Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
IGKV3D-20A0A0C4DH25 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
IGKV3D-20A0A0C4DH25 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC24.59■■□□□ 1.53
IGKV3D-20A0A0C4DH25 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
IGKV3D-20A0A0C4DH25 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
IGKV3D-20A0A0C4DH25 HES6-203ENST00000409160 1600 ntTSL 2 BASIC24.26■■□□□ 1.47
IGKV3D-20A0A0C4DH25 AL356512.1-201ENST00000607453 1739 ntBASIC24.18■■□□□ 1.46
IGKV3D-20A0A0C4DH25 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC24.04■■□□□ 1.44
IGKV3D-20A0A0C4DH25 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
IGKV3D-20A0A0C4DH25 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
IGKV3D-20A0A0C4DH25 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC23.73■■□□□ 1.39
IGKV3D-20A0A0C4DH25 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
IGKV3D-20A0A0C4DH25 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC23.58■■□□□ 1.36
IGKV3D-20A0A0C4DH25 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
IGKV3D-20A0A0C4DH25 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
IGKV3D-20A0A0C4DH25 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.35
IGKV3D-20A0A0C4DH25 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
IGKV3D-20A0A0C4DH25 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
IGKV3D-20A0A0C4DH25 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
IGKV3D-20A0A0C4DH25 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
IGKV3D-20A0A0C4DH25 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
IGKV3D-20A0A0C4DH25 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
IGKV3D-20A0A0C4DH25 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
IGKV3D-20A0A0C4DH25 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC23.07■■□□□ 1.28
IGKV3D-20A0A0C4DH25 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
IGKV3D-20A0A0C4DH25 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
IGKV3D-20A0A0C4DH25 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
IGKV3D-20A0A0C4DH25 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
IGKV3D-20A0A0C4DH25 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
IGKV3D-20A0A0C4DH25 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC22.63■■□□□ 1.21
IGKV3D-20A0A0C4DH25 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
IGKV3D-20A0A0C4DH25 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
IGKV3D-20A0A0C4DH25 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC22.56■■□□□ 1.2
IGKV3D-20A0A0C4DH25 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
IGKV3D-20A0A0C4DH25 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
IGKV3D-20A0A0C4DH25 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
IGKV3D-20A0A0C4DH25 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC22.47■■□□□ 1.19
IGKV3D-20A0A0C4DH25 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
IGKV3D-20A0A0C4DH25 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
IGKV3D-20A0A0C4DH25 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
IGKV3D-20A0A0C4DH25 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
IGKV3D-20A0A0C4DH25 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
IGKV3D-20A0A0C4DH25 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC22.24■■□□□ 1.15
IGKV3D-20A0A0C4DH25 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
IGKV3D-20A0A0C4DH25 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
IGKV3D-20A0A0C4DH25 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
IGKV3D-20A0A0C4DH25 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
IGKV3D-20A0A0C4DH25 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
IGKV3D-20A0A0C4DH25 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
IGKV3D-20A0A0C4DH25 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
IGKV3D-20A0A0C4DH25 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC22.06■■□□□ 1.12
IGKV3D-20A0A0C4DH25 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
IGKV3D-20A0A0C4DH25 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
IGKV3D-20A0A0C4DH25 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
IGKV3D-20A0A0C4DH25 ILK-212ENST00000532063 1617 ntTSL 2 BASIC22.02■■□□□ 1.12
IGKV3D-20A0A0C4DH25 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC22.01■■□□□ 1.11
IGKV3D-20A0A0C4DH25 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
IGKV3D-20A0A0C4DH25 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC21.98■■□□□ 1.11
IGKV3D-20A0A0C4DH25 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
IGKV3D-20A0A0C4DH25 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
IGKV3D-20A0A0C4DH25 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
IGKV3D-20A0A0C4DH25 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
IGKV3D-20A0A0C4DH25 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IGKV3D-20A0A0C4DH25 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC21.84■■□□□ 1.09
IGKV3D-20A0A0C4DH25 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC21.83■■□□□ 1.09
IGKV3D-20A0A0C4DH25 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
IGKV3D-20A0A0C4DH25 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
IGKV3D-20A0A0C4DH25 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
IGKV3D-20A0A0C4DH25 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
IGKV3D-20A0A0C4DH25 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IGKV3D-20A0A0C4DH25 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IGKV3D-20A0A0C4DH25 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IGKV3D-20A0A0C4DH25 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
IGKV3D-20A0A0C4DH25 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC21.6■■□□□ 1.05
IGKV3D-20A0A0C4DH25 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
IGKV3D-20A0A0C4DH25 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
IGKV3D-20A0A0C4DH25 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
IGKV3D-20A0A0C4DH25 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC21.55■■□□□ 1.04
IGKV3D-20A0A0C4DH25 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
IGKV3D-20A0A0C4DH25 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
IGKV3D-20A0A0C4DH25 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
IGKV3D-20A0A0C4DH25 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
IGKV3D-20A0A0C4DH25 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
IGKV3D-20A0A0C4DH25 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
IGKV3D-20A0A0C4DH25 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IGKV3D-20A0A0C4DH25 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
IGKV3D-20A0A0C4DH25 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IGKV3D-20A0A0C4DH25 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
IGKV3D-20A0A0C4DH25 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
IGKV3D-20A0A0C4DH25 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
IGKV3D-20A0A0C4DH25 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
IGKV3D-20A0A0C4DH25 AC145285.7-201ENST00000614819 1539 ntBASIC21.41■■□□□ 1.02
IGKV3D-20A0A0C4DH25 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
IGKV3D-20A0A0C4DH25 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
IGKV3D-20A0A0C4DH25 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IGKV3D-20A0A0C4DH25 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
IGKV3D-20A0A0C4DH25 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IGKV3D-20A0A0C4DH25 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
IGKV3D-20A0A0C4DH25 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
IGKV3D-20A0A0C4DH25 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms