RNA–Protein interactions for RNA: ENST00000336665.9

AGAP1-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AGAP1, Length 5,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP1-202ENST00000336665 DCAF8L2P0C7V8 631 aa44.89■■■■■ 4.78
AGAP1-202ENST00000336665 SUPT5HO00267 1087 aaKnown RBP41.97■■■■■ 4.31
AGAP1-202ENST00000336665 NISCHQ9Y2I1 1504 aa41.26■■■■■ 4.2
AGAP1-202ENST00000336665 SHROOM4Q9ULL8 1493 aa40.98■■■■■ 4.15
AGAP1-202ENST00000336665 FAM9AQ8IZU1 332 aaPredicted RBP40.82■■■■■ 4.13
AGAP1-202ENST00000336665 APLP2Q06481 763 aa40.81■■■■■ 4.12
AGAP1-202ENST00000336665 EHMT2Q96KQ7 1210 aa40.79■■■■■ 4.12
AGAP1-202ENST00000336665 PELP1Q8IZL8 1130 aaKnown RBP40.68■■■■■ 4.1
AGAP1-202ENST00000336665 TTBK1Q5TCY1 1321 aaPredicted RBP39.41■■■■□ 3.9
AGAP1-202ENST00000336665 ATP1B4Q9UN42 357 aaPredicted RBP39.29■■■■□ 3.88
AGAP1-202ENST00000336665 RANGAP1P46060 587 aaPredicted RBP39.28■■■■□ 3.88
AGAP1-202ENST00000336665 PCGF6Q9BYE7 350 aa39.02■■■■□ 3.84
AGAP1-202ENST00000336665 TRIM41Q8WV44 630 aa39.02■■■■□ 3.84
AGAP1-202ENST00000336665 CCER1Q8TC90 406 aaPredicted RBP38.92■■■■□ 3.82
AGAP1-202ENST00000336665 UBTFP17480 764 aaKnown RBP38.83■■■■□ 3.81
AGAP1-202ENST00000336665 ERICH6Q7L0X2 663 aa38.82■■■■□ 3.81
AGAP1-202ENST00000336665 CENPBP07199 599 aaPredicted RBP38.72■■■■□ 3.79
AGAP1-202ENST00000336665 ZEB1P37275 1124 aaPredicted RBP38.72■■■■□ 3.79
AGAP1-202ENST00000336665 NEFLP07196 543 aa38.31■■■■□ 3.72
AGAP1-202ENST00000336665 MYT1LQ9UL68 1186 aa38.27■■■■□ 3.72
AGAP1-202ENST00000336665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.06■■■■□ 3.68
AGAP1-202ENST00000336665 HNRNPUL2Q1KMD3 747 aaKnown RBP38.06■■■■□ 3.68
AGAP1-202ENST00000336665 YTHDC1Q96MU7 727 aaKnown RBP37.65■■■■□ 3.62
AGAP1-202ENST00000336665 POLR3GLQ9BT43 218 aa37.57■■■■□ 3.61
AGAP1-202ENST00000336665 ITGAEP38570 1179 aa37.54■■■■□ 3.6
AGAP1-202ENST00000336665 PPARGC1BQ86YN6 1023 aaKnown RBP37.5■■■■□ 3.59
AGAP1-202ENST00000336665 DAXXQ9UER7 740 aaPredicted RBP37.45■■■■□ 3.59
AGAP1-202ENST00000336665 CHIC1Q5VXU3 224 aa37.29■■■■□ 3.56
AGAP1-202ENST00000336665 TRIM26Q12899 539 aaPredicted RBP37.26■■■■□ 3.55
AGAP1-202ENST00000336665 SLC4A1APQ9BWU0 796 aaKnown RBP37.2■■■■□ 3.55
AGAP1-202ENST00000336665 CNGB1Q14028 1251 aaPredicted RBP36.95■■■■□ 3.51
AGAP1-202ENST00000336665 MYT1Q01538 1121 aa36.8■■■■□ 3.48
AGAP1-202ENST00000336665 FAM50AQ14320 339 aaKnown RBP36.65■■■■□ 3.46
AGAP1-202ENST00000336665 CLSPNQ9HAW4 1339 aa36.63■■■■□ 3.45
AGAP1-202ENST00000336665 TRIM52Q96A61 297 aa36.63■■■■□ 3.45
AGAP1-202ENST00000336665 HRCP23327 699 aa36.59■■■■□ 3.45
AGAP1-202ENST00000336665 LOC105371045A0A1W2PR82 267 aa36.54■■■■□ 3.44
AGAP1-202ENST00000336665 PABPN1Q86U42 306 aaKnown RBP eCLIP36.5■■■■□ 3.43
AGAP1-202ENST00000336665 ZNF316A6NFI3 1004 aaPredicted RBP36.45■■■■□ 3.42
AGAP1-202ENST00000336665 FBLN2P98095 1184 aa36.41■■■■□ 3.42
AGAP1-202ENST00000336665 ABCC9O60706 1549 aa36.37■■■■□ 3.41
AGAP1-202ENST00000336665 ZBTB47Q9UFB7 747 aaPredicted RBP36.27■■■■□ 3.4
AGAP1-202ENST00000336665 RTL5Q5HYW3 569 aaPredicted RBP36.18■■■■□ 3.38
AGAP1-202ENST00000336665 BCANQ96GW7 911 aa36.15■■■■□ 3.38
AGAP1-202ENST00000336665 ZNF326Q5BKZ1 582 aaKnown RBP36.15■■■■□ 3.38
AGAP1-202ENST00000336665 NEUROD1Q13562 356 aa36.14■■■■□ 3.38
AGAP1-202ENST00000336665 NEFMP07197 916 aa36.07■■■■□ 3.36
AGAP1-202ENST00000336665 SLC24A1O60721 1099 aa36.01■■■■□ 3.36
AGAP1-202ENST00000336665 DIEXFQ68CQ4 756 aaKnown RBP35.96■■■■□ 3.35
AGAP1-202ENST00000336665 ESF1Q9H501 851 aaKnown RBP35.9■■■■□ 3.34
AGAP1-202ENST00000336665 ANP32CO43423 234 aa35.89■■■■□ 3.34
AGAP1-202ENST00000336665 CANXP27824 592 aaKnown RBP35.81■■■■□ 3.32
AGAP1-202ENST00000336665 CDK11AQ9UQ88 783 aaPredicted RBP35.77■■■■□ 3.32
AGAP1-202ENST00000336665 ZNF777Q9ULD5 760 aaPredicted RBP35.64■■■■□ 3.3
AGAP1-202ENST00000336665 ARID3CA6NKF2 412 aa35.63■■■■□ 3.29
AGAP1-202ENST00000336665 P3H3Q8IVL6 736 aa35.59■■■■□ 3.29
AGAP1-202ENST00000336665 NPM1P06748 294 aaKnown RBP eCLIP35.58■■■■□ 3.29
AGAP1-202ENST00000336665 STAG3Q9UJ98 1225 aa35.54■■■■□ 3.28
AGAP1-202ENST00000336665 BCL11AQ9H165 835 aa35.52■■■■□ 3.28
AGAP1-202ENST00000336665 CSRNP3Q8WYN3 585 aa35.38■■■■□ 3.25
AGAP1-202ENST00000336665 CHGAP10645 457 aaKnown RBP35.35■■■■□ 3.25
AGAP1-202ENST00000336665 PLPPR3Q6T4P5 718 aa35.23■■■■□ 3.23
AGAP1-202ENST00000336665 TONSLQ96HA7 1378 aa35■■■■□ 3.19
AGAP1-202ENST00000336665 ANP32AP39687 249 aaKnown RBP34.96■■■■□ 3.19
AGAP1-202ENST00000336665 GTF3C3Q9Y5Q9 886 aa34.88■■■■□ 3.17
AGAP1-202ENST00000336665 HSP90AA1P07900 732 aaKnown RBP34.85■■■■□ 3.17
AGAP1-202ENST00000336665 TSPY4P0CV99 314 aa34.84■■■■□ 3.17
AGAP1-202ENST00000336665 TSPY10P0CW01 314 aa34.84■■■■□ 3.17
AGAP1-202ENST00000336665 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.84■■■■□ 3.178e-7■■■□□ 15.6
AGAP1-202ENST00000336665 UPF2Q9HAU5 1272 aaKnown RBP34.81■■■■□ 3.16
AGAP1-202ENST00000336665 SCRIBQ14160 1630 aa34.8■■■■□ 3.16
AGAP1-202ENST00000336665 ANP32BQ92688 251 aaKnown RBP34.79■■■■□ 3.16
AGAP1-202ENST00000336665 SCAF1Q9H7N4 1312 aaKnown RBP34.74■■■■□ 3.15
AGAP1-202ENST00000336665 CHMP7Q8WUX9 453 aaPredicted RBP34.73■■■■□ 3.15
AGAP1-202ENST00000336665 NPM2Q86SE8 214 aaKnown RBP34.71■■■■□ 3.15
AGAP1-202ENST00000336665 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.64■■■■□ 3.14
AGAP1-202ENST00000336665 CHIC2Q9UKJ5 165 aa34.63■■■■□ 3.13
AGAP1-202ENST00000336665 WDR43Q15061 677 aaKnown RBP eCLIP34.6■■■■□ 3.13
AGAP1-202ENST00000336665 A0A0G2JS52 829 aa34.58■■■■□ 3.13
AGAP1-202ENST00000336665 TMC1Q8TDI8 760 aa34.56■■■■□ 3.12
AGAP1-202ENST00000336665 PPP1R15AO75807 674 aaPredicted RBP34.53■■■■□ 3.12
AGAP1-202ENST00000336665 HNRNPUQ00839 825 aaKnown RBP eCLIP34.53■■■■□ 3.12
AGAP1-202ENST00000336665 FAM9BQ8IZU0 186 aa34.52■■■■□ 3.12
AGAP1-202ENST00000336665 MTUS2Q5JR59 1369 aa34.52■■■■□ 3.12
AGAP1-202ENST00000336665 KDM2AQ9Y2K7 1162 aa34.45■■■■□ 3.11
AGAP1-202ENST00000336665 C14orf37Q86TY3 774 aa34.45■■■■□ 3.11
AGAP1-202ENST00000336665 SALL2Q9Y467 1007 aaPredicted RBP34.43■■■■□ 3.1
AGAP1-202ENST00000336665 MYH16Q9H6N6 1097 aa34.4■■■■□ 3.1
AGAP1-202ENST00000336665 DDX10Q13206 875 aaKnown RBP34.38■■■■□ 3.09
AGAP1-202ENST00000336665 ZBTB7CA1YPR0 619 aa34.37■■■■□ 3.09
AGAP1-202ENST00000336665 FKBP8Q14318 412 aa34.32■■■■□ 3.09
AGAP1-202ENST00000336665 HAP1P54257 671 aaPredicted RBP34.3■■■■□ 3.08
AGAP1-202ENST00000336665 PLEKHD1A6NEE1 506 aa34.3■■■■□ 3.08
AGAP1-202ENST00000336665 KCNH8Q96L42 1107 aa34.29■■■■□ 3.08
AGAP1-202ENST00000336665 ACIN1Q9UKV3 1341 aaKnown RBP34.29■■■■□ 3.08
AGAP1-202ENST00000336665 CDK11BP21127 795 aaKnown RBP34.26■■■■□ 3.07
AGAP1-202ENST00000336665 ARID4BQ4LE39 1312 aaPredicted RBP34.25■■■■□ 3.07
AGAP1-202ENST00000336665 CCDC136Q96JN2 1154 aa34.24■■■■□ 3.07
AGAP1-202ENST00000336665 MRS2Q9HD23 443 aa34.22■■■■□ 3.07
AGAP1-202ENST00000336665 PLEKHG5O94827 1062 aa34.19■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms