RNA–Protein interactions for RNA: ENST00000600059.5

LMTK3-202, Transcript of lemur tyrosine kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LMTK3, Length 5,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMTK3-202ENST00000600059 DCAF8L2P0C7V8 631 aa43.15■■■■■ 4.5
LMTK3-202ENST00000600059 NISCHQ9Y2I1 1504 aa42.56■■■■■ 4.4
LMTK3-202ENST00000600059 SUPT5HO00267 1087 aaKnown RBP41.51■■■■■ 4.24
LMTK3-202ENST00000600059 SHROOM4Q9ULL8 1493 aa41.02■■■■■ 4.16
LMTK3-202ENST00000600059 EHMT2Q96KQ7 1210 aa39.95■■■■□ 3.99
LMTK3-202ENST00000600059 FAM9AQ8IZU1 332 aaPredicted RBP39.08■■■■□ 3.85
LMTK3-202ENST00000600059 PCGF6Q9BYE7 350 aa38.86■■■■□ 3.81
LMTK3-202ENST00000600059 TTBK1Q5TCY1 1321 aaPredicted RBP38.58■■■■□ 3.77
LMTK3-202ENST00000600059 APLP2Q06481 763 aa38.51■■■■□ 3.76
LMTK3-202ENST00000600059 TRIM41Q8WV44 630 aa38.31■■■■□ 3.72
LMTK3-202ENST00000600059 RANGAP1P46060 587 aaPredicted RBP38.06■■■■□ 3.68
LMTK3-202ENST00000600059 CCER1Q8TC90 406 aaPredicted RBP37.74■■■■□ 3.63
LMTK3-202ENST00000600059 PELP1Q8IZL8 1130 aaKnown RBP37.73■■■■□ 3.63
LMTK3-202ENST00000600059 UBTFP17480 764 aaKnown RBP37.65■■■■□ 3.62
LMTK3-202ENST00000600059 ZEB1P37275 1124 aaPredicted RBP37.63■■■■□ 3.61
LMTK3-202ENST00000600059 PPARGC1BQ86YN6 1023 aaKnown RBP37.55■■■■□ 3.6
LMTK3-202ENST00000600059 ATP1B4Q9UN42 357 aaPredicted RBP37.38■■■■□ 3.57
LMTK3-202ENST00000600059 CHIC1Q5VXU3 224 aa37.35■■■■□ 3.57
LMTK3-202ENST00000600059 LOC105371045A0A1W2PR82 267 aa37.32■■■■□ 3.57
LMTK3-202ENST00000600059 CENPBP07199 599 aaPredicted RBP37.27■■■■□ 3.56
LMTK3-202ENST00000600059 TRIM26Q12899 539 aaPredicted RBP37.15■■■■□ 3.54
LMTK3-202ENST00000600059 HRCP23327 699 aa37.02■■■■□ 3.52
LMTK3-202ENST00000600059 YTHDC1Q96MU7 727 aaKnown RBP36.9■■■■□ 3.5
LMTK3-202ENST00000600059 ITGAEP38570 1179 aa36.5■■■■□ 3.43
LMTK3-202ENST00000600059 HNRNPUL2Q1KMD3 747 aaKnown RBP36.45■■■■□ 3.42
LMTK3-202ENST00000600059 ERICH6Q7L0X2 663 aa36.26■■■■□ 3.4
LMTK3-202ENST00000600059 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.24■■■■□ 3.39
LMTK3-202ENST00000600059 NEFLP07196 543 aa36.24■■■■□ 3.39
LMTK3-202ENST00000600059 ABCC9O60706 1549 aa36.24■■■■□ 3.39
LMTK3-202ENST00000600059 PABPN1Q86U42 306 aaKnown RBP eCLIP36.11■■■■□ 3.37
LMTK3-202ENST00000600059 POLR3GLQ9BT43 218 aa35.77■■■■□ 3.32
LMTK3-202ENST00000600059 DIEXFQ68CQ4 756 aaKnown RBP35.76■■■■□ 3.32
LMTK3-202ENST00000600059 CNGB1Q14028 1251 aaPredicted RBP35.65■■■■□ 3.3
LMTK3-202ENST00000600059 FAM50AQ14320 339 aaKnown RBP35.52■■■■□ 3.28
LMTK3-202ENST00000600059 MYT1LQ9UL68 1186 aa35.49■■■■□ 3.27
LMTK3-202ENST00000600059 ZCCHC6Q5VYS8 1495 aaKnown RBP35.31■■■■□ 3.24
LMTK3-202ENST00000600059 NEUROD1Q13562 356 aa35.29■■■■□ 3.24
LMTK3-202ENST00000600059 CSRNP3Q8WYN3 585 aa35.23■■■■□ 3.23
LMTK3-202ENST00000600059 MYT1Q01538 1121 aa35.18■■■■□ 3.22
LMTK3-202ENST00000600059 TRIM52Q96A61 297 aa35.15■■■■□ 3.22
LMTK3-202ENST00000600059 SCRIBQ14160 1630 aa35.08■■■■□ 3.21
LMTK3-202ENST00000600059 GTF3C3Q9Y5Q9 886 aa35.06■■■■□ 3.2
LMTK3-202ENST00000600059 P3H3Q8IVL6 736 aa35■■■■□ 3.19
LMTK3-202ENST00000600059 ZNF316A6NFI3 1004 aaPredicted RBP34.99■■■■□ 3.19
LMTK3-202ENST00000600059 BCANQ96GW7 911 aa34.84■■■■□ 3.17
LMTK3-202ENST00000600059 DAXXQ9UER7 740 aaPredicted RBP34.82■■■■□ 3.16
LMTK3-202ENST00000600059 SLC4A1APQ9BWU0 796 aaKnown RBP34.79■■■■□ 3.16
LMTK3-202ENST00000600059 ZNF326Q5BKZ1 582 aaKnown RBP34.78■■■■□ 3.16
LMTK3-202ENST00000600059 ARID3CA6NKF2 412 aa34.76■■■■□ 3.16
LMTK3-202ENST00000600059 DCAF1Q9Y4B6 1507 aa34.75■■■■□ 3.15
LMTK3-202ENST00000600059 FBLN2P98095 1184 aa34.75■■■■□ 3.15
LMTK3-202ENST00000600059 ANP32CO43423 234 aa34.7■■■■□ 3.15
LMTK3-202ENST00000600059 ACIN1Q9UKV3 1341 aaKnown RBP34.63■■■■□ 3.13
LMTK3-202ENST00000600059 MYO15BQ96JP2 1530 aa34.58■■■■□ 3.13
LMTK3-202ENST00000600059 CCDC180Q9P1Z9 1646 aa34.55■■■■□ 3.12
LMTK3-202ENST00000600059 CLSPNQ9HAW4 1339 aa34.38■■■■□ 3.09
LMTK3-202ENST00000600059 ZNF777Q9ULD5 760 aaPredicted RBP34.32■■■■□ 3.08
LMTK3-202ENST00000600059 RSF1Q96T23 1441 aaPredicted RBP34.3■■■■□ 3.08
LMTK3-202ENST00000600059 RTL5Q5HYW3 569 aaPredicted RBP34.21■■■■□ 3.07
LMTK3-202ENST00000600059 CDK11AQ9UQ88 783 aaPredicted RBP34.16■■■■□ 3.06
LMTK3-202ENST00000600059 DDX10Q13206 875 aaKnown RBP34.12■■■■□ 3.05
LMTK3-202ENST00000600059 TONSLQ96HA7 1378 aa34.08■■■■□ 3.05
LMTK3-202ENST00000600059 CLIP1P30622 1438 aa34.02■■■■□ 3.04
LMTK3-202ENST00000600059 CHIC2Q9UKJ5 165 aa34.01■■■■□ 3.04
LMTK3-202ENST00000600059 FKBP8Q14318 412 aa33.93■■■■□ 3.02
LMTK3-202ENST00000600059 CEP162Q5TB80 1403 aa33.89■■■■□ 3.02
LMTK3-202ENST00000600059 MIER1Q8N108 512 aa33.89■■■■□ 3.02
LMTK3-202ENST00000600059 HNRNPUQ00839 825 aaKnown RBP eCLIP33.86■■■■□ 3.01
LMTK3-202ENST00000600059 HIRIP3Q9BW71 556 aaPredicted RBP33.82■■■■□ 3
LMTK3-202ENST00000600059 SCAF1Q9H7N4 1312 aaKnown RBP33.79■■■■□ 3
LMTK3-202ENST00000600059 RB1CC1Q8TDY2 1594 aa33.79■■■■□ 3
LMTK3-202ENST00000600059 FAM9BQ8IZU0 186 aa33.78■■■■□ 3
LMTK3-202ENST00000600059 GOLGA3Q08378 1498 aa33.73■■■□□ 2.99
LMTK3-202ENST00000600059 CANXP27824 592 aaKnown RBP33.73■■■□□ 2.99
LMTK3-202ENST00000600059 MTUS2Q5JR59 1369 aa33.73■■■□□ 2.99
LMTK3-202ENST00000600059 WRNQ14191 1432 aaPredicted RBP eCLIP33.71■■■□□ 2.99
LMTK3-202ENST00000600059 BCL11AQ9H165 835 aa33.69■■■□□ 2.98
LMTK3-202ENST00000600059 EEA1Q15075 1411 aa33.69■■■□□ 2.98
LMTK3-202ENST00000600059 CECR2Q9BXF3 1484 aa33.64■■■□□ 2.98
LMTK3-202ENST00000600059 SALL2Q9Y467 1007 aaPredicted RBP33.62■■■□□ 2.97
LMTK3-202ENST00000600059 NACADO15069 1562 aa33.59■■■□□ 2.97
LMTK3-202ENST00000600059 TNIKQ9UKE5 1360 aa33.57■■■□□ 2.96
LMTK3-202ENST00000600059 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.57■■■□□ 2.96
LMTK3-202ENST00000600059 RRP7BPQ9NSQ0 103 aa33.56■■■□□ 2.96
LMTK3-202ENST00000600059 CHGAP10645 457 aaKnown RBP33.55■■■□□ 2.96
LMTK3-202ENST00000600059 NPM2Q86SE8 214 aaKnown RBP33.55■■■□□ 2.96
LMTK3-202ENST00000600059 KDM2AQ9Y2K7 1162 aa33.51■■■□□ 2.95
LMTK3-202ENST00000600059 ANP32AP39687 249 aaKnown RBP33.5■■■□□ 2.95
LMTK3-202ENST00000600059 ZBTB47Q9UFB7 747 aaPredicted RBP33.49■■■□□ 2.95
LMTK3-202ENST00000600059 BAZ1BQ9UIG0 1483 aaKnown RBP33.47■■■□□ 2.95
LMTK3-202ENST00000600059 MRS2Q9HD23 443 aa33.45■■■□□ 2.95
LMTK3-202ENST00000600059 SLC24A1O60721 1099 aa33.45■■■□□ 2.94
LMTK3-202ENST00000600059 TSPY4P0CV99 314 aa33.44■■■□□ 2.94
LMTK3-202ENST00000600059 TSPY10P0CW01 314 aa33.44■■■□□ 2.94
LMTK3-202ENST00000600059 TMC1Q8TDI8 760 aa33.43■■■□□ 2.94
LMTK3-202ENST00000600059 NEFMP07197 916 aa33.43■■■□□ 2.94
LMTK3-202ENST00000600059 CHMP7Q8WUX9 453 aaPredicted RBP33.41■■■□□ 2.94
LMTK3-202ENST00000600059 CEP164Q9UPV0 1460 aa33.39■■■□□ 2.94
LMTK3-202ENST00000600059 IRX6P78412 446 aaPredicted RBP33.39■■■□□ 2.94
LMTK3-202ENST00000600059 KIF27Q86VH2 1401 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms