RNA–Protein interactions for RNA: ENST00000563187.1

AC136428.2-201, humanhuman

BASIC

Gene AC136428.2, Length 214 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC136428.2-201ENST00000563187 NISCHQ9Y2I1 1504 aa68.74■■■■■ 8.59
AC136428.2-201ENST00000563187 CCDC180Q9P1Z9 1646 aa61.51■■■■■ 7.44
AC136428.2-201ENST00000563187 ABCC9O60706 1549 aa60.88■■■■■ 7.34
AC136428.2-201ENST00000563187 RB1CC1Q8TDY2 1594 aa58.2■■■■■ 6.91
AC136428.2-201ENST00000563187 NACADO15069 1562 aa57.95■■■■■ 6.87
AC136428.2-201ENST00000563187 DCAF8L2P0C7V8 631 aa57.52■■■■■ 6.8
AC136428.2-201ENST00000563187 MYO15BQ96JP2 1530 aa57.36■■■■■ 6.77
AC136428.2-201ENST00000563187 ZCCHC6Q5VYS8 1495 aaKnown RBP57.13■■■■■ 6.74
AC136428.2-201ENST00000563187 UNC13AQ9UPW8 1703 aa57.08■■■■■ 6.73
AC136428.2-201ENST00000563187 DCAF1Q9Y4B6 1507 aa56.84■■■■■ 6.69
AC136428.2-201ENST00000563187 PABPN1Q86U42 306 aaKnown RBP eCLIP56.7■■■■■ 6.67
AC136428.2-201ENST00000563187 DNAJC5BQ9UF47 199 aa56.66■■■■■ 6.66
AC136428.2-201ENST00000563187 BICRAQ9NZM4 1560 aa56.61■■■■■ 6.65
AC136428.2-201ENST00000563187 SCRIBQ14160 1630 aa56.05■■■■■ 6.56
AC136428.2-201ENST00000563187 SHROOM4Q9ULL8 1493 aa55.81■■■■■ 6.52
AC136428.2-201ENST00000563187 EIF4G1Q04637 1599 aaKnown RBP55.11■■■■■ 6.41
AC136428.2-201ENST00000563187 CC2D2AQ9P2K1 1620 aa55.1■■■■■ 6.41
AC136428.2-201ENST00000563187 CECR2Q9BXF3 1484 aa54.78■■■■■ 6.36
AC136428.2-201ENST00000563187 SMARCA4P51532 1647 aa53.55■■■■■ 6.16
AC136428.2-201ENST00000563187 NCAPD3P42695 1498 aa53.48■■■■■ 6.15
AC136428.2-201ENST00000563187 ATAD2BQ9ULI0 1458 aa53.41■■■■■ 6.14
AC136428.2-201ENST00000563187 BAZ1AQ9NRL2 1556 aaPredicted RBP53.29■■■■■ 6.12
AC136428.2-201ENST00000563187 SMARCA2P51531 1590 aa53.27■■■■■ 6.12
AC136428.2-201ENST00000563187 HMGXB3Q12766 1538 aa53.19■■■■■ 6.11
AC136428.2-201ENST00000563187 PEG3Q9GZU2 1588 aa53.05■■■■■ 6.08
AC136428.2-201ENST00000563187 MROH2BQ7Z745 1585 aa52.99■■■■■ 6.07
AC136428.2-201ENST00000563187 BAZ1BQ9UIG0 1483 aaKnown RBP52.88■■■■■ 6.06
AC136428.2-201ENST00000563187 NESP48681 1621 aa52.51■■■■■ 6
AC136428.2-201ENST00000563187 ERCC6Q03468 1493 aa52.46■■■■■ 5.99
AC136428.2-201ENST00000563187 WIZO95785 1651 aa52.41■■■■■ 5.98
AC136428.2-201ENST00000563187 CUX2O14529 1486 aa52.26■■■■■ 5.96
AC136428.2-201ENST00000563187 LAMC3Q9Y6N6 1575 aa52.21■■■■■ 5.95
AC136428.2-201ENST00000563187 RSF1Q96T23 1441 aaPredicted RBP52.06■■■■■ 5.92
AC136428.2-201ENST00000563187 THOC2Q8NI27 1593 aaKnown RBP51.95■■■■■ 5.91
AC136428.2-201ENST00000563187 KIF21AQ7Z4S6 1674 aa51.91■■■■■ 5.9
AC136428.2-201ENST00000563187 CADPSQ9ULU8 1353 aa51.83■■■■■ 5.89
AC136428.2-201ENST00000563187 PDS5BQ9NTI5 1447 aa51.8■■■■■ 5.88
AC136428.2-201ENST00000563187 TOP2AP11388 1531 aaKnown RBP51.76■■■■■ 5.88
AC136428.2-201ENST00000563187 DNAJC5Q9H3Z4 198 aa51.54■■■■■ 5.84
AC136428.2-201ENST00000563187 CFTRP13569 1480 aa51.42■■■■■ 5.82
AC136428.2-201ENST00000563187 MRC2Q9UBG0 1479 aa51.39■■■■■ 5.82
AC136428.2-201ENST00000563187 WDR62O43379 1518 aa51.31■■■■■ 5.8
AC136428.2-201ENST00000563187 FANCD2Q9BXW9 1451 aa51.29■■■■■ 5.8
AC136428.2-201ENST00000563187 CEP164Q9UPV0 1460 aa51.28■■■■■ 5.8
AC136428.2-201ENST00000563187 CCDC88BA6NC98 1476 aa51.13■■■■■ 5.78
AC136428.2-201ENST00000563187 PRDM2Q13029 1718 aa51.07■■■■■ 5.77
AC136428.2-201ENST00000563187 URB2Q14146 1524 aaKnown RBP50.88■■■■■ 5.74
AC136428.2-201ENST00000563187 TOPBP1Q92547 1522 aa50.41■■■■■ 5.66
AC136428.2-201ENST00000563187 DNMBPQ6XZF7 1577 aa50.27■■■■■ 5.64
AC136428.2-201ENST00000563187 ABCC8Q09428 1581 aa50.25■■■■■ 5.63
AC136428.2-201ENST00000563187 IFT140Q96RY7 1462 aa50.22■■■■■ 5.63
AC136428.2-201ENST00000563187 ZNF608Q9ULD9 1512 aaPredicted RBP50.16■■■■■ 5.62
AC136428.2-201ENST00000563187 SUPT5HO00267 1087 aaKnown RBP49.98■■■■■ 5.59
AC136428.2-201ENST00000563187 TARBP1Q13395 1621 aaKnown RBP49.98■■■■■ 5.59
AC136428.2-201ENST00000563187 EIF4G3O43432 1585 aaKnown RBP49.95■■■■■ 5.59
AC136428.2-201ENST00000563187 POLA1P09884 1462 aaPredicted RBP49.93■■■■■ 5.58
AC136428.2-201ENST00000563187 OSCARQ8IYS5 282 aa49.82■■■■■ 5.57
AC136428.2-201ENST00000563187 CUX1P39880 1505 aa49.77■■■■■ 5.56
AC136428.2-201ENST00000563187 AQRO60306 1485 aaKnown RBP eCLIP49.72■■■■■ 5.55
AC136428.2-201ENST00000563187 RAD54L2Q9Y4B4 1467 aa49.72■■■■■ 5.55
AC136428.2-201ENST00000563187 FGD5Q6ZNL6 1462 aa49.68■■■■■ 5.54
AC136428.2-201ENST00000563187 SOGA1O94964 1423 aa49.62■■■■■ 5.53
AC136428.2-201ENST00000563187 CHD1O14646 1710 aa49.49■■■■■ 5.51
AC136428.2-201ENST00000563187 WDR97A6NE52 1622 aa49.46■■■■■ 5.51
AC136428.2-201ENST00000563187 TDRD9Q8NDG6 1382 aaKnown RBP49.46■■■■■ 5.51
AC136428.2-201ENST00000563187 TRIM41Q8WV44 630 aa49.44■■■■■ 5.51
AC136428.2-201ENST00000563187 RIMBP3CA6NJZ7 1639 aa49.31■■■■■ 5.48
AC136428.2-201ENST00000563187 RIMBP3BA6NNM3 1639 aa49.31■■■■■ 5.48
AC136428.2-201ENST00000563187 RIMBP3Q9UFD9 1639 aa49.31■■■■■ 5.48
AC136428.2-201ENST00000563187 SNAPC4Q5SXM2 1469 aa49.25■■■■■ 5.48
AC136428.2-201ENST00000563187 ARHGEF11O15085 1522 aa49.19■■■■■ 5.46
AC136428.2-201ENST00000563187 ABCA10Q8WWZ4 1543 aa49.16■■■■■ 5.46
AC136428.2-201ENST00000563187 GRIN2BQ13224 1484 aa49.16■■■■■ 5.46
AC136428.2-201ENST00000563187 BIVM-ERCC5R4GMW8 1640 aa49.14■■■■■ 5.46
AC136428.2-201ENST00000563187 PBRM1Q86U86 1689 aa49.14■■■■■ 5.46
AC136428.2-201ENST00000563187 MAGI1Q96QZ7 1491 aaPredicted RBP49.13■■■■■ 5.46
AC136428.2-201ENST00000563187 FBLN2P98095 1184 aa49.12■■■■■ 5.45
AC136428.2-201ENST00000563187 ABCA5Q8WWZ7 1642 aa49.11■■■■■ 5.45
AC136428.2-201ENST00000563187 TOP2BQ02880 1626 aa49.1■■■■■ 5.45
AC136428.2-201ENST00000563187 SYNJ1O43426 1573 aa49.09■■■■■ 5.45
AC136428.2-201ENST00000563187 GAPVD1Q14C86 1478 aa49.06■■■■■ 5.44
AC136428.2-201ENST00000563187 WRNQ14191 1432 aaPredicted RBP eCLIP49.05■■■■■ 5.44
AC136428.2-201ENST00000563187 SYNJ2O15056 1496 aa48.96■■■■■ 5.43
AC136428.2-201ENST00000563187 CLASP1Q7Z460 1538 aa48.93■■■■■ 5.42
AC136428.2-201ENST00000563187 CHMP7Q8WUX9 453 aaPredicted RBP48.87■■■■■ 5.41
AC136428.2-201ENST00000563187 ARAP1Q96P48 1450 aa48.76■■■■■ 5.4
AC136428.2-201ENST00000563187 ADAMTS12P58397 1594 aa48.68■■■■■ 5.38
AC136428.2-201ENST00000563187 CYB5RLQ6IPT4 315 aa48.64■■■■■ 5.38
AC136428.2-201ENST00000563187 GRIN2AQ12879 1464 aa48.57■■■■■ 5.37
AC136428.2-201ENST00000563187 ERICH3Q5RHP9 1530 aa48.54■■■■■ 5.36
AC136428.2-201ENST00000563187 FHAD1B1AJZ9 1412 aa48.45■■■■■ 5.35
AC136428.2-201ENST00000563187 CEP170Q5SW79 1584 aa48.44■■■■■ 5.35
AC136428.2-201ENST00000563187 NUP160Q12769 1436 aa48.41■■■■■ 5.34
AC136428.2-201ENST00000563187 ERCC6L2Q5T890 1561 aa48.22■■■■■ 5.31
AC136428.2-201ENST00000563187 SHROOM2Q13796 1616 aa48.2■■■■■ 5.31
AC136428.2-201ENST00000563187 KIF27Q86VH2 1401 aa48.05■■■■■ 5.28
AC136428.2-201ENST00000563187 IGF1RP08069 1367 aa48■■■■■ 5.28
AC136428.2-201ENST00000563187 RUSC2Q8N2Y8 1516 aa47.99■■■■■ 5.27
AC136428.2-201ENST00000563187 CUL7Q14999 1698 aa47.96■■■■■ 5.27
AC136428.2-201ENST00000563187 TRHP20396 242 aaPredicted RBP47.86■■■■■ 5.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms