RNA–Protein interactions for RNA: ENST00000410092.7

SPIRE1-203, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-203ENST00000410092 DCAF8L2P0C7V8 631 aa42.93■■■■■ 4.46
SPIRE1-203ENST00000410092 NISCHQ9Y2I1 1504 aa41.43■■■■■ 4.22
SPIRE1-203ENST00000410092 SUPT5HO00267 1087 aaKnown RBP40.48■■■■■ 4.07
SPIRE1-203ENST00000410092 SHROOM4Q9ULL8 1493 aa39.9■■■■□ 3.98
SPIRE1-203ENST00000410092 EHMT2Q96KQ7 1210 aa38.99■■■■□ 3.83
SPIRE1-203ENST00000410092 APLP2Q06481 763 aa38.62■■■■□ 3.77
SPIRE1-203ENST00000410092 FAM9AQ8IZU1 332 aaPredicted RBP38.29■■■■□ 3.72
SPIRE1-203ENST00000410092 PELP1Q8IZL8 1130 aaKnown RBP37.83■■■■□ 3.65
SPIRE1-203ENST00000410092 TRIM41Q8WV44 630 aa37.65■■■■□ 3.62
SPIRE1-203ENST00000410092 TTBK1Q5TCY1 1321 aaPredicted RBP37.64■■■■□ 3.62
SPIRE1-203ENST00000410092 RANGAP1P46060 587 aaPredicted RBP37.5■■■■□ 3.59
SPIRE1-203ENST00000410092 PCGF6Q9BYE7 350 aa37.36■■■■□ 3.57
SPIRE1-203ENST00000410092 ATP1B4Q9UN42 357 aaPredicted RBP37.3■■■■□ 3.56
SPIRE1-203ENST00000410092 UBTFP17480 764 aaKnown RBP37.21■■■■□ 3.55
SPIRE1-203ENST00000410092 ZEB1P37275 1124 aaPredicted RBP36.99■■■■□ 3.51
SPIRE1-203ENST00000410092 CCER1Q8TC90 406 aaPredicted RBP36.94■■■■□ 3.5
SPIRE1-203ENST00000410092 CENPBP07199 599 aaPredicted RBP36.6■■■■□ 3.45
SPIRE1-203ENST00000410092 PPARGC1BQ86YN6 1023 aaKnown RBP36.19■■■■□ 3.38
SPIRE1-203ENST00000410092 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.12■■■■□ 3.37
SPIRE1-203ENST00000410092 HNRNPUL2Q1KMD3 747 aaKnown RBP36.12■■■■□ 3.37
SPIRE1-203ENST00000410092 ERICH6Q7L0X2 663 aa36.1■■■■□ 3.37
SPIRE1-203ENST00000410092 TRIM26Q12899 539 aaPredicted RBP36.03■■■■□ 3.36
SPIRE1-203ENST00000410092 MYT1LQ9UL68 1186 aa36.01■■■■□ 3.36
SPIRE1-203ENST00000410092 NEFLP07196 543 aa35.99■■■■□ 3.35
SPIRE1-203ENST00000410092 ABCC9O60706 1549 aa35.89■■■■□ 3.34
SPIRE1-203ENST00000410092 ITGAEP38570 1179 aa35.88■■■■□ 3.33
SPIRE1-203ENST00000410092 CHIC1Q5VXU3 224 aa35.84■■■■□ 3.33
SPIRE1-203ENST00000410092 YTHDC1Q96MU7 727 aaKnown RBP35.79■■■■□ 3.32
SPIRE1-203ENST00000410092 LOC105371045A0A1W2PR82 267 aa35.71■■■■□ 3.31
SPIRE1-203ENST00000410092 PABPN1Q86U42 306 aaKnown RBP eCLIP35.68■■■■□ 3.3
SPIRE1-203ENST00000410092 POLR3GLQ9BT43 218 aa35.49■■■■□ 3.27
SPIRE1-203ENST00000410092 MYT1Q01538 1121 aa35.42■■■■□ 3.26
SPIRE1-203ENST00000410092 HRCP23327 699 aa35.27■■■■□ 3.24
SPIRE1-203ENST00000410092 FAM50AQ14320 339 aaKnown RBP35.12■■■■□ 3.21
SPIRE1-203ENST00000410092 CNGB1Q14028 1251 aaPredicted RBP34.98■■■■□ 3.19
SPIRE1-203ENST00000410092 SLC4A1APQ9BWU0 796 aaKnown RBP34.96■■■■□ 3.19
SPIRE1-203ENST00000410092 TRIM52Q96A61 297 aa34.93■■■■□ 3.18
SPIRE1-203ENST00000410092 DAXXQ9UER7 740 aaPredicted RBP34.88■■■■□ 3.17
SPIRE1-203ENST00000410092 FBLN2P98095 1184 aa34.85■■■■□ 3.17
SPIRE1-203ENST00000410092 NEUROD1Q13562 356 aa34.61■■■■□ 3.13
SPIRE1-203ENST00000410092 DIEXFQ68CQ4 756 aaKnown RBP34.56■■■■□ 3.12
SPIRE1-203ENST00000410092 CSRNP3Q8WYN3 585 aa34.48■■■■□ 3.11
SPIRE1-203ENST00000410092 SCRIBQ14160 1630 aa34.44■■■■□ 3.1
SPIRE1-203ENST00000410092 ZNF326Q5BKZ1 582 aaKnown RBP34.41■■■■□ 3.1
SPIRE1-203ENST00000410092 P3H3Q8IVL6 736 aa34.38■■■■□ 3.09
SPIRE1-203ENST00000410092 CLSPNQ9HAW4 1339 aa34.29■■■■□ 3.08
SPIRE1-203ENST00000410092 ARID3CA6NKF2 412 aa34.26■■■■□ 3.07
SPIRE1-203ENST00000410092 CDK11AQ9UQ88 783 aaPredicted RBP34.24■■■■□ 3.07
SPIRE1-203ENST00000410092 ZCCHC6Q5VYS8 1495 aaKnown RBP34.24■■■■□ 3.07
SPIRE1-203ENST00000410092 ANP32CO43423 234 aa34.21■■■■□ 3.07
SPIRE1-203ENST00000410092 ZNF777Q9ULD5 760 aaPredicted RBP34.12■■■■□ 3.05
SPIRE1-203ENST00000410092 ZNF316A6NFI3 1004 aaPredicted RBP34.06■■■■□ 3.04
SPIRE1-203ENST00000410092 BCANQ96GW7 911 aa34.04■■■■□ 3.04
SPIRE1-203ENST00000410092 CCDC180Q9P1Z9 1646 aa34.01■■■■□ 3.04
SPIRE1-203ENST00000410092 ZBTB47Q9UFB7 747 aaPredicted RBP33.87■■■■□ 3.01
SPIRE1-203ENST00000410092 NEFMP07197 916 aa33.87■■■■□ 3.01
SPIRE1-203ENST00000410092 ESF1Q9H501 851 aaKnown RBP33.85■■■■□ 3.01
SPIRE1-203ENST00000410092 RTL5Q5HYW3 569 aaPredicted RBP33.84■■■■□ 3.01
SPIRE1-203ENST00000410092 NPM1P06748 294 aaKnown RBP eCLIP33.84■■■■□ 3.01
SPIRE1-203ENST00000410092 CANXP27824 592 aaKnown RBP33.72■■■□□ 2.99
SPIRE1-203ENST00000410092 SLC24A1O60721 1099 aa33.71■■■□□ 2.99
SPIRE1-203ENST00000410092 RB1CC1Q8TDY2 1594 aa33.68■■■□□ 2.98
SPIRE1-203ENST00000410092 STAG3Q9UJ98 1225 aa33.61■■■□□ 2.97
SPIRE1-203ENST00000410092 TONSLQ96HA7 1378 aa33.61■■■□□ 2.97
SPIRE1-203ENST00000410092 CHGAP10645 457 aaKnown RBP33.58■■■□□ 2.97
SPIRE1-203ENST00000410092 GTF3C3Q9Y5Q9 886 aa33.5■■■□□ 2.95
SPIRE1-203ENST00000410092 CHMP7Q8WUX9 453 aaPredicted RBP33.5■■■□□ 2.95
SPIRE1-203ENST00000410092 TSPY4P0CV99 314 aa33.39■■■□□ 2.93
SPIRE1-203ENST00000410092 TSPY10P0CW01 314 aa33.39■■■□□ 2.93
SPIRE1-203ENST00000410092 CHIC2Q9UKJ5 165 aa33.39■■■□□ 2.93
SPIRE1-203ENST00000410092 DCAF1Q9Y4B6 1507 aa33.38■■■□□ 2.93
SPIRE1-203ENST00000410092 MTUS2Q5JR59 1369 aa33.37■■■□□ 2.93
SPIRE1-203ENST00000410092 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.34■■■□□ 2.93
SPIRE1-203ENST00000410092 BCL11AQ9H165 835 aa33.34■■■□□ 2.93
SPIRE1-203ENST00000410092 PLPPR3Q6T4P5 718 aa33.31■■■□□ 2.92
SPIRE1-203ENST00000410092 NACADO15069 1562 aa33.29■■■□□ 2.92
SPIRE1-203ENST00000410092 CLIP1P30622 1438 aa33.24■■■□□ 2.91
SPIRE1-203ENST00000410092 EEA1Q15075 1411 aa33.17■■■□□ 2.9
SPIRE1-203ENST00000410092 RSF1Q96T23 1441 aaPredicted RBP33.16■■■□□ 2.9
SPIRE1-203ENST00000410092 BAZ1BQ9UIG0 1483 aaKnown RBP33.14■■■□□ 2.9
SPIRE1-203ENST00000410092 ACIN1Q9UKV3 1341 aaKnown RBP33.09■■■□□ 2.89
SPIRE1-203ENST00000410092 DDX10Q13206 875 aaKnown RBP33.09■■■□□ 2.89
SPIRE1-203ENST00000410092 GOLGA3Q08378 1498 aa33.05■■■□□ 2.88
SPIRE1-203ENST00000410092 PLEKHD1A6NEE1 506 aa33.03■■■□□ 2.88
SPIRE1-203ENST00000410092 HNRNPUQ00839 825 aaKnown RBP eCLIP33.02■■■□□ 2.88
SPIRE1-203ENST00000410092 WRNQ14191 1432 aaPredicted RBP eCLIP33.02■■■□□ 2.88
SPIRE1-203ENST00000410092 KDM2AQ9Y2K7 1162 aa33.02■■■□□ 2.88
SPIRE1-203ENST00000410092 ANP32AP39687 249 aaKnown RBP33.01■■■□□ 2.88
SPIRE1-203ENST00000410092 FAM9BQ8IZU0 186 aa33.01■■■□□ 2.87
SPIRE1-203ENST00000410092 TMC1Q8TDI8 760 aa32.96■■■□□ 2.87
SPIRE1-203ENST00000410092 KCNH8Q96L42 1107 aa32.96■■■□□ 2.87
SPIRE1-203ENST00000410092 KIF27Q86VH2 1401 aa32.92■■■□□ 2.86
SPIRE1-203ENST00000410092 RRP7BPQ9NSQ0 103 aa32.9■■■□□ 2.86
SPIRE1-203ENST00000410092 WDR43Q15061 677 aaKnown RBP eCLIP32.89■■■□□ 2.86
SPIRE1-203ENST00000410092 CEP162Q5TB80 1403 aa32.86■■■□□ 2.85
SPIRE1-203ENST00000410092 FKBP8Q14318 412 aa32.85■■■□□ 2.85
SPIRE1-203ENST00000410092 SALL2Q9Y467 1007 aaPredicted RBP32.82■■■□□ 2.85
SPIRE1-203ENST00000410092 NPM2Q86SE8 214 aaKnown RBP32.8■■■□□ 2.84
SPIRE1-203ENST00000410092 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.8■■■□□ 2.84
SPIRE1-203ENST00000410092 EIF4G2P78344 907 aaKnown RBP eCLIP32.76■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms