Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IGKV3D-20A0A0C4DH25 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
IGKV3D-20A0A0C4DH25 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
IGKV3D-20A0A0C4DH25 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.1■□□□□ 0.81
IGKV3D-20A0A0C4DH25 AC006077.2-201ENST00000623591 457 ntBASIC20.1■□□□□ 0.81
IGKV3D-20A0A0C4DH25 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IGKV3D-20A0A0C4DH25 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
IGKV3D-20A0A0C4DH25 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IGKV3D-20A0A0C4DH25 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
IGKV3D-20A0A0C4DH25 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IGKV3D-20A0A0C4DH25 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
IGKV3D-20A0A0C4DH25 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.08■□□□□ 0.81
IGKV3D-20A0A0C4DH25 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
IGKV3D-20A0A0C4DH25 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
IGKV3D-20A0A0C4DH25 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IGKV3D-20A0A0C4DH25 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IGKV3D-20A0A0C4DH25 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
IGKV3D-20A0A0C4DH25 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
IGKV3D-20A0A0C4DH25 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.06■□□□□ 0.8
IGKV3D-20A0A0C4DH25 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IGKV3D-20A0A0C4DH25 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
IGKV3D-20A0A0C4DH25 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IGKV3D-20A0A0C4DH25 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IGKV3D-20A0A0C4DH25 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
IGKV3D-20A0A0C4DH25 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
IGKV3D-20A0A0C4DH25 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.02■□□□□ 0.8
IGKV3D-20A0A0C4DH25 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.02■□□□□ 0.8
IGKV3D-20A0A0C4DH25 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
IGKV3D-20A0A0C4DH25 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
IGKV3D-20A0A0C4DH25 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IGKV3D-20A0A0C4DH25 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.01■□□□□ 0.79
IGKV3D-20A0A0C4DH25 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IGKV3D-20A0A0C4DH25 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IGKV3D-20A0A0C4DH25 AC139426.1-201ENST00000568218 2529 ntBASIC20■□□□□ 0.79
IGKV3D-20A0A0C4DH25 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IGKV3D-20A0A0C4DH25 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IGKV3D-20A0A0C4DH25 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
IGKV3D-20A0A0C4DH25 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.98■□□□□ 0.79
IGKV3D-20A0A0C4DH25 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.97■□□□□ 0.79
IGKV3D-20A0A0C4DH25 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IGKV3D-20A0A0C4DH25 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IGKV3D-20A0A0C4DH25 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.96■□□□□ 0.79
IGKV3D-20A0A0C4DH25 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IGKV3D-20A0A0C4DH25 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
IGKV3D-20A0A0C4DH25 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
IGKV3D-20A0A0C4DH25 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IGKV3D-20A0A0C4DH25 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IGKV3D-20A0A0C4DH25 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IGKV3D-20A0A0C4DH25 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IGKV3D-20A0A0C4DH25 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
IGKV3D-20A0A0C4DH25 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
IGKV3D-20A0A0C4DH25 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IGKV3D-20A0A0C4DH25 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
IGKV3D-20A0A0C4DH25 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IGKV3D-20A0A0C4DH25 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.92■□□□□ 0.78
IGKV3D-20A0A0C4DH25 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IGKV3D-20A0A0C4DH25 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IGKV3D-20A0A0C4DH25 ZNRF2P1-201ENST00000441407 443 ntBASIC19.91■□□□□ 0.78
IGKV3D-20A0A0C4DH25 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
IGKV3D-20A0A0C4DH25 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.9■□□□□ 0.78
IGKV3D-20A0A0C4DH25 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
IGKV3D-20A0A0C4DH25 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
IGKV3D-20A0A0C4DH25 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IGKV3D-20A0A0C4DH25 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.88■□□□□ 0.77
IGKV3D-20A0A0C4DH25 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IGKV3D-20A0A0C4DH25 ST7-AS1-201ENST00000456775 1889 ntBASIC19.88■□□□□ 0.77
IGKV3D-20A0A0C4DH25 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
IGKV3D-20A0A0C4DH25 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
IGKV3D-20A0A0C4DH25 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
IGKV3D-20A0A0C4DH25 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.86■□□□□ 0.77
IGKV3D-20A0A0C4DH25 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
IGKV3D-20A0A0C4DH25 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IGKV3D-20A0A0C4DH25 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
IGKV3D-20A0A0C4DH25 AL161658.1-201ENST00000623641 1967 ntBASIC19.85■□□□□ 0.77
IGKV3D-20A0A0C4DH25 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
IGKV3D-20A0A0C4DH25 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
IGKV3D-20A0A0C4DH25 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IGKV3D-20A0A0C4DH25 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
IGKV3D-20A0A0C4DH25 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IGKV3D-20A0A0C4DH25 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
IGKV3D-20A0A0C4DH25 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IGKV3D-20A0A0C4DH25 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IGKV3D-20A0A0C4DH25 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IGKV3D-20A0A0C4DH25 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IGKV3D-20A0A0C4DH25 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
IGKV3D-20A0A0C4DH25 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IGKV3D-20A0A0C4DH25 DYNLL1-208ENST00000550178 581 ntBASIC19.81■□□□□ 0.76
IGKV3D-20A0A0C4DH25 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IGKV3D-20A0A0C4DH25 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IGKV3D-20A0A0C4DH25 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
IGKV3D-20A0A0C4DH25 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.78■□□□□ 0.76
IGKV3D-20A0A0C4DH25 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.78■□□□□ 0.76
IGKV3D-20A0A0C4DH25 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IGKV3D-20A0A0C4DH25 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IGKV3D-20A0A0C4DH25 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IGKV3D-20A0A0C4DH25 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
IGKV3D-20A0A0C4DH25 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
IGKV3D-20A0A0C4DH25 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
IGKV3D-20A0A0C4DH25 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IGKV3D-20A0A0C4DH25 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms