RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 NISCHQ9Y2I1 1504 aa60.02■■■■■ 7.2
COL13A1-212ENST00000520133 CCDC180Q9P1Z9 1646 aa52.18■■■■■ 5.94
COL13A1-212ENST00000520133 ZCCHC6Q5VYS8 1495 aaKnown RBP50.5■■■■■ 5.67
COL13A1-212ENST00000520133 DCAF1Q9Y4B6 1507 aa49.64■■■■■ 5.54
COL13A1-212ENST00000520133 DCAF8L2P0C7V8 631 aa49.52■■■■■ 5.52
COL13A1-212ENST00000520133 SHROOM4Q9ULL8 1493 aa49.28■■■■■ 5.48
COL13A1-212ENST00000520133 ABCC9O60706 1549 aa48.95■■■■■ 5.43
COL13A1-212ENST00000520133 MYO15BQ96JP2 1530 aa48.89■■■■■ 5.42
COL13A1-212ENST00000520133 NACADO15069 1562 aa48.5■■■■■ 5.35
COL13A1-212ENST00000520133 SCRIBQ14160 1630 aa48.03■■■■■ 5.28
COL13A1-212ENST00000520133 RB1CC1Q8TDY2 1594 aa47.99■■■■■ 5.27
COL13A1-212ENST00000520133 SUPT5HO00267 1087 aaKnown RBP47.66■■■■■ 5.22
COL13A1-212ENST00000520133 UNC13AQ9UPW8 1703 aa47.07■■■■■ 5.13
COL13A1-212ENST00000520133 RSF1Q96T23 1441 aaPredicted RBP46.72■■■■■ 5.07
COL13A1-212ENST00000520133 CECR2Q9BXF3 1484 aa46.58■■■■■ 5.05
COL13A1-212ENST00000520133 BICRAQ9NZM4 1560 aa46.48■■■■■ 5.03
COL13A1-212ENST00000520133 MROH2BQ7Z745 1585 aa46.38■■■■■ 5.02
COL13A1-212ENST00000520133 BAZ1AQ9NRL2 1556 aaPredicted RBP46.35■■■■■ 5.01
COL13A1-212ENST00000520133 PABPN1Q86U42 306 aaKnown RBP eCLIP46.25■■■■■ 4.99
COL13A1-212ENST00000520133 SMARCA4P51532 1647 aa46.07■■■■■ 4.97
COL13A1-212ENST00000520133 WIZO95785 1651 aa46.06■■■■■ 4.96
COL13A1-212ENST00000520133 CHIC1Q5VXU3 224 aa45.81■■■■■ 4.92
COL13A1-212ENST00000520133 TOP2AP11388 1531 aaKnown RBP45.58■■■■■ 4.89
COL13A1-212ENST00000520133 PEG3Q9GZU2 1588 aa45.48■■■■■ 4.87
COL13A1-212ENST00000520133 SMARCA2P51531 1590 aa45.22■■■■■ 4.83
COL13A1-212ENST00000520133 ATAD2BQ9ULI0 1458 aa45.19■■■■■ 4.82
COL13A1-212ENST00000520133 CCDC88BA6NC98 1476 aa45.11■■■■■ 4.81
COL13A1-212ENST00000520133 EIF4G1Q04637 1599 aaKnown RBP45.09■■■■■ 4.81
COL13A1-212ENST00000520133 BAZ1BQ9UIG0 1483 aaKnown RBP45■■■■■ 4.79
COL13A1-212ENST00000520133 TRIM41Q8WV44 630 aa44.8■■■■■ 4.76
COL13A1-212ENST00000520133 NCAPD3P42695 1498 aa44.73■■■■■ 4.75
COL13A1-212ENST00000520133 HMGXB3Q12766 1538 aa44.72■■■■■ 4.75
COL13A1-212ENST00000520133 CC2D2AQ9P2K1 1620 aa44.32■■■■■ 4.69
COL13A1-212ENST00000520133 ABCC8Q09428 1581 aa44.31■■■■■ 4.68
COL13A1-212ENST00000520133 LOC105371045A0A1W2PR82 267 aa44.07■■■■■ 4.65
COL13A1-212ENST00000520133 WRNQ14191 1432 aaPredicted RBP eCLIP44■■■■■ 4.63
COL13A1-212ENST00000520133 FAM9AQ8IZU1 332 aaPredicted RBP43.96■■■■■ 4.63
COL13A1-212ENST00000520133 CFTRP13569 1480 aa43.86■■■■■ 4.61
COL13A1-212ENST00000520133 SYNJ1O43426 1573 aa43.77■■■■■ 4.6
COL13A1-212ENST00000520133 PRDM2Q13029 1718 aa43.74■■■■■ 4.59
COL13A1-212ENST00000520133 CADPSQ9ULU8 1353 aa43.63■■■■■ 4.58
COL13A1-212ENST00000520133 EEA1Q15075 1411 aa43.61■■■■■ 4.57
COL13A1-212ENST00000520133 TOP2BQ02880 1626 aa43.59■■■■■ 4.57
COL13A1-212ENST00000520133 SOGA1O94964 1423 aa43.55■■■■■ 4.56
COL13A1-212ENST00000520133 BIVM-ERCC5R4GMW8 1640 aa43.54■■■■■ 4.56
COL13A1-212ENST00000520133 RUSC2Q8N2Y8 1516 aa43.35■■■■■ 4.53
COL13A1-212ENST00000520133 CUX1P39880 1505 aa43.34■■■■■ 4.53
COL13A1-212ENST00000520133 EHMT2Q96KQ7 1210 aa43.33■■■■■ 4.53
COL13A1-212ENST00000520133 CSRNP3Q8WYN3 585 aa43.32■■■■■ 4.53
COL13A1-212ENST00000520133 LAMC3Q9Y6N6 1575 aa43.18■■■■■ 4.5
COL13A1-212ENST00000520133 FANCD2Q9BXW9 1451 aa43.16■■■■■ 4.5
COL13A1-212ENST00000520133 NESP48681 1621 aa43.09■■■■■ 4.49
COL13A1-212ENST00000520133 GOLGA3Q08378 1498 aa43.02■■■■■ 4.48
COL13A1-212ENST00000520133 KIF21BO75037 1637 aa43■■■■■ 4.47
COL13A1-212ENST00000520133 DNAJC5BQ9UF47 199 aa42.99■■■■■ 4.47
COL13A1-212ENST00000520133 CEP164Q9UPV0 1460 aa42.99■■■■■ 4.47
COL13A1-212ENST00000520133 TNIKQ9UKE5 1360 aa42.96■■■■■ 4.47
COL13A1-212ENST00000520133 KIF27Q86VH2 1401 aa42.86■■■■■ 4.45
COL13A1-212ENST00000520133 DNMBPQ6XZF7 1577 aa42.86■■■■■ 4.45
COL13A1-212ENST00000520133 UBTFP17480 764 aaKnown RBP42.85■■■■■ 4.45
COL13A1-212ENST00000520133 PDS5BQ9NTI5 1447 aa42.84■■■■■ 4.45
COL13A1-212ENST00000520133 FGD5Q6ZNL6 1462 aa42.82■■■■■ 4.45
COL13A1-212ENST00000520133 CEP162Q5TB80 1403 aa42.75■■■■■ 4.43
COL13A1-212ENST00000520133 TOPBP1Q92547 1522 aa42.73■■■■■ 4.43
COL13A1-212ENST00000520133 RAPGEF2Q9Y4G8 1499 aa42.66■■■■■ 4.42
COL13A1-212ENST00000520133 ERICH3Q5RHP9 1530 aa42.65■■■■■ 4.42
COL13A1-212ENST00000520133 CUX2O14529 1486 aa42.64■■■■■ 4.42
COL13A1-212ENST00000520133 PRXQ9BXM0 1461 aa42.64■■■■■ 4.42
COL13A1-212ENST00000520133 KIF21AQ7Z4S6 1674 aa42.63■■■■■ 4.41
COL13A1-212ENST00000520133 URB2Q14146 1524 aaKnown RBP42.57■■■■■ 4.41
COL13A1-212ENST00000520133 POLA1P09884 1462 aaPredicted RBP42.56■■■■■ 4.4
COL13A1-212ENST00000520133 PCGF6Q9BYE7 350 aa42.53■■■■■ 4.4
COL13A1-212ENST00000520133 ABCA10Q8WWZ4 1543 aa42.46■■■■■ 4.39
COL13A1-212ENST00000520133 TRIM26Q12899 539 aaPredicted RBP42.45■■■■■ 4.39
COL13A1-212ENST00000520133 RAD54L2Q9Y4B4 1467 aa42.41■■■■■ 4.38
COL13A1-212ENST00000520133 IGF1RP08069 1367 aa42.39■■■■■ 4.38
COL13A1-212ENST00000520133 CLIP1P30622 1438 aa42.34■■■■■ 4.37
COL13A1-212ENST00000520133 WDR97A6NE52 1622 aa42.28■■■■■ 4.36
COL13A1-212ENST00000520133 MRC2Q9UBG0 1479 aa42.24■■■■■ 4.35
COL13A1-212ENST00000520133 CARMIL1Q5VZK9 1371 aa42.23■■■■■ 4.35
COL13A1-212ENST00000520133 CUL7Q14999 1698 aa42.09■■■■■ 4.33
COL13A1-212ENST00000520133 ABCA5Q8WWZ7 1642 aa42.08■■■■■ 4.33
COL13A1-212ENST00000520133 TARBP1Q13395 1621 aaKnown RBP42.05■■■■■ 4.32
COL13A1-212ENST00000520133 VPS8Q8N3P4 1428 aa42.02■■■■■ 4.32
COL13A1-212ENST00000520133 RANGAP1P46060 587 aaPredicted RBP42■■■■■ 4.31
COL13A1-212ENST00000520133 WDR62O43379 1518 aa42■■■■■ 4.31
COL13A1-212ENST00000520133 GAPVD1Q14C86 1478 aa41.98■■■■■ 4.31
COL13A1-212ENST00000520133 ERCC6Q03468 1493 aa41.98■■■■■ 4.31
COL13A1-212ENST00000520133 PPARGC1BQ86YN6 1023 aaKnown RBP41.97■■■■■ 4.31
COL13A1-212ENST00000520133 TDRD9Q8NDG6 1382 aaKnown RBP41.97■■■■■ 4.31
COL13A1-212ENST00000520133 ARAP1Q96P48 1450 aa41.83■■■■■ 4.29
COL13A1-212ENST00000520133 IFT140Q96RY7 1462 aa41.81■■■■■ 4.28
COL13A1-212ENST00000520133 THOC2Q8NI27 1593 aaKnown RBP41.77■■■■■ 4.28
COL13A1-212ENST00000520133 ARHGAP35Q9NRY4 1499 aa41.76■■■■■ 4.28
COL13A1-212ENST00000520133 PBRM1Q86U86 1689 aa41.75■■■■■ 4.27
COL13A1-212ENST00000520133 APLP2Q06481 763 aa41.72■■■■■ 4.27
COL13A1-212ENST00000520133 CTTNBP2Q8WZ74 1663 aa41.7■■■■■ 4.27
COL13A1-212ENST00000520133 HRCP23327 699 aa41.64■■■■■ 4.26
COL13A1-212ENST00000520133 AQRO60306 1485 aaKnown RBP eCLIP41.63■■■■■ 4.26
COL13A1-212ENST00000520133 GRIN2BQ13224 1484 aa41.59■■■■■ 4.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms