTM1Q9HBL6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
LRTM1Q9HBL6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LRTM1Q9HBL6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
LRTM1Q9HBL6 WASH5P-204ENST00000632292 975 ntBASIC25.62■■□□□ 1.69
LRTM1Q9HBL6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.61■■□□□ 1.69
LRTM1Q9HBL6 AL133380.1-201ENST00000506013 324 ntBASIC25.6■■□□□ 1.69
LRTM1Q9HBL6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
LRTM1Q9HBL6 AL135925.1-201ENST00000605920 1701 ntBASIC25.6■■□□□ 1.69
LRTM1Q9HBL6 AC139426.1-201ENST00000568218 2529 ntBASIC25.59■■□□□ 1.69
LRTM1Q9HBL6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LRTM1Q9HBL6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LRTM1Q9HBL6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
LRTM1Q9HBL6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LRTM1Q9HBL6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LRTM1Q9HBL6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
LRTM1Q9HBL6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
LRTM1Q9HBL6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.54■■□□□ 1.68
LRTM1Q9HBL6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
LRTM1Q9HBL6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.52■■□□□ 1.68
LRTM1Q9HBL6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
LRTM1Q9HBL6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.51■■□□□ 1.67
LRTM1Q9HBL6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
LRTM1Q9HBL6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.51■■□□□ 1.67
LRTM1Q9HBL6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
LRTM1Q9HBL6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
LRTM1Q9HBL6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
LRTM1Q9HBL6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.5■■□□□ 1.67
LRTM1Q9HBL6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
LRTM1Q9HBL6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
LRTM1Q9HBL6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.49■■□□□ 1.67
LRTM1Q9HBL6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
LRTM1Q9HBL6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
LRTM1Q9HBL6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
LRTM1Q9HBL6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
LRTM1Q9HBL6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
LRTM1Q9HBL6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
LRTM1Q9HBL6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
LRTM1Q9HBL6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
LRTM1Q9HBL6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
LRTM1Q9HBL6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.44■■□□□ 1.66
LRTM1Q9HBL6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
LRTM1Q9HBL6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
LRTM1Q9HBL6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LRTM1Q9HBL6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LRTM1Q9HBL6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.42■■□□□ 1.66
LRTM1Q9HBL6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.42■■□□□ 1.66
LRTM1Q9HBL6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.42■■□□□ 1.66
LRTM1Q9HBL6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
LRTM1Q9HBL6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
LRTM1Q9HBL6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
LRTM1Q9HBL6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
LRTM1Q9HBL6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
LRTM1Q9HBL6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
LRTM1Q9HBL6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.4■■□□□ 1.66
LRTM1Q9HBL6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
LRTM1Q9HBL6 RARRES2P7-201ENST00000567349 469 ntBASIC25.39■■□□□ 1.66
LRTM1Q9HBL6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LRTM1Q9HBL6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
LRTM1Q9HBL6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LRTM1Q9HBL6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.36■■□□□ 1.65
LRTM1Q9HBL6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRTM1Q9HBL6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRTM1Q9HBL6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
LRTM1Q9HBL6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LRTM1Q9HBL6 SETD8P1-201ENST00000623146 1180 ntBASIC25.33■■□□□ 1.65
LRTM1Q9HBL6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.33■■□□□ 1.64
LRTM1Q9HBL6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LRTM1Q9HBL6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LRTM1Q9HBL6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LRTM1Q9HBL6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LRTM1Q9HBL6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LRTM1Q9HBL6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LRTM1Q9HBL6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRTM1Q9HBL6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRTM1Q9HBL6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LRTM1Q9HBL6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRTM1Q9HBL6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LRTM1Q9HBL6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
LRTM1Q9HBL6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LRTM1Q9HBL6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LRTM1Q9HBL6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LRTM1Q9HBL6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.27■■□□□ 1.64
LRTM1Q9HBL6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LRTM1Q9HBL6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
LRTM1Q9HBL6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.25■■□□□ 1.63
LRTM1Q9HBL6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LRTM1Q9HBL6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
LRTM1Q9HBL6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.22■■□□□ 1.63
LRTM1Q9HBL6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
LRTM1Q9HBL6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
LRTM1Q9HBL6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LRTM1Q9HBL6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LRTM1Q9HBL6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.22■■□□□ 1.63
LRTM1Q9HBL6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LRTM1Q9HBL6 AC010864.1-201ENST00000609407 1511 ntBASIC25.22■■□□□ 1.63
LRTM1Q9HBL6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms