RNA–Protein interactions for RNA: ENST00000359574.7

LFNG-203, Transcript of LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LFNG, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LFNG-203ENST00000359574 NISCHQ9Y2I1 1504 aa69.35■■■■■ 8.69
LFNG-203ENST00000359574 CCDC180Q9P1Z9 1646 aa61.92■■■■■ 7.5
LFNG-203ENST00000359574 ABCC9O60706 1549 aa61.7■■■■■ 7.47
LFNG-203ENST00000359574 RB1CC1Q8TDY2 1594 aa58.81■■■■■ 7.01
LFNG-203ENST00000359574 NACADO15069 1562 aa58.52■■■■■ 6.96
LFNG-203ENST00000359574 DCAF8L2P0C7V8 631 aa58.41■■■■■ 6.94
LFNG-203ENST00000359574 MYO15BQ96JP2 1530 aa57.87■■■■■ 6.85
LFNG-203ENST00000359574 ZCCHC6Q5VYS8 1495 aaKnown RBP57.57■■■■■ 6.81
LFNG-203ENST00000359574 DNAJC5BQ9UF47 199 aa57.57■■■■■ 6.81
LFNG-203ENST00000359574 PABPN1Q86U42 306 aaKnown RBP eCLIP57.57■■■■■ 6.81
LFNG-203ENST00000359574 UNC13AQ9UPW8 1703 aa57.37■■■■■ 6.77
LFNG-203ENST00000359574 DCAF1Q9Y4B6 1507 aa57.28■■■■■ 6.76
LFNG-203ENST00000359574 BICRAQ9NZM4 1560 aa57.12■■■■■ 6.74
LFNG-203ENST00000359574 SCRIBQ14160 1630 aa56.56■■■■■ 6.64
LFNG-203ENST00000359574 SHROOM4Q9ULL8 1493 aa56.37■■■■■ 6.61
LFNG-203ENST00000359574 CC2D2AQ9P2K1 1620 aa55.69■■■■■ 6.51
LFNG-203ENST00000359574 EIF4G1Q04637 1599 aaKnown RBP55.68■■■■■ 6.5
LFNG-203ENST00000359574 CECR2Q9BXF3 1484 aa55.52■■■■■ 6.48
LFNG-203ENST00000359574 NCAPD3P42695 1498 aa54.08■■■■■ 6.25
LFNG-203ENST00000359574 ATAD2BQ9ULI0 1458 aa53.99■■■■■ 6.23
LFNG-203ENST00000359574 SMARCA4P51532 1647 aa53.97■■■■■ 6.23
LFNG-203ENST00000359574 SMARCA2P51531 1590 aa53.8■■■■■ 6.2
LFNG-203ENST00000359574 BAZ1AQ9NRL2 1556 aaPredicted RBP53.77■■■■■ 6.2
LFNG-203ENST00000359574 HMGXB3Q12766 1538 aa53.68■■■■■ 6.18
LFNG-203ENST00000359574 MROH2BQ7Z745 1585 aa53.47■■■■■ 6.15
LFNG-203ENST00000359574 BAZ1BQ9UIG0 1483 aaKnown RBP53.46■■■■■ 6.15
LFNG-203ENST00000359574 PEG3Q9GZU2 1588 aa53.45■■■■■ 6.15
LFNG-203ENST00000359574 ERCC6Q03468 1493 aa53.22■■■■■ 6.11
LFNG-203ENST00000359574 NESP48681 1621 aa53.13■■■■■ 6.1
LFNG-203ENST00000359574 CUX2O14529 1486 aa52.96■■■■■ 6.07
LFNG-203ENST00000359574 WIZO95785 1651 aa52.78■■■■■ 6.04
LFNG-203ENST00000359574 LAMC3Q9Y6N6 1575 aa52.72■■■■■ 6.03
LFNG-203ENST00000359574 RSF1Q96T23 1441 aaPredicted RBP52.54■■■■■ 6
LFNG-203ENST00000359574 DNAJC5Q9H3Z4 198 aa52.51■■■■■ 6
LFNG-203ENST00000359574 CADPSQ9ULU8 1353 aa52.48■■■■■ 5.99
LFNG-203ENST00000359574 PDS5BQ9NTI5 1447 aa52.47■■■■■ 5.99
LFNG-203ENST00000359574 THOC2Q8NI27 1593 aaKnown RBP52.43■■■■■ 5.98
LFNG-203ENST00000359574 KIF21AQ7Z4S6 1674 aa52.32■■■■■ 5.97
LFNG-203ENST00000359574 TOP2AP11388 1531 aaKnown RBP52.18■■■■■ 5.94
LFNG-203ENST00000359574 MRC2Q9UBG0 1479 aa52■■■■■ 5.91
LFNG-203ENST00000359574 CFTRP13569 1480 aa51.96■■■■■ 5.91
LFNG-203ENST00000359574 FANCD2Q9BXW9 1451 aa51.88■■■■■ 5.89
LFNG-203ENST00000359574 CEP164Q9UPV0 1460 aa51.86■■■■■ 5.89
LFNG-203ENST00000359574 WDR62O43379 1518 aa51.83■■■■■ 5.89
LFNG-203ENST00000359574 CCDC88BA6NC98 1476 aa51.62■■■■■ 5.85
LFNG-203ENST00000359574 URB2Q14146 1524 aaKnown RBP51.42■■■■■ 5.82
LFNG-203ENST00000359574 PRDM2Q13029 1718 aa51.25■■■■■ 5.79
LFNG-203ENST00000359574 TOPBP1Q92547 1522 aa50.93■■■■■ 5.74
LFNG-203ENST00000359574 IFT140Q96RY7 1462 aa50.82■■■■■ 5.73
LFNG-203ENST00000359574 ABCC8Q09428 1581 aa50.78■■■■■ 5.72
LFNG-203ENST00000359574 ZNF608Q9ULD9 1512 aaPredicted RBP50.74■■■■■ 5.71
LFNG-203ENST00000359574 DNMBPQ6XZF7 1577 aa50.74■■■■■ 5.71
LFNG-203ENST00000359574 OSCARQ8IYS5 282 aa50.65■■■■■ 5.7
LFNG-203ENST00000359574 SUPT5HO00267 1087 aaKnown RBP50.55■■■■■ 5.68
LFNG-203ENST00000359574 POLA1P09884 1462 aaPredicted RBP50.44■■■■■ 5.67
LFNG-203ENST00000359574 TRIM41Q8WV44 630 aa50.41■■■■■ 5.66
LFNG-203ENST00000359574 EIF4G3O43432 1585 aaKnown RBP50.4■■■■■ 5.66
LFNG-203ENST00000359574 TARBP1Q13395 1621 aaKnown RBP50.39■■■■■ 5.66
LFNG-203ENST00000359574 AQRO60306 1485 aaKnown RBP eCLIP50.34■■■■■ 5.65
LFNG-203ENST00000359574 RAD54L2Q9Y4B4 1467 aa50.27■■■■■ 5.64
LFNG-203ENST00000359574 SOGA1O94964 1423 aa50.22■■■■■ 5.63
LFNG-203ENST00000359574 CUX1P39880 1505 aa50.21■■■■■ 5.63
LFNG-203ENST00000359574 FGD5Q6ZNL6 1462 aa50.18■■■■■ 5.62
LFNG-203ENST00000359574 TDRD9Q8NDG6 1382 aaKnown RBP50.11■■■■■ 5.61
LFNG-203ENST00000359574 FBLN2P98095 1184 aa49.92■■■■■ 5.58
LFNG-203ENST00000359574 CHD1O14646 1710 aa49.87■■■■■ 5.57
LFNG-203ENST00000359574 RIMBP3CA6NJZ7 1639 aa49.87■■■■■ 5.57
LFNG-203ENST00000359574 RIMBP3BA6NNM3 1639 aa49.87■■■■■ 5.57
LFNG-203ENST00000359574 RIMBP3Q9UFD9 1639 aa49.87■■■■■ 5.57
LFNG-203ENST00000359574 WDR97A6NE52 1622 aa49.86■■■■■ 5.57
LFNG-203ENST00000359574 ARHGEF11O15085 1522 aa49.82■■■■■ 5.57
LFNG-203ENST00000359574 SNAPC4Q5SXM2 1469 aa49.82■■■■■ 5.57
LFNG-203ENST00000359574 GRIN2BQ13224 1484 aa49.73■■■■■ 5.55
LFNG-203ENST00000359574 MAGI1Q96QZ7 1491 aaPredicted RBP49.67■■■■■ 5.54
LFNG-203ENST00000359574 ABCA10Q8WWZ4 1543 aa49.63■■■■■ 5.54
LFNG-203ENST00000359574 CHMP7Q8WUX9 453 aaPredicted RBP49.61■■■■■ 5.53
LFNG-203ENST00000359574 GAPVD1Q14C86 1478 aa49.61■■■■■ 5.53
LFNG-203ENST00000359574 WRNQ14191 1432 aaPredicted RBP eCLIP49.53■■■■■ 5.52
LFNG-203ENST00000359574 SYNJ2O15056 1496 aa49.51■■■■■ 5.52
LFNG-203ENST00000359574 ABCA5Q8WWZ7 1642 aa49.47■■■■■ 5.51
LFNG-203ENST00000359574 CYB5RLQ6IPT4 315 aa49.47■■■■■ 5.51
LFNG-203ENST00000359574 TOP2BQ02880 1626 aa49.46■■■■■ 5.51
LFNG-203ENST00000359574 SYNJ1O43426 1573 aa49.45■■■■■ 5.51
LFNG-203ENST00000359574 PBRM1Q86U86 1689 aa49.43■■■■■ 5.5
LFNG-203ENST00000359574 BIVM-ERCC5R4GMW8 1640 aa49.42■■■■■ 5.5
LFNG-203ENST00000359574 CLASP1Q7Z460 1538 aa49.42■■■■■ 5.5
LFNG-203ENST00000359574 ARAP1Q96P48 1450 aa49.38■■■■■ 5.5
LFNG-203ENST00000359574 GRIN2AQ12879 1464 aa49.09■■■■■ 5.45
LFNG-203ENST00000359574 ADAMTS12P58397 1594 aa49.09■■■■■ 5.45
LFNG-203ENST00000359574 FHAD1B1AJZ9 1412 aa49■■■■■ 5.43
LFNG-203ENST00000359574 ERICH3Q5RHP9 1530 aa48.99■■■■■ 5.43
LFNG-203ENST00000359574 NUP160Q12769 1436 aa48.93■■■■■ 5.42
LFNG-203ENST00000359574 CEP170Q5SW79 1584 aa48.87■■■■■ 5.41
LFNG-203ENST00000359574 TRHP20396 242 aaPredicted RBP48.77■■■■■ 5.4
LFNG-203ENST00000359574 ERCC6L2Q5T890 1561 aa48.71■■■■■ 5.39
LFNG-203ENST00000359574 SHROOM2Q13796 1616 aa48.59■■■■■ 5.37
LFNG-203ENST00000359574 KIF27Q86VH2 1401 aa48.55■■■■■ 5.36
LFNG-203ENST00000359574 IGF1RP08069 1367 aa48.54■■■■■ 5.36
LFNG-203ENST00000359574 JPH4Q96JJ6 628 aa48.44■■■■■ 5.35
LFNG-203ENST00000359574 PRG4Q92954 1404 aaPredicted RBP48.44■■■■■ 5.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms