Protein–RNA interactions for Protein: Q9Y534

CSDC2, Cold shock domain-containing protein C2, humanhuman

Known RBP Predictions only

Length 153 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2Q9Y534 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSDC2Q9Y534 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSDC2Q9Y534 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.74■□□□□ 0.59
CSDC2Q9Y534 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSDC2Q9Y534 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CSDC2Q9Y534 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSDC2Q9Y534 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSDC2Q9Y534 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSDC2Q9Y534 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSDC2Q9Y534 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSDC2Q9Y534 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CSDC2Q9Y534 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSDC2Q9Y534 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSDC2Q9Y534 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSDC2Q9Y534 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.71■□□□□ 0.58
CSDC2Q9Y534 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSDC2Q9Y534 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSDC2Q9Y534 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CSDC2Q9Y534 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CSDC2Q9Y534 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CSDC2Q9Y534 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSDC2Q9Y534 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSDC2Q9Y534 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSDC2Q9Y534 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSDC2Q9Y534 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSDC2Q9Y534 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSDC2Q9Y534 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSDC2Q9Y534 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CSDC2Q9Y534 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSDC2Q9Y534 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSDC2Q9Y534 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSDC2Q9Y534 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSDC2Q9Y534 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.65■□□□□ 0.58
CSDC2Q9Y534 ZNRF2P1-201ENST00000441407 443 ntBASIC18.64■□□□□ 0.57
CSDC2Q9Y534 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSDC2Q9Y534 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.63■□□□□ 0.57
CSDC2Q9Y534 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSDC2Q9Y534 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.62■□□□□ 0.57
CSDC2Q9Y534 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSDC2Q9Y534 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSDC2Q9Y534 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.6■□□□□ 0.57
CSDC2Q9Y534 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSDC2Q9Y534 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSDC2Q9Y534 ST7-AS1-201ENST00000456775 1889 ntBASIC18.6■□□□□ 0.57
CSDC2Q9Y534 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSDC2Q9Y534 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CSDC2Q9Y534 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
CSDC2Q9Y534 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSDC2Q9Y534 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CSDC2Q9Y534 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSDC2Q9Y534 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
CSDC2Q9Y534 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSDC2Q9Y534 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.58■□□□□ 0.56
CSDC2Q9Y534 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CSDC2Q9Y534 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSDC2Q9Y534 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.56■□□□□ 0.56
CSDC2Q9Y534 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSDC2Q9Y534 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSDC2Q9Y534 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSDC2Q9Y534 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSDC2Q9Y534 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSDC2Q9Y534 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CSDC2Q9Y534 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSDC2Q9Y534 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.53■□□□□ 0.56
CSDC2Q9Y534 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSDC2Q9Y534 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CSDC2Q9Y534 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSDC2Q9Y534 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSDC2Q9Y534 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSDC2Q9Y534 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSDC2Q9Y534 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CSDC2Q9Y534 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSDC2Q9Y534 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CSDC2Q9Y534 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSDC2Q9Y534 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSDC2Q9Y534 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CSDC2Q9Y534 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
CSDC2Q9Y534 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSDC2Q9Y534 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSDC2Q9Y534 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSDC2Q9Y534 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSDC2Q9Y534 DYNLL1-208ENST00000550178 581 ntBASIC18.48■□□□□ 0.55
CSDC2Q9Y534 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSDC2Q9Y534 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CSDC2Q9Y534 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSDC2Q9Y534 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CSDC2Q9Y534 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSDC2Q9Y534 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSDC2Q9Y534 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSDC2Q9Y534 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.44■□□□□ 0.54
CSDC2Q9Y534 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSDC2Q9Y534 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CSDC2Q9Y534 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CSDC2Q9Y534 AL135925.1-201ENST00000605920 1701 ntBASIC18.43■□□□□ 0.54
CSDC2Q9Y534 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CSDC2Q9Y534 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSDC2Q9Y534 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSDC2Q9Y534 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSDC2Q9Y534 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSDC2Q9Y534 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms