Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV25-1A0A075B6N4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV25-1A0A075B6N4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV25-1A0A075B6N4 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.85■□□□□ 0.77
TRBV25-1A0A075B6N4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV25-1A0A075B6N4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV25-1A0A075B6N4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV25-1A0A075B6N4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TRBV25-1A0A075B6N4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV25-1A0A075B6N4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.82■□□□□ 0.76
TRBV25-1A0A075B6N4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV25-1A0A075B6N4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV25-1A0A075B6N4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV25-1A0A075B6N4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV25-1A0A075B6N4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV25-1A0A075B6N4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV25-1A0A075B6N4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV25-1A0A075B6N4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV25-1A0A075B6N4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV25-1A0A075B6N4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV25-1A0A075B6N4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV25-1A0A075B6N4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC19.75■□□□□ 0.75
TRBV25-1A0A075B6N4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRBV25-1A0A075B6N4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV25-1A0A075B6N4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV25-1A0A075B6N4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV25-1A0A075B6N4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV25-1A0A075B6N4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRBV25-1A0A075B6N4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRBV25-1A0A075B6N4 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV25-1A0A075B6N4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV25-1A0A075B6N4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV25-1A0A075B6N4 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.68■□□□□ 0.74
TRBV25-1A0A075B6N4 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.68■□□□□ 0.74
TRBV25-1A0A075B6N4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBV25-1A0A075B6N4 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV25-1A0A075B6N4 ABCB10P3-201ENST00000561950 2166 ntBASIC19.66■□□□□ 0.74
TRBV25-1A0A075B6N4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV25-1A0A075B6N4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV25-1A0A075B6N4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRBV25-1A0A075B6N4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV25-1A0A075B6N4 ABCB10P1-201ENST00000614297 2181 ntBASIC19.64■□□□□ 0.73
TRBV25-1A0A075B6N4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV25-1A0A075B6N4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.63■□□□□ 0.73
TRBV25-1A0A075B6N4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
TRBV25-1A0A075B6N4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.62■□□□□ 0.73
TRBV25-1A0A075B6N4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV25-1A0A075B6N4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV25-1A0A075B6N4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRBV25-1A0A075B6N4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV25-1A0A075B6N4 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TRBV25-1A0A075B6N4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV25-1A0A075B6N4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV25-1A0A075B6N4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TRBV25-1A0A075B6N4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV25-1A0A075B6N4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV25-1A0A075B6N4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV25-1A0A075B6N4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV25-1A0A075B6N4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV25-1A0A075B6N4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV25-1A0A075B6N4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV25-1A0A075B6N4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV25-1A0A075B6N4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV25-1A0A075B6N4 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.54■□□□□ 0.72
TRBV25-1A0A075B6N4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV25-1A0A075B6N4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV25-1A0A075B6N4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV25-1A0A075B6N4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV25-1A0A075B6N4 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.52■□□□□ 0.72
TRBV25-1A0A075B6N4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV25-1A0A075B6N4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV25-1A0A075B6N4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV25-1A0A075B6N4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TRBV25-1A0A075B6N4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.51■□□□□ 0.71
TRBV25-1A0A075B6N4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.51■□□□□ 0.71
TRBV25-1A0A075B6N4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.5■□□□□ 0.71
TRBV25-1A0A075B6N4 AC006077.2-201ENST00000623591 457 ntBASIC19.49■□□□□ 0.71
TRBV25-1A0A075B6N4 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV25-1A0A075B6N4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.46■□□□□ 0.71
TRBV25-1A0A075B6N4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV25-1A0A075B6N4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRBV25-1A0A075B6N4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV25-1A0A075B6N4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV25-1A0A075B6N4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV25-1A0A075B6N4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.41■□□□□ 0.7
TRBV25-1A0A075B6N4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.41■□□□□ 0.7
TRBV25-1A0A075B6N4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRBV25-1A0A075B6N4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV25-1A0A075B6N4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV25-1A0A075B6N4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV25-1A0A075B6N4 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV25-1A0A075B6N4 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV25-1A0A075B6N4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV25-1A0A075B6N4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV25-1A0A075B6N4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV25-1A0A075B6N4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TRBV25-1A0A075B6N4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV25-1A0A075B6N4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV25-1A0A075B6N4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRBV25-1A0A075B6N4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms