Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SHC4Q6S5L8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SHC4Q6S5L8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SHC4Q6S5L8 AC139426.1-201ENST00000568218 2529 ntBASIC30.29■■■□□ 2.44
SHC4Q6S5L8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.27■■■□□ 2.44
SHC4Q6S5L8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
SHC4Q6S5L8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SHC4Q6S5L8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SHC4Q6S5L8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SHC4Q6S5L8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
SHC4Q6S5L8 AL135925.1-201ENST00000605920 1701 ntBASIC30.25■■■□□ 2.43
SHC4Q6S5L8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SHC4Q6S5L8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SHC4Q6S5L8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SHC4Q6S5L8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SHC4Q6S5L8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.2■■■□□ 2.43
SHC4Q6S5L8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
SHC4Q6S5L8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.19■■■□□ 2.42
SHC4Q6S5L8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SHC4Q6S5L8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SHC4Q6S5L8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SHC4Q6S5L8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.17■■■□□ 2.42
SHC4Q6S5L8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SHC4Q6S5L8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SHC4Q6S5L8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SHC4Q6S5L8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.15■■■□□ 2.42
SHC4Q6S5L8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
SHC4Q6S5L8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.14■■■□□ 2.42
SHC4Q6S5L8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.14■■■□□ 2.42
SHC4Q6S5L8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SHC4Q6S5L8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.13■■■□□ 2.41
SHC4Q6S5L8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.13■■■□□ 2.41
SHC4Q6S5L8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
SHC4Q6S5L8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SHC4Q6S5L8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
SHC4Q6S5L8 RARRES2P7-201ENST00000567349 469 ntBASIC30.12■■■□□ 2.41
SHC4Q6S5L8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SHC4Q6S5L8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
SHC4Q6S5L8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.11■■■□□ 2.41
SHC4Q6S5L8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SHC4Q6S5L8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SHC4Q6S5L8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SHC4Q6S5L8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SHC4Q6S5L8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SHC4Q6S5L8 SETD8P1-201ENST00000623146 1180 ntBASIC30.08■■■□□ 2.41
SHC4Q6S5L8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
SHC4Q6S5L8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SHC4Q6S5L8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
SHC4Q6S5L8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
SHC4Q6S5L8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.06■■■□□ 2.4
SHC4Q6S5L8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SHC4Q6S5L8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
SHC4Q6S5L8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SHC4Q6S5L8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.05■■■□□ 2.4
SHC4Q6S5L8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SHC4Q6S5L8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
SHC4Q6S5L8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.03■■■□□ 2.4
SHC4Q6S5L8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.02■■■□□ 2.4
SHC4Q6S5L8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SHC4Q6S5L8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SHC4Q6S5L8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SHC4Q6S5L8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SHC4Q6S5L8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SHC4Q6S5L8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SHC4Q6S5L8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SHC4Q6S5L8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.98■■■□□ 2.39
SHC4Q6S5L8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SHC4Q6S5L8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
SHC4Q6S5L8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.98■■■□□ 2.39
SHC4Q6S5L8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SHC4Q6S5L8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.96■■■□□ 2.39
SHC4Q6S5L8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SHC4Q6S5L8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
SHC4Q6S5L8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.93■■■□□ 2.38
SHC4Q6S5L8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
SHC4Q6S5L8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SHC4Q6S5L8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SHC4Q6S5L8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.92■■■□□ 2.38
SHC4Q6S5L8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SHC4Q6S5L8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
SHC4Q6S5L8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
SHC4Q6S5L8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SHC4Q6S5L8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
SHC4Q6S5L8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.88■■■□□ 2.37
SHC4Q6S5L8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHC4Q6S5L8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHC4Q6S5L8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.86■■■□□ 2.37
SHC4Q6S5L8 AC136428.2-201ENST00000563187 214 ntBASIC29.86■■■□□ 2.37
SHC4Q6S5L8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SHC4Q6S5L8 CAHM-201ENST00000604200 896 ntBASIC29.85■■■□□ 2.37
SHC4Q6S5L8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
SHC4Q6S5L8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SHC4Q6S5L8 AC010864.1-201ENST00000609407 1511 ntBASIC29.83■■■□□ 2.37
SHC4Q6S5L8 AL391121.1-201ENST00000607967 1349 ntBASIC29.83■■■□□ 2.37
SHC4Q6S5L8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SHC4Q6S5L8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
SHC4Q6S5L8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.82■■■□□ 2.36
SHC4Q6S5L8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SHC4Q6S5L8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SHC4Q6S5L8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.81■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms