Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
LRTM1Q9HBL6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.21■■■□□ 2.75
LRTM1Q9HBL6 AL356512.1-201ENST00000607453 1739 ntBASIC31.74■■■□□ 2.67
LRTM1Q9HBL6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.72■■■□□ 2.67
LRTM1Q9HBL6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.64■■■□□ 2.65
LRTM1Q9HBL6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
LRTM1Q9HBL6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.34■■■□□ 2.61
LRTM1Q9HBL6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
LRTM1Q9HBL6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
LRTM1Q9HBL6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
LRTM1Q9HBL6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.01■■■□□ 2.56
LRTM1Q9HBL6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.81■■■□□ 2.52
LRTM1Q9HBL6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
LRTM1Q9HBL6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
LRTM1Q9HBL6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
LRTM1Q9HBL6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.36■■■□□ 2.45
LRTM1Q9HBL6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.35■■■□□ 2.45
LRTM1Q9HBL6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.3■■■□□ 2.44
LRTM1Q9HBL6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.17■■■□□ 2.42
LRTM1Q9HBL6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
LRTM1Q9HBL6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
LRTM1Q9HBL6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
LRTM1Q9HBL6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
LRTM1Q9HBL6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
LRTM1Q9HBL6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
LRTM1Q9HBL6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
LRTM1Q9HBL6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
LRTM1Q9HBL6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.63■■■□□ 2.33
LRTM1Q9HBL6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.58■■■□□ 2.33
LRTM1Q9HBL6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.58■■■□□ 2.33
LRTM1Q9HBL6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
LRTM1Q9HBL6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
LRTM1Q9HBL6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
LRTM1Q9HBL6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.44■■■□□ 2.3
LRTM1Q9HBL6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
LRTM1Q9HBL6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.35■■■□□ 2.29
LRTM1Q9HBL6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
LRTM1Q9HBL6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.32■■■□□ 2.28
LRTM1Q9HBL6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.3■■■□□ 2.28
LRTM1Q9HBL6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
LRTM1Q9HBL6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
LRTM1Q9HBL6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.99■■■□□ 2.23
LRTM1Q9HBL6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
LRTM1Q9HBL6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
LRTM1Q9HBL6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
LRTM1Q9HBL6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.93■■■□□ 2.22
LRTM1Q9HBL6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.93■■■□□ 2.22
LRTM1Q9HBL6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.83■■■□□ 2.21
LRTM1Q9HBL6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
LRTM1Q9HBL6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.76■■■□□ 2.19
LRTM1Q9HBL6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.73■■■□□ 2.19
LRTM1Q9HBL6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
LRTM1Q9HBL6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
LRTM1Q9HBL6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
LRTM1Q9HBL6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.58■■■□□ 2.17
LRTM1Q9HBL6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
LRTM1Q9HBL6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
LRTM1Q9HBL6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
LRTM1Q9HBL6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
LRTM1Q9HBL6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
LRTM1Q9HBL6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
LRTM1Q9HBL6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
LRTM1Q9HBL6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
LRTM1Q9HBL6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
LRTM1Q9HBL6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
LRTM1Q9HBL6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
LRTM1Q9HBL6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
LRTM1Q9HBL6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
LRTM1Q9HBL6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.19■■■□□ 2.1
LRTM1Q9HBL6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
LRTM1Q9HBL6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
LRTM1Q9HBL6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
LRTM1Q9HBL6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
LRTM1Q9HBL6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.1■■■□□ 2.09
LRTM1Q9HBL6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
LRTM1Q9HBL6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.07■■■□□ 2.08
LRTM1Q9HBL6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
LRTM1Q9HBL6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
LRTM1Q9HBL6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
LRTM1Q9HBL6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
LRTM1Q9HBL6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
LRTM1Q9HBL6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
LRTM1Q9HBL6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
LRTM1Q9HBL6 AC145285.7-201ENST00000614819 1539 ntBASIC27.95■■■□□ 2.06
LRTM1Q9HBL6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC27.88■■■□□ 2.05
LRTM1Q9HBL6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
LRTM1Q9HBL6 AC015813.7-201ENST00000623294 581 ntBASIC27.85■■■□□ 2.05
LRTM1Q9HBL6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.83■■■□□ 2.04
LRTM1Q9HBL6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
LRTM1Q9HBL6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
LRTM1Q9HBL6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
LRTM1Q9HBL6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.8■■■□□ 2.04
LRTM1Q9HBL6 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
LRTM1Q9HBL6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
LRTM1Q9HBL6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
LRTM1Q9HBL6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.04
LRTM1Q9HBL6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.76■■■□□ 2.03
LRTM1Q9HBL6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
LRTM1Q9HBL6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
LRTM1Q9HBL6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms