Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 ABCB10P1-201ENST00000614297 2181 ntBASIC20.1■□□□□ 0.81
TRAV21A0A0B4J279 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.1■□□□□ 0.81
TRAV21A0A0B4J279 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV21A0A0B4J279 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV21A0A0B4J279 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAV21A0A0B4J279 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV21A0A0B4J279 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV21A0A0B4J279 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV21A0A0B4J279 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV21A0A0B4J279 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV21A0A0B4J279 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV21A0A0B4J279 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV21A0A0B4J279 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAV21A0A0B4J279 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV21A0A0B4J279 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV21A0A0B4J279 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV21A0A0B4J279 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV21A0A0B4J279 DYNLL1-208ENST00000550178 581 ntBASIC20.01■□□□□ 0.79
TRAV21A0A0B4J279 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20■□□□□ 0.79
TRAV21A0A0B4J279 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV21A0A0B4J279 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV21A0A0B4J279 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRAV21A0A0B4J279 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRAV21A0A0B4J279 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV21A0A0B4J279 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
TRAV21A0A0B4J279 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV21A0A0B4J279 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV21A0A0B4J279 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV21A0A0B4J279 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TRAV21A0A0B4J279 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV21A0A0B4J279 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRAV21A0A0B4J279 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV21A0A0B4J279 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV21A0A0B4J279 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TRAV21A0A0B4J279 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV21A0A0B4J279 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV21A0A0B4J279 ABCB10P3-201ENST00000561950 2166 ntBASIC19.95■□□□□ 0.78
TRAV21A0A0B4J279 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV21A0A0B4J279 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV21A0A0B4J279 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV21A0A0B4J279 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAV21A0A0B4J279 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV21A0A0B4J279 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV21A0A0B4J279 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
TRAV21A0A0B4J279 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV21A0A0B4J279 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV21A0A0B4J279 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV21A0A0B4J279 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TRAV21A0A0B4J279 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAV21A0A0B4J279 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV21A0A0B4J279 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV21A0A0B4J279 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV21A0A0B4J279 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV21A0A0B4J279 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV21A0A0B4J279 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV21A0A0B4J279 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV21A0A0B4J279 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV21A0A0B4J279 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV21A0A0B4J279 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV21A0A0B4J279 AL031258.1-201ENST00000623562 325 ntBASIC19.87■□□□□ 0.77
TRAV21A0A0B4J279 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV21A0A0B4J279 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV21A0A0B4J279 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV21A0A0B4J279 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV21A0A0B4J279 AL161658.1-201ENST00000623641 1967 ntBASIC19.85■□□□□ 0.77
TRAV21A0A0B4J279 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRAV21A0A0B4J279 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV21A0A0B4J279 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
TRAV21A0A0B4J279 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV21A0A0B4J279 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAV21A0A0B4J279 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
TRAV21A0A0B4J279 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV21A0A0B4J279 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRAV21A0A0B4J279 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV21A0A0B4J279 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV21A0A0B4J279 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV21A0A0B4J279 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRAV21A0A0B4J279 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
TRAV21A0A0B4J279 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV21A0A0B4J279 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV21A0A0B4J279 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV21A0A0B4J279 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV21A0A0B4J279 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAV21A0A0B4J279 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV21A0A0B4J279 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV21A0A0B4J279 ST7-AS1-201ENST00000456775 1889 ntBASIC19.79■□□□□ 0.76
TRAV21A0A0B4J279 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TRAV21A0A0B4J279 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV21A0A0B4J279 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TRAV21A0A0B4J279 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV21A0A0B4J279 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV21A0A0B4J279 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV21A0A0B4J279 AP002365.1-201ENST00000603448 772 ntBASIC19.78■□□□□ 0.76
TRAV21A0A0B4J279 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV21A0A0B4J279 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
TRAV21A0A0B4J279 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV21A0A0B4J279 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV21A0A0B4J279 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV21A0A0B4J279 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV21A0A0B4J279 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms