Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.1■■□□□ 1.77
PCDHGB4Q9UN71 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGB4Q9UN71 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGB4Q9UN71 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGB4Q9UN71 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
PCDHGB4Q9UN71 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHGB4Q9UN71 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHGB4Q9UN71 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGB4Q9UN71 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.05■■□□□ 1.76
PCDHGB4Q9UN71 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
PCDHGB4Q9UN71 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
PCDHGB4Q9UN71 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGB4Q9UN71 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGB4Q9UN71 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGB4Q9UN71 AC120057.4-201ENST00000624722 1615 ntBASIC26.03■■□□□ 1.76
PCDHGB4Q9UN71 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
PCDHGB4Q9UN71 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHGB4Q9UN71 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.01■■□□□ 1.75
PCDHGB4Q9UN71 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHGB4Q9UN71 DYNLL1-208ENST00000550178 581 ntBASIC26.01■■□□□ 1.75
PCDHGB4Q9UN71 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHGB4Q9UN71 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26■■□□□ 1.75
PCDHGB4Q9UN71 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHGB4Q9UN71 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHGB4Q9UN71 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGB4Q9UN71 AC139426.1-201ENST00000568218 2529 ntBASIC25.98■■□□□ 1.75
PCDHGB4Q9UN71 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDHGB4Q9UN71 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHGB4Q9UN71 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.95■■□□□ 1.74
PCDHGB4Q9UN71 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHGB4Q9UN71 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHGB4Q9UN71 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHGB4Q9UN71 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHGB4Q9UN71 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHGB4Q9UN71 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.92■■□□□ 1.74
PCDHGB4Q9UN71 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.91■■□□□ 1.74
PCDHGB4Q9UN71 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHGB4Q9UN71 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.9■■□□□ 1.74
PCDHGB4Q9UN71 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHGB4Q9UN71 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGB4Q9UN71 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
PCDHGB4Q9UN71 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGB4Q9UN71 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGB4Q9UN71 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.85■■□□□ 1.73
PCDHGB4Q9UN71 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGB4Q9UN71 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHGB4Q9UN71 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHGB4Q9UN71 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDHGB4Q9UN71 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHGB4Q9UN71 AP002365.1-201ENST00000603448 772 ntBASIC25.82■■□□□ 1.72
PCDHGB4Q9UN71 AL031258.1-201ENST00000623562 325 ntBASIC25.82■■□□□ 1.72
PCDHGB4Q9UN71 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
PCDHGB4Q9UN71 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHGB4Q9UN71 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHGB4Q9UN71 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGB4Q9UN71 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGB4Q9UN71 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.79■■□□□ 1.72
PCDHGB4Q9UN71 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
PCDHGB4Q9UN71 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDHGB4Q9UN71 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.75■■□□□ 1.71
PCDHGB4Q9UN71 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGB4Q9UN71 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.74■■□□□ 1.71
PCDHGB4Q9UN71 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.73■■□□□ 1.71
PCDHGB4Q9UN71 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGB4Q9UN71 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGB4Q9UN71 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGB4Q9UN71 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGB4Q9UN71 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.71■■□□□ 1.71
PCDHGB4Q9UN71 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
PCDHGB4Q9UN71 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHGB4Q9UN71 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHGB4Q9UN71 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHGB4Q9UN71 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHGB4Q9UN71 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHGB4Q9UN71 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGB4Q9UN71 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGB4Q9UN71 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGB4Q9UN71 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
PCDHGB4Q9UN71 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHGB4Q9UN71 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGB4Q9UN71 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGB4Q9UN71 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.64■■□□□ 1.7
PCDHGB4Q9UN71 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHGB4Q9UN71 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
PCDHGB4Q9UN71 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHGB4Q9UN71 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHGB4Q9UN71 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.63■■□□□ 1.69
PCDHGB4Q9UN71 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGB4Q9UN71 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGB4Q9UN71 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGB4Q9UN71 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.61■■□□□ 1.69
PCDHGB4Q9UN71 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGB4Q9UN71 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGB4Q9UN71 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGB4Q9UN71 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGB4Q9UN71 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHGB4Q9UN71 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHGB4Q9UN71 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
PCDHGB4Q9UN71 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGB4Q9UN71 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms