Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
ZC3HC1Q86WB0 WASH5P-204ENST00000632292 975 ntBASIC26.63■■□□□ 1.85
ZC3HC1Q86WB0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ZC3HC1Q86WB0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ZC3HC1Q86WB0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ZC3HC1Q86WB0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
ZC3HC1Q86WB0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
ZC3HC1Q86WB0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
ZC3HC1Q86WB0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ZC3HC1Q86WB0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ZC3HC1Q86WB0 AL135925.1-201ENST00000605920 1701 ntBASIC26.59■■□□□ 1.85
ZC3HC1Q86WB0 AC139426.1-201ENST00000568218 2529 ntBASIC26.59■■□□□ 1.85
ZC3HC1Q86WB0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ZC3HC1Q86WB0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ZC3HC1Q86WB0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ZC3HC1Q86WB0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
ZC3HC1Q86WB0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ZC3HC1Q86WB0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ZC3HC1Q86WB0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.53■■□□□ 1.84
ZC3HC1Q86WB0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
ZC3HC1Q86WB0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.52■■□□□ 1.84
ZC3HC1Q86WB0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
ZC3HC1Q86WB0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
ZC3HC1Q86WB0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.51■■□□□ 1.83
ZC3HC1Q86WB0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.5■■□□□ 1.83
ZC3HC1Q86WB0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.5■■□□□ 1.83
ZC3HC1Q86WB0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
ZC3HC1Q86WB0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.49■■□□□ 1.83
ZC3HC1Q86WB0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ZC3HC1Q86WB0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
ZC3HC1Q86WB0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.48■■□□□ 1.83
ZC3HC1Q86WB0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.48■■□□□ 1.83
ZC3HC1Q86WB0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
ZC3HC1Q86WB0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ZC3HC1Q86WB0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
ZC3HC1Q86WB0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
ZC3HC1Q86WB0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
ZC3HC1Q86WB0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
ZC3HC1Q86WB0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
ZC3HC1Q86WB0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ZC3HC1Q86WB0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.43■■□□□ 1.82
ZC3HC1Q86WB0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
ZC3HC1Q86WB0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
ZC3HC1Q86WB0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.43■■□□□ 1.82
ZC3HC1Q86WB0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
ZC3HC1Q86WB0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
ZC3HC1Q86WB0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
ZC3HC1Q86WB0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
ZC3HC1Q86WB0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
ZC3HC1Q86WB0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ZC3HC1Q86WB0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.39■■□□□ 1.82
ZC3HC1Q86WB0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ZC3HC1Q86WB0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ZC3HC1Q86WB0 RARRES2P7-201ENST00000567349 469 ntBASIC26.38■■□□□ 1.81
ZC3HC1Q86WB0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ZC3HC1Q86WB0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.36■■□□□ 1.81
ZC3HC1Q86WB0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ZC3HC1Q86WB0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
ZC3HC1Q86WB0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ZC3HC1Q86WB0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZC3HC1Q86WB0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZC3HC1Q86WB0 SETD8P1-201ENST00000623146 1180 ntBASIC26.34■■□□□ 1.81
ZC3HC1Q86WB0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
ZC3HC1Q86WB0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.33■■□□□ 1.81
ZC3HC1Q86WB0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ZC3HC1Q86WB0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ZC3HC1Q86WB0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
ZC3HC1Q86WB0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZC3HC1Q86WB0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZC3HC1Q86WB0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.31■■□□□ 1.8
ZC3HC1Q86WB0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ZC3HC1Q86WB0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ZC3HC1Q86WB0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ZC3HC1Q86WB0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ZC3HC1Q86WB0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ZC3HC1Q86WB0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ZC3HC1Q86WB0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
ZC3HC1Q86WB0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.28■■□□□ 1.8
ZC3HC1Q86WB0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ZC3HC1Q86WB0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ZC3HC1Q86WB0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ZC3HC1Q86WB0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ZC3HC1Q86WB0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.25■■□□□ 1.79
ZC3HC1Q86WB0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ZC3HC1Q86WB0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ZC3HC1Q86WB0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
ZC3HC1Q86WB0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ZC3HC1Q86WB0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ZC3HC1Q86WB0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ZC3HC1Q86WB0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.22■■□□□ 1.79
ZC3HC1Q86WB0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ZC3HC1Q86WB0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
ZC3HC1Q86WB0 AC010864.1-201ENST00000609407 1511 ntBASIC26.2■■□□□ 1.79
ZC3HC1Q86WB0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ZC3HC1Q86WB0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
ZC3HC1Q86WB0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ZC3HC1Q86WB0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.19■■□□□ 1.78
ZC3HC1Q86WB0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ZC3HC1Q86WB0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ZC3HC1Q86WB0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms