RNA–Protein interactions for RNA: ENST00000254908.10

PCBD2-201, Transcript of pterin-4 alpha-carbinolamine dehydratase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBD2, Length 1,223 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBD2-201ENST00000254908 NISCHQ9Y2I1 1504 aa66.86■■■■■ 8.29
PCBD2-201ENST00000254908 CCDC180Q9P1Z9 1646 aa59.58■■■■■ 7.13
PCBD2-201ENST00000254908 ABCC9O60706 1549 aa58.47■■■■■ 6.95
PCBD2-201ENST00000254908 RB1CC1Q8TDY2 1594 aa56.19■■■■■ 6.59
PCBD2-201ENST00000254908 NACADO15069 1562 aa56.08■■■■■ 6.57
PCBD2-201ENST00000254908 DCAF8L2P0C7V8 631 aa55.96■■■■■ 6.55
PCBD2-201ENST00000254908 MYO15BQ96JP2 1530 aa55.67■■■■■ 6.5
PCBD2-201ENST00000254908 ZCCHC6Q5VYS8 1495 aaKnown RBP55.63■■■■■ 6.5
PCBD2-201ENST00000254908 DCAF1Q9Y4B6 1507 aa55.33■■■■■ 6.45
PCBD2-201ENST00000254908 UNC13AQ9UPW8 1703 aa54.88■■■■■ 6.38
PCBD2-201ENST00000254908 PABPN1Q86U42 306 aaKnown RBP eCLIP54.59■■■■■ 6.33
PCBD2-201ENST00000254908 BICRAQ9NZM4 1560 aa54.46■■■■■ 6.31
PCBD2-201ENST00000254908 SCRIBQ14160 1630 aa54.3■■■■■ 6.28
PCBD2-201ENST00000254908 SHROOM4Q9ULL8 1493 aa53.92■■■■■ 6.22
PCBD2-201ENST00000254908 DNAJC5BQ9UF47 199 aa53.86■■■■■ 6.21
PCBD2-201ENST00000254908 EIF4G1Q04637 1599 aaKnown RBP53.05■■■■■ 6.08
PCBD2-201ENST00000254908 CC2D2AQ9P2K1 1620 aa52.89■■■■■ 6.06
PCBD2-201ENST00000254908 CECR2Q9BXF3 1484 aa52.58■■■■■ 6.01
PCBD2-201ENST00000254908 SMARCA4P51532 1647 aa51.93■■■■■ 5.9
PCBD2-201ENST00000254908 BAZ1AQ9NRL2 1556 aaPredicted RBP51.86■■■■■ 5.89
PCBD2-201ENST00000254908 NCAPD3P42695 1498 aa51.73■■■■■ 5.87
PCBD2-201ENST00000254908 ATAD2BQ9ULI0 1458 aa51.71■■■■■ 5.87
PCBD2-201ENST00000254908 SMARCA2P51531 1590 aa51.66■■■■■ 5.86
PCBD2-201ENST00000254908 MROH2BQ7Z745 1585 aa51.51■■■■■ 5.84
PCBD2-201ENST00000254908 HMGXB3Q12766 1538 aa51.46■■■■■ 5.83
PCBD2-201ENST00000254908 PEG3Q9GZU2 1588 aa51.44■■■■■ 5.82
PCBD2-201ENST00000254908 BAZ1BQ9UIG0 1483 aaKnown RBP51.29■■■■■ 5.8
PCBD2-201ENST00000254908 WIZO95785 1651 aa50.94■■■■■ 5.75
PCBD2-201ENST00000254908 RSF1Q96T23 1441 aaPredicted RBP50.84■■■■■ 5.73
PCBD2-201ENST00000254908 NESP48681 1621 aa50.51■■■■■ 5.68
PCBD2-201ENST00000254908 ERCC6Q03468 1493 aa50.45■■■■■ 5.67
PCBD2-201ENST00000254908 LAMC3Q9Y6N6 1575 aa50.41■■■■■ 5.66
PCBD2-201ENST00000254908 TOP2AP11388 1531 aaKnown RBP50.41■■■■■ 5.66
PCBD2-201ENST00000254908 CADPSQ9ULU8 1353 aa50.21■■■■■ 5.63
PCBD2-201ENST00000254908 PDS5BQ9NTI5 1447 aa50.09■■■■■ 5.61
PCBD2-201ENST00000254908 CUX2O14529 1486 aa50.01■■■■■ 5.6
PCBD2-201ENST00000254908 KIF21AQ7Z4S6 1674 aa49.93■■■■■ 5.58
PCBD2-201ENST00000254908 CFTRP13569 1480 aa49.86■■■■■ 5.57
PCBD2-201ENST00000254908 THOC2Q8NI27 1593 aaKnown RBP49.82■■■■■ 5.57
PCBD2-201ENST00000254908 CCDC88BA6NC98 1476 aa49.81■■■■■ 5.56
PCBD2-201ENST00000254908 FANCD2Q9BXW9 1451 aa49.63■■■■■ 5.53
PCBD2-201ENST00000254908 CEP164Q9UPV0 1460 aa49.59■■■■■ 5.53
PCBD2-201ENST00000254908 MRC2Q9UBG0 1479 aa49.57■■■■■ 5.53
PCBD2-201ENST00000254908 PRDM2Q13029 1718 aa49.48■■■■■ 5.51
PCBD2-201ENST00000254908 WDR62O43379 1518 aa49.41■■■■■ 5.5
PCBD2-201ENST00000254908 SUPT5HO00267 1087 aaKnown RBP49.38■■■■■ 5.5
PCBD2-201ENST00000254908 URB2Q14146 1524 aaKnown RBP49.13■■■■■ 5.45
PCBD2-201ENST00000254908 ABCC8Q09428 1581 aa48.83■■■■■ 5.41
PCBD2-201ENST00000254908 TOPBP1Q92547 1522 aa48.81■■■■■ 5.4
PCBD2-201ENST00000254908 DNAJC5Q9H3Z4 198 aa48.75■■■■■ 5.39
PCBD2-201ENST00000254908 DNMBPQ6XZF7 1577 aa48.74■■■■■ 5.39
PCBD2-201ENST00000254908 IFT140Q96RY7 1462 aa48.57■■■■■ 5.37
PCBD2-201ENST00000254908 POLA1P09884 1462 aaPredicted RBP48.37■■■■■ 5.33
PCBD2-201ENST00000254908 CUX1P39880 1505 aa48.34■■■■■ 5.33
PCBD2-201ENST00000254908 ZNF608Q9ULD9 1512 aaPredicted RBP48.33■■■■■ 5.33
PCBD2-201ENST00000254908 TARBP1Q13395 1621 aaKnown RBP48.28■■■■■ 5.32
PCBD2-201ENST00000254908 FGD5Q6ZNL6 1462 aa48.23■■■■■ 5.31
PCBD2-201ENST00000254908 SOGA1O94964 1423 aa48.19■■■■■ 5.31
PCBD2-201ENST00000254908 RAD54L2Q9Y4B4 1467 aa48.15■■■■■ 5.3
PCBD2-201ENST00000254908 EIF4G3O43432 1585 aaKnown RBP48.14■■■■■ 5.3
PCBD2-201ENST00000254908 AQRO60306 1485 aaKnown RBP eCLIP48.04■■■■■ 5.28
PCBD2-201ENST00000254908 WRNQ14191 1432 aaPredicted RBP eCLIP47.97■■■■■ 5.276e-9■■■■□ 22.9
PCBD2-201ENST00000254908 WDR97A6NE52 1622 aa47.93■■■■■ 5.26
PCBD2-201ENST00000254908 TDRD9Q8NDG6 1382 aaKnown RBP47.92■■■■■ 5.26
PCBD2-201ENST00000254908 OSCARQ8IYS5 282 aa47.91■■■■■ 5.26
PCBD2-201ENST00000254908 TOP2BQ02880 1626 aa47.88■■■■■ 5.25
PCBD2-201ENST00000254908 BIVM-ERCC5R4GMW8 1640 aa47.88■■■■■ 5.25
PCBD2-201ENST00000254908 SYNJ1O43426 1573 aa47.83■■■■■ 5.25
PCBD2-201ENST00000254908 ABCA10Q8WWZ4 1543 aa47.76■■■■■ 5.24
PCBD2-201ENST00000254908 GRIN2BQ13224 1484 aa47.66■■■■■ 5.22
PCBD2-201ENST00000254908 GAPVD1Q14C86 1478 aa47.63■■■■■ 5.22
PCBD2-201ENST00000254908 SNAPC4Q5SXM2 1469 aa47.59■■■■■ 5.21
PCBD2-201ENST00000254908 CHD1O14646 1710 aa47.59■■■■■ 5.21
PCBD2-201ENST00000254908 ABCA5Q8WWZ7 1642 aa47.57■■■■■ 5.21
PCBD2-201ENST00000254908 MAGI1Q96QZ7 1491 aaPredicted RBP47.57■■■■■ 5.21
PCBD2-201ENST00000254908 FBLN2P98095 1184 aa47.54■■■■■ 5.2
PCBD2-201ENST00000254908 PBRM1Q86U86 1689 aa47.53■■■■■ 5.2
PCBD2-201ENST00000254908 CHMP7Q8WUX9 453 aaPredicted RBP47.39■■■■■ 5.18
PCBD2-201ENST00000254908 SYNJ2O15056 1496 aa47.37■■■■■ 5.17
PCBD2-201ENST00000254908 ERICH3Q5RHP9 1530 aa47.2■■■■■ 5.15
PCBD2-201ENST00000254908 ADAMTS12P58397 1594 aa47.13■■■■■ 5.14
PCBD2-201ENST00000254908 RIMBP3CA6NJZ7 1639 aa47.12■■■■■ 5.13
PCBD2-201ENST00000254908 RIMBP3BA6NNM3 1639 aa47.12■■■■■ 5.13
PCBD2-201ENST00000254908 RIMBP3Q9UFD9 1639 aa47.12■■■■■ 5.13
PCBD2-201ENST00000254908 ARHGEF11O15085 1522 aa47.1■■■■■ 5.13
PCBD2-201ENST00000254908 FHAD1B1AJZ9 1412 aa47.07■■■■■ 5.13
PCBD2-201ENST00000254908 CLASP1Q7Z460 1538 aa47.07■■■■■ 5.13
PCBD2-201ENST00000254908 GRIN2AQ12879 1464 aa47.03■■■■■ 5.12
PCBD2-201ENST00000254908 TRIM41Q8WV44 630 aa47.02■■■■■ 5.12
PCBD2-201ENST00000254908 KIF27Q86VH2 1401 aa47■■■■■ 5.11
PCBD2-201ENST00000254908 NUP160Q12769 1436 aa46.84■■■■■ 5.09
PCBD2-201ENST00000254908 IGF1RP08069 1367 aa46.82■■■■■ 5.09
PCBD2-201ENST00000254908 CEP170Q5SW79 1584 aa46.79■■■■■ 5.08
PCBD2-201ENST00000254908 CUL7Q14999 1698 aa46.72■■■■■ 5.07
PCBD2-201ENST00000254908 ARAP1Q96P48 1450 aa46.7■■■■■ 5.07
PCBD2-201ENST00000254908 CYB5RLQ6IPT4 315 aa46.69■■■■■ 5.06
PCBD2-201ENST00000254908 CARMIL1Q5VZK9 1371 aa46.55■■■■■ 5.04
PCBD2-201ENST00000254908 SHROOM2Q13796 1616 aa46.5■■■■■ 5.04
PCBD2-201ENST00000254908 RUSC2Q8N2Y8 1516 aa46.44■■■■■ 5.02
PCBD2-201ENST00000254908 ERCC6L2Q5T890 1561 aa46.38■■■■■ 5.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms