RNA–Protein interactions for RNA: ENST00000538335.1

LINC01089-207, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 630 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-207ENST00000538335 NISCHQ9Y2I1 1504 aa69.78■■■■■ 8.76
LINC01089-207ENST00000538335 CCDC180Q9P1Z9 1646 aa62.43■■■■■ 7.58
LINC01089-207ENST00000538335 ABCC9O60706 1549 aa61.9■■■■■ 7.5
LINC01089-207ENST00000538335 RB1CC1Q8TDY2 1594 aa59.24■■■■■ 7.07
LINC01089-207ENST00000538335 NACADO15069 1562 aa58.96■■■■■ 7.03
LINC01089-207ENST00000538335 DCAF8L2P0C7V8 631 aa58.74■■■■■ 6.99
LINC01089-207ENST00000538335 MYO15BQ96JP2 1530 aa58.34■■■■■ 6.93
LINC01089-207ENST00000538335 ZCCHC6Q5VYS8 1495 aaKnown RBP57.93■■■■■ 6.86
LINC01089-207ENST00000538335 DCAF1Q9Y4B6 1507 aa57.75■■■■■ 6.83
LINC01089-207ENST00000538335 PABPN1Q86U42 306 aaKnown RBP eCLIP57.69■■■■■ 6.83
LINC01089-207ENST00000538335 UNC13AQ9UPW8 1703 aa57.67■■■■■ 6.82
LINC01089-207ENST00000538335 DNAJC5BQ9UF47 199 aa57.52■■■■■ 6.8
LINC01089-207ENST00000538335 BICRAQ9NZM4 1560 aa57.32■■■■■ 6.77
LINC01089-207ENST00000538335 SHROOM4Q9ULL8 1493 aa56.88■■■■■ 6.7
LINC01089-207ENST00000538335 SCRIBQ14160 1630 aa56.84■■■■■ 6.69
LINC01089-207ENST00000538335 EIF4G1Q04637 1599 aaKnown RBP55.96■■■■■ 6.55
LINC01089-207ENST00000538335 CC2D2AQ9P2K1 1620 aa55.94■■■■■ 6.54
LINC01089-207ENST00000538335 CECR2Q9BXF3 1484 aa55.77■■■■■ 6.52
LINC01089-207ENST00000538335 NCAPD3P42695 1498 aa54.4■■■■■ 6.3
LINC01089-207ENST00000538335 SMARCA4P51532 1647 aa54.3■■■■■ 6.28
LINC01089-207ENST00000538335 ATAD2BQ9ULI0 1458 aa54.27■■■■■ 6.28
LINC01089-207ENST00000538335 SMARCA2P51531 1590 aa54.22■■■■■ 6.27
LINC01089-207ENST00000538335 BAZ1AQ9NRL2 1556 aaPredicted RBP54.2■■■■■ 6.27
LINC01089-207ENST00000538335 HMGXB3Q12766 1538 aa54.04■■■■■ 6.24
LINC01089-207ENST00000538335 BAZ1BQ9UIG0 1483 aaKnown RBP53.82■■■■■ 6.21
LINC01089-207ENST00000538335 PEG3Q9GZU2 1588 aa53.81■■■■■ 6.2
LINC01089-207ENST00000538335 MROH2BQ7Z745 1585 aa53.7■■■■■ 6.19
LINC01089-207ENST00000538335 ERCC6Q03468 1493 aa53.54■■■■■ 6.16
LINC01089-207ENST00000538335 CUX2O14529 1486 aa53.28■■■■■ 6.12
LINC01089-207ENST00000538335 NESP48681 1621 aa53.24■■■■■ 6.11
LINC01089-207ENST00000538335 LAMC3Q9Y6N6 1575 aa53.11■■■■■ 6.09
LINC01089-207ENST00000538335 WIZO95785 1651 aa53.05■■■■■ 6.08
LINC01089-207ENST00000538335 PDS5BQ9NTI5 1447 aa52.86■■■■■ 6.05
LINC01089-207ENST00000538335 RSF1Q96T23 1441 aaPredicted RBP52.82■■■■■ 6.05
LINC01089-207ENST00000538335 CADPSQ9ULU8 1353 aa52.79■■■■■ 6.04
LINC01089-207ENST00000538335 THOC2Q8NI27 1593 aaKnown RBP52.64■■■■■ 6.02
LINC01089-207ENST00000538335 DNAJC5Q9H3Z4 198 aa52.64■■■■■ 6.02
LINC01089-207ENST00000538335 KIF21AQ7Z4S6 1674 aa52.57■■■■■ 6.01
LINC01089-207ENST00000538335 TOP2AP11388 1531 aaKnown RBP52.53■■■■■ 6
LINC01089-207ENST00000538335 MRC2Q9UBG0 1479 aa52.3■■■■■ 5.96
LINC01089-207ENST00000538335 CFTRP13569 1480 aa52.26■■■■■ 5.96
LINC01089-207ENST00000538335 CEP164Q9UPV0 1460 aa52.21■■■■■ 5.95
LINC01089-207ENST00000538335 FANCD2Q9BXW9 1451 aa52.16■■■■■ 5.94
LINC01089-207ENST00000538335 WDR62O43379 1518 aa52.11■■■■■ 5.93
LINC01089-207ENST00000538335 CCDC88BA6NC98 1476 aa51.89■■■■■ 5.9
LINC01089-207ENST00000538335 PRDM2Q13029 1718 aa51.71■■■■■ 5.87
LINC01089-207ENST00000538335 URB2Q14146 1524 aaKnown RBP51.62■■■■■ 5.85
LINC01089-207ENST00000538335 ABCC8Q09428 1581 aa51.28■■■■■ 5.8
LINC01089-207ENST00000538335 TOPBP1Q92547 1522 aa51.2■■■■■ 5.79
LINC01089-207ENST00000538335 IFT140Q96RY7 1462 aa51.16■■■■■ 5.78
LINC01089-207ENST00000538335 DNMBPQ6XZF7 1577 aa51.08■■■■■ 5.77
LINC01089-207ENST00000538335 OSCARQ8IYS5 282 aa50.94■■■■■ 5.75
LINC01089-207ENST00000538335 ZNF608Q9ULD9 1512 aaPredicted RBP50.88■■■■■ 5.74
LINC01089-207ENST00000538335 SUPT5HO00267 1087 aaKnown RBP50.87■■■■■ 5.73
LINC01089-207ENST00000538335 POLA1P09884 1462 aaPredicted RBP50.71■■■■■ 5.71
LINC01089-207ENST00000538335 EIF4G3O43432 1585 aaKnown RBP50.67■■■■■ 5.7
LINC01089-207ENST00000538335 TARBP1Q13395 1621 aaKnown RBP50.65■■■■■ 5.7
LINC01089-207ENST00000538335 SOGA1O94964 1423 aa50.53■■■■■ 5.68
LINC01089-207ENST00000538335 AQRO60306 1485 aaKnown RBP eCLIP50.52■■■■■ 5.68
LINC01089-207ENST00000538335 TRIM41Q8WV44 630 aa50.52■■■■■ 5.68
LINC01089-207ENST00000538335 FGD5Q6ZNL6 1462 aa50.46■■■■■ 5.67
LINC01089-207ENST00000538335 RAD54L2Q9Y4B4 1467 aa50.46■■■■■ 5.67
LINC01089-207ENST00000538335 CUX1P39880 1505 aa50.44■■■■■ 5.67
LINC01089-207ENST00000538335 WDR97A6NE52 1622 aa50.34■■■■■ 5.65
LINC01089-207ENST00000538335 TDRD9Q8NDG6 1382 aaKnown RBP50.31■■■■■ 5.64
LINC01089-207ENST00000538335 FBLN2P98095 1184 aa50.2■■■■■ 5.63
LINC01089-207ENST00000538335 CHD1O14646 1710 aa50.15■■■■■ 5.62
LINC01089-207ENST00000538335 RIMBP3CA6NJZ7 1639 aa50.07■■■■■ 5.61
LINC01089-207ENST00000538335 RIMBP3BA6NNM3 1639 aa50.07■■■■■ 5.61
LINC01089-207ENST00000538335 RIMBP3Q9UFD9 1639 aa50.07■■■■■ 5.61
LINC01089-207ENST00000538335 GRIN2BQ13224 1484 aa50.07■■■■■ 5.61
LINC01089-207ENST00000538335 SNAPC4Q5SXM2 1469 aa50.07■■■■■ 5.61
LINC01089-207ENST00000538335 MAGI1Q96QZ7 1491 aaPredicted RBP50.03■■■■■ 5.6
LINC01089-207ENST00000538335 ARHGEF11O15085 1522 aa50.02■■■■■ 5.6
LINC01089-207ENST00000538335 CHMP7Q8WUX9 453 aaPredicted RBP49.96■■■■■ 5.59
LINC01089-207ENST00000538335 ABCA10Q8WWZ4 1543 aa49.95■■■■■ 5.59
LINC01089-207ENST00000538335 GAPVD1Q14C86 1478 aa49.93■■■■■ 5.58
LINC01089-207ENST00000538335 WRNQ14191 1432 aaPredicted RBP eCLIP49.91■■■■■ 5.58
LINC01089-207ENST00000538335 SYNJ2O15056 1496 aa49.83■■■■■ 5.57
LINC01089-207ENST00000538335 TOP2BQ02880 1626 aa49.82■■■■■ 5.57
LINC01089-207ENST00000538335 BIVM-ERCC5R4GMW8 1640 aa49.78■■■■■ 5.56
LINC01089-207ENST00000538335 PBRM1Q86U86 1689 aa49.77■■■■■ 5.56
LINC01089-207ENST00000538335 ABCA5Q8WWZ7 1642 aa49.77■■■■■ 5.56
LINC01089-207ENST00000538335 SYNJ1O43426 1573 aa49.76■■■■■ 5.56
LINC01089-207ENST00000538335 CYB5RLQ6IPT4 315 aa49.66■■■■■ 5.54
LINC01089-207ENST00000538335 CLASP1Q7Z460 1538 aa49.65■■■■■ 5.54
LINC01089-207ENST00000538335 ARAP1Q96P48 1450 aa49.54■■■■■ 5.52
LINC01089-207ENST00000538335 ADAMTS12P58397 1594 aa49.38■■■■■ 5.5
LINC01089-207ENST00000538335 GRIN2AQ12879 1464 aa49.37■■■■■ 5.49
LINC01089-207ENST00000538335 ERICH3Q5RHP9 1530 aa49.36■■■■■ 5.49
LINC01089-207ENST00000538335 FHAD1B1AJZ9 1412 aa49.35■■■■■ 5.49
LINC01089-207ENST00000538335 NUP160Q12769 1436 aa49.19■■■■■ 5.47
LINC01089-207ENST00000538335 CEP170Q5SW79 1584 aa49.1■■■■■ 5.45
LINC01089-207ENST00000538335 TRHP20396 242 aaPredicted RBP49.01■■■■■ 5.44
LINC01089-207ENST00000538335 KIF27Q86VH2 1401 aa48.97■■■■■ 5.43
LINC01089-207ENST00000538335 SHROOM2Q13796 1616 aa48.87■■■■■ 5.41
LINC01089-207ENST00000538335 ERCC6L2Q5T890 1561 aa48.8■■■■■ 5.4
LINC01089-207ENST00000538335 IGF1RP08069 1367 aa48.79■■■■■ 5.4
LINC01089-207ENST00000538335 JPH4Q96JJ6 628 aa48.74■■■■■ 5.39
LINC01089-207ENST00000538335 CUL7Q14999 1698 aa48.73■■■■■ 5.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms