Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CCHCR1Q8TD31 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.15■■■□□ 2.1
CCHCR1Q8TD31 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.14■■■□□ 2.1
CCHCR1Q8TD31 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.13■■■□□ 2.09
CCHCR1Q8TD31 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.13■■■□□ 2.09
CCHCR1Q8TD31 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.13■■■□□ 2.09
CCHCR1Q8TD31 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCHCR1Q8TD31 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCHCR1Q8TD31 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.11■■■□□ 2.09
CCHCR1Q8TD31 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCHCR1Q8TD31 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CCHCR1Q8TD31 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
CCHCR1Q8TD31 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.08■■■□□ 2.09
CCHCR1Q8TD31 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
CCHCR1Q8TD31 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
CCHCR1Q8TD31 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.06■■■□□ 2.08
CCHCR1Q8TD31 ABCB10P1-201ENST00000614297 2181 ntBASIC28.05■■■□□ 2.08
CCHCR1Q8TD31 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCHCR1Q8TD31 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCHCR1Q8TD31 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCHCR1Q8TD31 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CCHCR1Q8TD31 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.01■■■□□ 2.07
CCHCR1Q8TD31 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28■■■□□ 2.07
CCHCR1Q8TD31 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
CCHCR1Q8TD31 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CCHCR1Q8TD31 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CCHCR1Q8TD31 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CCHCR1Q8TD31 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.98■■■□□ 2.07
CCHCR1Q8TD31 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
CCHCR1Q8TD31 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CCHCR1Q8TD31 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
CCHCR1Q8TD31 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CCHCR1Q8TD31 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CCHCR1Q8TD31 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CCHCR1Q8TD31 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CCHCR1Q8TD31 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
CCHCR1Q8TD31 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.92■■■□□ 2.06
CCHCR1Q8TD31 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CCHCR1Q8TD31 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CCHCR1Q8TD31 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.9■■■□□ 2.06
CCHCR1Q8TD31 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
CCHCR1Q8TD31 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
CCHCR1Q8TD31 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.88■■■□□ 2.05
CCHCR1Q8TD31 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.88■■■□□ 2.05
CCHCR1Q8TD31 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
CCHCR1Q8TD31 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.87■■■□□ 2.05
CCHCR1Q8TD31 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.87■■■□□ 2.05
CCHCR1Q8TD31 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CCHCR1Q8TD31 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
CCHCR1Q8TD31 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
CCHCR1Q8TD31 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CCHCR1Q8TD31 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CCHCR1Q8TD31 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
CCHCR1Q8TD31 ABCB10P3-201ENST00000561950 2166 ntBASIC27.83■■■□□ 2.05
CCHCR1Q8TD31 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
CCHCR1Q8TD31 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
CCHCR1Q8TD31 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CCHCR1Q8TD31 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.82■■■□□ 2.04
CCHCR1Q8TD31 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.82■■■□□ 2.04
CCHCR1Q8TD31 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
CCHCR1Q8TD31 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CCHCR1Q8TD31 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.81■■■□□ 2.04
CCHCR1Q8TD31 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CCHCR1Q8TD31 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CCHCR1Q8TD31 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CCHCR1Q8TD31 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CCHCR1Q8TD31 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CCHCR1Q8TD31 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CCHCR1Q8TD31 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
CCHCR1Q8TD31 RARRES2P7-201ENST00000567349 469 ntBASIC27.76■■■□□ 2.03
CCHCR1Q8TD31 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CCHCR1Q8TD31 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CCHCR1Q8TD31 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.75■■■□□ 2.03
CCHCR1Q8TD31 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CCHCR1Q8TD31 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CCHCR1Q8TD31 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CCHCR1Q8TD31 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CCHCR1Q8TD31 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
CCHCR1Q8TD31 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
CCHCR1Q8TD31 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CCHCR1Q8TD31 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.71■■■□□ 2.03
CCHCR1Q8TD31 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CCHCR1Q8TD31 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.68■■■□□ 2.02
CCHCR1Q8TD31 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CCHCR1Q8TD31 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
CCHCR1Q8TD31 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CCHCR1Q8TD31 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.66■■■□□ 2.02
CCHCR1Q8TD31 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
CCHCR1Q8TD31 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
CCHCR1Q8TD31 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CCHCR1Q8TD31 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.64■■■□□ 2.02
CCHCR1Q8TD31 ST7-AS1-201ENST00000456775 1889 ntBASIC27.64■■■□□ 2.02
CCHCR1Q8TD31 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.64■■■□□ 2.01
CCHCR1Q8TD31 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CCHCR1Q8TD31 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
CCHCR1Q8TD31 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.63■■■□□ 2.01
CCHCR1Q8TD31 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CCHCR1Q8TD31 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CCHCR1Q8TD31 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CCHCR1Q8TD31 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms