RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 NISCHQ9Y2I1 1504 aa63.72■■■■■ 7.79
CGREF1-204ENST00000402550 CCDC180Q9P1Z9 1646 aa56.29■■■■■ 6.6
CGREF1-204ENST00000402550 ABCC9O60706 1549 aa54.6■■■■■ 6.33
CGREF1-204ENST00000402550 ZCCHC6Q5VYS8 1495 aaKnown RBP53.17■■■■■ 6.1
CGREF1-204ENST00000402550 DCAF8L2P0C7V8 631 aa53.12■■■■■ 6.09
CGREF1-204ENST00000402550 NACADO15069 1562 aa52.83■■■■■ 6.05
CGREF1-204ENST00000402550 RB1CC1Q8TDY2 1594 aa52.73■■■■■ 6.03
CGREF1-204ENST00000402550 MYO15BQ96JP2 1530 aa52.72■■■■■ 6.03
CGREF1-204ENST00000402550 DCAF1Q9Y4B6 1507 aa52.72■■■■■ 6.03
CGREF1-204ENST00000402550 UNC13AQ9UPW8 1703 aa51.57■■■■■ 5.85
CGREF1-204ENST00000402550 SCRIBQ14160 1630 aa51.46■■■■■ 5.83
CGREF1-204ENST00000402550 PABPN1Q86U42 306 aaKnown RBP eCLIP51.19■■■■■ 5.79
CGREF1-204ENST00000402550 BICRAQ9NZM4 1560 aa51.16■■■■■ 5.78
CGREF1-204ENST00000402550 SHROOM4Q9ULL8 1493 aa50.75■■■■■ 5.72
CGREF1-204ENST00000402550 EIF4G1Q04637 1599 aaKnown RBP49.74■■■■■ 5.55
CGREF1-204ENST00000402550 DNAJC5BQ9UF47 199 aa49.67■■■■■ 5.54
CGREF1-204ENST00000402550 CECR2Q9BXF3 1484 aa49.61■■■■■ 5.53
CGREF1-204ENST00000402550 CC2D2AQ9P2K1 1620 aa49.39■■■■■ 5.5
CGREF1-204ENST00000402550 BAZ1AQ9NRL2 1556 aaPredicted RBP49.31■■■■■ 5.48
CGREF1-204ENST00000402550 SMARCA4P51532 1647 aa49.28■■■■■ 5.48
CGREF1-204ENST00000402550 MROH2BQ7Z745 1585 aa49.14■■■■■ 5.46
CGREF1-204ENST00000402550 ATAD2BQ9ULI0 1458 aa48.9■■■■■ 5.42
CGREF1-204ENST00000402550 SMARCA2P51531 1590 aa48.83■■■■■ 5.41
CGREF1-204ENST00000402550 RSF1Q96T23 1441 aaPredicted RBP48.81■■■■■ 5.4
CGREF1-204ENST00000402550 PEG3Q9GZU2 1588 aa48.8■■■■■ 5.4
CGREF1-204ENST00000402550 NCAPD3P42695 1498 aa48.79■■■■■ 5.4
CGREF1-204ENST00000402550 WIZO95785 1651 aa48.62■■■■■ 5.37
CGREF1-204ENST00000402550 HMGXB3Q12766 1538 aa48.54■■■■■ 5.36
CGREF1-204ENST00000402550 BAZ1BQ9UIG0 1483 aaKnown RBP48.51■■■■■ 5.36
CGREF1-204ENST00000402550 SUPT5HO00267 1087 aaKnown RBP48.11■■■■■ 5.29
CGREF1-204ENST00000402550 TOP2AP11388 1531 aaKnown RBP48.1■■■■■ 5.29
CGREF1-204ENST00000402550 CCDC88BA6NC98 1476 aa47.6■■■■■ 5.21
CGREF1-204ENST00000402550 NESP48681 1621 aa47.44■■■■■ 5.18
CGREF1-204ENST00000402550 CADPSQ9ULU8 1353 aa47.42■■■■■ 5.18
CGREF1-204ENST00000402550 LAMC3Q9Y6N6 1575 aa47.36■■■■■ 5.17
CGREF1-204ENST00000402550 CFTRP13569 1480 aa47.24■■■■■ 5.15
CGREF1-204ENST00000402550 PDS5BQ9NTI5 1447 aa47.05■■■■■ 5.12
CGREF1-204ENST00000402550 ERCC6Q03468 1493 aa46.98■■■■■ 5.11
CGREF1-204ENST00000402550 PRDM2Q13029 1718 aa46.84■■■■■ 5.09
CGREF1-204ENST00000402550 KIF21AQ7Z4S6 1674 aa46.84■■■■■ 5.09
CGREF1-204ENST00000402550 FANCD2Q9BXW9 1451 aa46.83■■■■■ 5.09
CGREF1-204ENST00000402550 CEP164Q9UPV0 1460 aa46.69■■■■■ 5.07
CGREF1-204ENST00000402550 THOC2Q8NI27 1593 aaKnown RBP46.51■■■■■ 5.04
CGREF1-204ENST00000402550 MRC2Q9UBG0 1479 aa46.49■■■■■ 5.03
CGREF1-204ENST00000402550 URB2Q14146 1524 aaKnown RBP46.33■■■■■ 5.01
CGREF1-204ENST00000402550 WDR62O43379 1518 aa46.31■■■■■ 5
CGREF1-204ENST00000402550 CUX2O14529 1486 aa46.23■■■■■ 4.99
CGREF1-204ENST00000402550 ABCC8Q09428 1581 aa46.18■■■■■ 4.98
CGREF1-204ENST00000402550 TOPBP1Q92547 1522 aa46.16■■■■■ 4.98
CGREF1-204ENST00000402550 DNMBPQ6XZF7 1577 aa46.12■■■■■ 4.97
CGREF1-204ENST00000402550 CUX1P39880 1505 aa46.04■■■■■ 4.96
CGREF1-204ENST00000402550 WRNQ14191 1432 aaPredicted RBP eCLIP45.99■■■■■ 4.95
CGREF1-204ENST00000402550 SYNJ1O43426 1573 aa45.81■■■■■ 4.92
CGREF1-204ENST00000402550 POLA1P09884 1462 aaPredicted RBP45.81■■■■■ 4.92
CGREF1-204ENST00000402550 TOP2BQ02880 1626 aa45.79■■■■■ 4.92
CGREF1-204ENST00000402550 FGD5Q6ZNL6 1462 aa45.79■■■■■ 4.92
CGREF1-204ENST00000402550 BIVM-ERCC5R4GMW8 1640 aa45.76■■■■■ 4.92
CGREF1-204ENST00000402550 IFT140Q96RY7 1462 aa45.7■■■■■ 4.91
CGREF1-204ENST00000402550 SOGA1O94964 1423 aa45.68■■■■■ 4.9
CGREF1-204ENST00000402550 RAD54L2Q9Y4B4 1467 aa45.63■■■■■ 4.9
CGREF1-204ENST00000402550 TARBP1Q13395 1621 aaKnown RBP45.6■■■■■ 4.89
CGREF1-204ENST00000402550 ZNF608Q9ULD9 1512 aaPredicted RBP45.48■■■■■ 4.87
CGREF1-204ENST00000402550 TRIM41Q8WV44 630 aa45.4■■■■■ 4.86
CGREF1-204ENST00000402550 ABCA10Q8WWZ4 1543 aa45.37■■■■■ 4.85
CGREF1-204ENST00000402550 TDRD9Q8NDG6 1382 aaKnown RBP45.36■■■■■ 4.85
CGREF1-204ENST00000402550 CHIC1Q5VXU3 224 aa45.35■■■■■ 4.85
CGREF1-204ENST00000402550 AQRO60306 1485 aaKnown RBP eCLIP45.34■■■■■ 4.85
CGREF1-204ENST00000402550 WDR97A6NE52 1622 aa45.32■■■■■ 4.85
CGREF1-204ENST00000402550 EIF4G3O43432 1585 aaKnown RBP45.27■■■■■ 4.84
CGREF1-204ENST00000402550 GAPVD1Q14C86 1478 aa45.13■■■■■ 4.81
CGREF1-204ENST00000402550 ABCA5Q8WWZ7 1642 aa45.1■■■■■ 4.81
CGREF1-204ENST00000402550 GRIN2BQ13224 1484 aa45.02■■■■■ 4.8
CGREF1-204ENST00000402550 KIF27Q86VH2 1401 aa44.97■■■■■ 4.79
CGREF1-204ENST00000402550 PBRM1Q86U86 1689 aa44.93■■■■■ 4.78
CGREF1-204ENST00000402550 SNAPC4Q5SXM2 1469 aa44.86■■■■■ 4.77
CGREF1-204ENST00000402550 MAGI1Q96QZ7 1491 aaPredicted RBP44.83■■■■■ 4.77
CGREF1-204ENST00000402550 ERICH3Q5RHP9 1530 aa44.83■■■■■ 4.77
CGREF1-204ENST00000402550 RUSC2Q8N2Y8 1516 aa44.81■■■■■ 4.76
CGREF1-204ENST00000402550 IGF1RP08069 1367 aa44.78■■■■■ 4.76
CGREF1-204ENST00000402550 FBLN2P98095 1184 aa44.7■■■■■ 4.75
CGREF1-204ENST00000402550 CHMP7Q8WUX9 453 aaPredicted RBP44.66■■■■■ 4.74
CGREF1-204ENST00000402550 SYNJ2O15056 1496 aa44.65■■■■■ 4.74
CGREF1-204ENST00000402550 FHAD1B1AJZ9 1412 aa44.62■■■■■ 4.73
CGREF1-204ENST00000402550 ADAMTS12P58397 1594 aa44.6■■■■■ 4.73
CGREF1-204ENST00000402550 CHD1O14646 1710 aa44.58■■■■■ 4.73
CGREF1-204ENST00000402550 OSCARQ8IYS5 282 aa44.56■■■■■ 4.72
CGREF1-204ENST00000402550 CUL7Q14999 1698 aa44.5■■■■■ 4.71
CGREF1-204ENST00000402550 CARMIL1Q5VZK9 1371 aa44.5■■■■■ 4.71
CGREF1-204ENST00000402550 EEA1Q15075 1411 aa44.49■■■■■ 4.71
CGREF1-204ENST00000402550 FAM9AQ8IZU1 332 aaPredicted RBP44.45■■■■■ 4.71
CGREF1-204ENST00000402550 CSRNP3Q8WYN3 585 aa44.45■■■■■ 4.71
CGREF1-204ENST00000402550 GRIN2AQ12879 1464 aa44.45■■■■■ 4.71
CGREF1-204ENST00000402550 PRXQ9BXM0 1461 aa44.27■■■■■ 4.68
CGREF1-204ENST00000402550 RAPGEF2Q9Y4G8 1499 aa44.27■■■■■ 4.68
CGREF1-204ENST00000402550 DNAJC5Q9H3Z4 198 aa44.23■■■■■ 4.67
CGREF1-204ENST00000402550 NUP160Q12769 1436 aa44.22■■■■■ 4.67
CGREF1-204ENST00000402550 CEP170Q5SW79 1584 aa44.19■■■■■ 4.66
CGREF1-204ENST00000402550 CLASP1Q7Z460 1538 aa44.11■■■■■ 4.65
CGREF1-204ENST00000402550 KIAA0586Q9BVV6 1533 aa43.97■■■■■ 4.63
CGREF1-204ENST00000402550 KIF21BO75037 1637 aa43.96■■■■■ 4.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms